Ggra8815.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8815.t1
Unique NameGgra8815.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length227
Homology
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BLAST of Ggra8815.t1 vs. uniprot
Match: A0A2V3IUI2 (Methylglyoxal synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUI2_9FLOR)

HSP 1 Score: 323 bits (828), Expect = 1.010e-109
Identity = 165/223 (73.99%), Postives = 187/223 (83.86%), Query Frame = 0 
Query:    2 EMVDPMLVAKFRANVSVKDRRYRLNKYKQCFVGSEAIDWLVNSGYAKTRREAVDIGQRMRHMGLFDHVVFEHGFEDKNYFYSFNDDEPLAMDDLPDMR---EKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISAIS 221
            +MVD ML+++FRA+V +KDRR+ L KYK CFVGSEA+DWLV +   +TR EAV IG++MR MGLF HV  +H F+DK YFY+FND  PL MDD+ DM    +KKGIALIAHNN K  LIEWAQ HK+ALSKH LVATGTTGSLI + TGL+V LM SGPLGGDQQIGALVAEQ I+VLIFFWDPLTAQPH+SDVKALLRLAVLCNAAIAMN FTADLLISAIS
Sbjct:    3 DMVDAMLISEFRASVPIKDRRHHLIKYKNCFVGSEAVDWLVAANPDRTREEAVKIGEQMRKMGLFHHVHLDHDFKDKRYFYAFNDKVPLTMDDMDDMELDDDKKGIALIAHNNFKGDLIEWAQTHKNALSKHKLVATGTTGSLIKKATGLNVDLMKSGPLGGDQQIGALVAEQTINVLIFFWDPLTAQPHDSDVKALLRLAVLCNAAIAMNTFTADLLISAIS 225
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A3E0UHN4 (Methylglyoxal synthase n=2 Tax=Thalassotalea euphylliae TaxID=1655234 RepID=A0A3E0UHN4_9GAMM)

HSP 1 Score: 153 bits (387), Expect = 6.620e-44
Identity = 73/119 (61.34%), Postives = 95/119 (79.83%), Query Frame = 0 
Query:  101 KKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            +K +AL+AH+N+K++LIEW+  H + L  H L ATGTTG+LI++ TGL V  + SGPLGGDQQIGAL+ EQ+I VLIFFWDPL AQPH+ DVKALLRLA + N  +A N+ +ADLLI++
Sbjct:   11 QKSVALVAHDNMKASLIEWSNTHIEQLKNHQLYATGTTGALIAKQTGLSVSQLISGPLGGDQQIGALITEQKIDVLIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNIASADLLITS 129
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A3Q9GC15 (Methylglyoxal synthase n=1 Tax=Colwellia sp. Arc7-635 TaxID=2497879 RepID=A0A3Q9GC15_9GAMM)

HSP 1 Score: 152 bits (383), Expect = 2.660e-43
Identity = 72/120 (60.00%), Postives = 93/120 (77.50%), Query Frame = 0 
Query:  100 EKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            E K IAL+AH+N+K+ L+ W Q++ D LS H+L ATGTTG+L+S NT L +  + SGPLGGDQQIGAL+ EQ+I +LIFFWDPL AQPH+ DVKALLRLA + N  +A N  TAD +I++
Sbjct:   10 ELKSIALVAHDNMKANLLAWCQRYSDKLSTHELFATGTTGNLLSNNTSLTINKLISGPLGGDQQIGALITEQKIDMLIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNQATADFIINS 129
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BLAST of Ggra8815.t1 vs. uniprot
Match: A0A290QK08 (Methylglyoxal synthase n=1 Tax=Nibricoccus aquaticus TaxID=2576891 RepID=A0A290QK08_9BACT)

HSP 1 Score: 151 bits (382), Expect = 3.540e-43
Identity = 76/126 (60.32%), Postives = 94/126 (74.60%), Query Frame = 0 
Query:   94 DLPDMREKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            +L  +  +K IAL+AH++ K +L+ WA+ H+DAL+KH+L  TGTTG +I+   GL V    SGP+GGDQQIGA +AEQRI VLIFFWDPL AQPH+ DVKALLRLAVL N   AMN  TAD L S+
Sbjct:    7 ELAPLPARKRIALVAHDHEKDSLLAWARVHRDALAKHELFGTGTTGGMIASELGLPVHRFLSGPIGGDQQIGAALAEQRIDVLIFFWDPLAAQPHDPDVKALLRLAVLWNVPCAMNPATADFLFSS 132
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A553FIJ2 (Methylglyoxal synthase n=1 Tax=Thalassomonas sp. M1454 TaxID=2594477 RepID=A0A553FIJ2_9GAMM)

