Ggra8818.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8818.t1
Unique NameGgra8818.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length158
Homology
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BLAST of Ggra8818.t1 vs. uniprot
Match: A0A7S3AA63 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AA63_9RHOD)

HSP 1 Score: 57.4 bits (137), Expect = 6.820e-7
Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:   96 ALMPY-NQSAVAVPAMEAERAVQPYTAYRVRRKEGKMRVNDSDKAFGPLLDEM 147
            AL+PY NQ+A  +PAMEAE+  Q  + YRV+R     R+N SD+AFGPLLD+M
Sbjct:  206 ALVPYQNQAAALIPAMEAEKVKQEASNYRVQRGTKPSRINASDQAFGPLLDQM 258
The following BLAST results are available for this feature:
BLAST of Ggra8818.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3AA636.820e-756.60Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:228837..229310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8818.t1Ggra8818.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 228837..229310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8818.t1 ID=Ggra8818.t1|Name=Ggra8818.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=158bp
MQPNYQPSFDNSRDQRIETIKHMFQPPPPQQQQQMQAFYPSTHPFQQSVH
PTQSSQLVPYTPQQQNPFQMVPYAAPQQQQPFGYHNPYVPNASSMALMPY
NQSAVAVPAMEAERAVQPYTAYRVRRKEGKMRVNDSDKAFGPLLDEMKQA
LKKKNTS*
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