HSP 1 Score: 151 bits (382), Expect = 3.770e-43
Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 0 
Query:  100 EKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            + K I+L+AH+N+K  LI W  KHKD L+KH+L  TGTTG+L+    GLDV  + SGPLGGDQQIGAL+ EQ+I ++IFFWDPL AQPH+ DVKALLRLA + N  +A N  TAD LI++
Sbjct:   10 QHKNISLVAHDNMKPALIAWCIKHKDKLNKHNLYGTGTTGTLLKNKAGLDVNALISGPLGGDQQIGALITEQKIDMMIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNQSTADFLINS 129
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A4P7JWP6 (Methylglyoxal synthase n=2 Tax=unclassified Thalassotalea TaxID=2614972 RepID=A0A4P7JWP6_9GAMM)

HSP 1 Score: 151 bits (382), Expect = 3.770e-43
Identity = 70/118 (59.32%), Postives = 93/118 (78.81%), Query Frame = 0 
Query:  102 KGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            K IAL+AH+N+K+ LI+W ++HK  L KH L ATGTTG+ + +  GLD+  + SGPLGGDQQIGAL+ EQ+I ++IFFWDPL AQPH+ DVKALLRLA + N  +A N+ TAD+LI++
Sbjct:   12 KNIALVAHDNMKAALIDWCKQHKQQLIKHRLFATGTTGAQLEQQAGLDINKLISGPLGGDQQIGALITEQKIDMMIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNISTADMLITS 129
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A0G9LAB3 (Methylglyoxal synthase n=3 Tax=root TaxID=1 RepID=A0A0G9LAB3_9CLOT)

HSP 1 Score: 151 bits (381), Expect = 5.170e-43
Identity = 76/122 (62.30%), Postives = 95/122 (77.87%), Query Frame = 0 
Query:   98 MREKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            M + K IALIAH+N KS LIEWA+++K+ LSKH L  TGTT SLISE TGL V+   SGP+GGDQQIGA +    I +++FFWDPLT+QPH+ DVKALLR+AVL + AIAM+  TAD L+S+
Sbjct:    6 MGKAKKIALIAHDNRKSALIEWAEENKEMLSKHILCGTGTTASLISEKTGLKVQGFKSGPMGGDQQIGAAIVNGEIDLMVFFWDPLTSQPHDPDVKALLRIAVLYDVAIAMSKSTADFLLSS 127
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A369WV64 (Methylglyoxal synthase n=1 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WV64_9GAMM)

HSP 1 Score: 150 bits (380), Expect = 8.280e-43
Identity = 70/122 (57.38%), Postives = 93/122 (76.23%), Query Frame = 0 
Query:   98 MREKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            M   K IAL+AH+N K +L+ WA++H+DALS+H L ATGTTGSL+S   GL+V  + SGP+GGDQQ+GA +AE +I +L+FFWDPL  QPH+ DVKALLR+A + N  +A N+ TAD L S+
Sbjct:    8 MAASKSIALVAHDNRKESLLNWAERHRDALSRHQLFATGTTGSLLSNRLGLEVNALLSGPMGGDQQLGAKIAEGKIELLVFFWDPLEQQPHDPDVKALLRIAAVWNIPVACNLATADFLFSS 129
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: methylglyoxal synthase n=1 Tax=Clostridium guangxiense TaxID=1662055 RepID=UPI001E46F037 (methylglyoxal synthase n=1 Tax=Clostridium guangxiense TaxID=1662055 RepID=UPI001E46F037)

HSP 1 Score: 150 bits (379), Expect = 1.000e-42
Identity = 74/119 (62.18%), Postives = 92/119 (77.31%), Query Frame = 0 
Query:  101 KKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            KK IALIAH+N K  LIEWA+++ D LSKHDL  TGTT  LISE TGL V+   SGP+GGD+QIGA + + +I ++IFFWDPLTAQPH+ DVKALLR++VL +  IAMN  TAD L+ +
Sbjct:    8 KKTIALIAHDNRKQALIEWAKENVDVLSKHDLCGTGTTAKLISEKTGLTVKGFKSGPMGGDEQIGASIVDGKIDIMIFFWDPLTAQPHDPDVKALLRISVLYDIPIAMNQSTADFLMKS 126
[Close]
BLAST of Ggra8815.t1 vs. uniprot
Match: A0A3E0TPQ7 (Methylglyoxal synthase n=1 Tax=Thalassotalea euphylliae TaxID=1655234 RepID=A0A3E0TPQ7_9GAMM)

HSP 1 Score: 150 bits (379), Expect = 1.070e-42
Identity = 71/121 (58.68%), Postives = 97/121 (80.17%), Query Frame = 0 
Query:   99 REKKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDVRLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAVLCNAAIAMNVFTADLLISA 219
            + +K IAL+AH+N+K++LI+W   + + L+ H L ATGTTG+LI++ TGL++  + SGPLGGDQQIGAL+ EQ+I VLIFFWDPL AQPH+ DVKALLRLA + N  +A N+ +ADLLI++
Sbjct:    9 KAQKSIALVAHDNMKASLIDWCHTYLETLNNHQLFATGTTGALIAKQTGLNITPLISGPLGGDQQIGALITEQKIDVLIFFWDPLEAQPHDPDVKALLRLAAVWNIPVACNMASADLLITS 129
The following BLAST results are available for this feature:
BLAST of Ggra8815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUI21.010e-10973.99Methylglyoxal synthase n=1 Tax=Gracilariopsis chor... [more]
A0A3E0UHN46.620e-4461.34Methylglyoxal synthase n=2 Tax=Thalassotalea euphy... [more]
A0A3Q9GC152.660e-4360.00Methylglyoxal synthase n=1 Tax=Colwellia sp. Arc7-... [more]
A0A290QK083.540e-4360.32Methylglyoxal synthase n=1 Tax=Nibricoccus aquatic... [more]
A0A553FIJ23.770e-4360.00Methylglyoxal synthase n=1 Tax=Thalassomonas sp. M... [more]
A0A4P7JWP63.770e-4359.32Methylglyoxal synthase n=2 Tax=unclassified Thalas... [more]
A0A0G9LAB35.170e-4362.30Methylglyoxal synthase n=3 Tax=root TaxID=1 RepID=... [more]
A0A369WV648.280e-4357.38Methylglyoxal synthase n=1 Tax=Motiliproteus coral... [more]
methylglyoxal synthase n=1 Tax=Clostridium guangxiense TaxID=1662055 RepID=UPI001E46F0371.000e-4262.18methylglyoxal synthase n=1 Tax=Clostridium guangxi... [more]
A0A3E0TPQ71.070e-4258.68Methylglyoxal synthase n=1 Tax=Thalassotalea euphy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011607Methylglyoxal synthase-like domainSMARTSM00851MGS_2acoord: 115..208
e-value: 4.9E-15
score: 66.0
IPR011607Methylglyoxal synthase-like domainPFAMPF02142MGScoord: 116..200
e-value: 1.4E-15
score: 57.2
IPR011607Methylglyoxal synthase-like domainPROSITEPS51855MGScoord: 93..226
score: 19.042841
IPR000591DEP domainSMARTSM00049DEP_3coord: 12..86
e-value: 5.9E-21
score: 85.6
IPR000591DEP domainPFAMPF00610DEPcoord: 16..84
e-value: 1.2E-21
score: 76.6
IPR000591DEP domainPROSITEPS50186DEPcoord: 12..86
score: 17.148222
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 5..91
e-value: 1.9E-27
score: 97.1
IPR004363Methylglyoxal synthaseTIGRFAMTIGR00160TIGR00160coord: 101..220
e-value: 5.6E-51
score: 170.3
IPR004363Methylglyoxal synthasePANTHERPTHR30492METHYLGLYOXAL SYNTHASEcoord: 99..219
IPR004363Methylglyoxal synthaseHAMAPMF_00549Methylglyoxal_synthcoord: 102..221
score: 30.317135
IPR004363Methylglyoxal synthaseCDDcd01422MGScoord: 104..217
e-value: 2.15983E-62
score: 188.603
IPR036914Methylglyoxal synthase-like domain superfamilyGENE3D3.40.50.1380coord: 94..226
e-value: 2.2E-53
score: 182.0
IPR036914Methylglyoxal synthase-like domain superfamilySUPERFAMILY52335Methylglyoxal synthase-likecoord: 98..220
IPR018148Methylglyoxal synthase, active sitePROSITEPS01335METHYLGLYOXAL_SYNTHcoord: 155..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 194..217
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..226
NoneNo IPR availableCDDcd04371DEPcoord: 7..82
e-value: 1.88524E-24
score: 90.4777
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 11..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:202153..202833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8815.t1Ggra8815.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 202153..202833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8815.t1 ID=Ggra8815.t1|Name=Ggra8815.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=227bp
MEMVDPMLVAKFRANVSVKDRRYRLNKYKQCFVGSEAIDWLVNSGYAKTR
REAVDIGQRMRHMGLFDHVVFEHGFEDKNYFYSFNDDEPLAMDDLPDMRE
KKGIALIAHNNLKSTLIEWAQKHKDALSKHDLVATGTTGSLISENTGLDV
RLMNSGPLGGDQQIGALVAEQRISVLIFFWDPLTAQPHESDVKALLRLAV
LCNAAIAMNVFTADLLISAISDPKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011607MGS-like_dom
IPR000591DEP_dom
IPR036388WH-like_DNA-bd_sf
IPR004363Methylgl_synth
IPR036914MGS-like_dom_sf
IPR018148Methylglyoxal_synth_AS
IPR036390WH_DNA-bd_sf