Ggra8814.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8814.t1
Unique NameGgra8814.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length390
Homology
BLAST of Ggra8814.t1 vs. uniprot
Match: A0A2V3IX75 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX75_9FLOR)

HSP 1 Score: 193 bits (491), Expect = 2.410e-54
Identity = 164/401 (40.90%), Postives = 227/401 (56.61%), Query Frame = 0
Query:   10 LVTSLRENDNRMEQIEGENFDLKILQWNMNKRAGRH--RDSSSSLIPDAFYDESSDGSRNSNGYTDIMDPDKKIEILKAELNEARDNYEKLLIXXXXXXXXXXXXXXXXXQKGRDYANLSGDXXXXXXXXXXXXXXXXXXXXXLRKELQVERSNASEIK-------------------RAXXXXXXXXXXXXXXXXXXXXXINEIQIKTDGLQMEKEVIKAALTDAESSLSREKERSKTKDDALLRAEQLEYETKQISIKERALREESEKLVSQKAAELESALRKANQYLNDREAISASLKTELENGKTWEEANRMIGDGKMFFAAESEHYVELQKTIQDGESKFADTTKYNPKWREDVAAHLNACLKMLCFMEAETQARRMYVLKCGSSTTVQEPNVEVA 389
            +V S+R  +   ++I+ +NF+LK+    + K+  R+  RDSS+SL P+ +Y    DG R  +  +DIM   +K + +  EL EA+  Y +L                   Q  ++Y +LS         XXXXXXXXX      + +  ++R N S  K                     XXXXXXXXXXXXXXXXXXXXX                               E+ R+K KDDALLRAEQL  E++Q+  K    REE + L+SQKAAELE ALRKAN YL+DREAI ++L+ E++  +TWE+A R++ +GK F AAES  Y +L+KTI++G+SKF+D ++YNP WRE+VA HLNAC KML  ++AET +RR+YVLKCG+     E  + V+
Sbjct:   12 IVESMRTQEADKDKIQNDNFNLKLELDQLRKQMDRNNKRDSSASLQPENYYTFDGDGHRRDSQRSDIMTATEKADAIMVELTEAQVRYAQL--------------WNQFSQLQQEYDHLS-----VKAKXXXXXXXXXSMNFQQKADESLQRQNDSRSKLEILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERTRAKKKDDALLRAEQLAKESRQLLQKXXXXREEKDNLLSQKAAELEGALRKANDYLSDREAIKSTLRAEVQRTETWEDAKRIMEEGKRFIAAESRAYADLKKTIEEGKSKFSDRSEYNPSWREEVATHLNACAKMLSLLQAETLSRRLYVLKCGTPAGGSESKLAVS 393          
BLAST of Ggra8814.t1 vs. uniprot
Match: A0A2V3IP36 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP36_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 5.690e-36
Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 0
Query:  202 MEKEVIKAALTDAESSLSREKERSKTKDDALLRAEQLEYETKQISIKERALREESEKLVSQKAAELESALRKANQYLNDREAISASLKTELENGKTWEEANRMIGDGKMFFAAESEHYVELQKTIQDGESKFADTTKYNPKWREDVAAHLNACLKMLCFME 362
            MEK+VI+AAL  A SSL  E+ R+K KDDA+LRAEQL  E++Q+  +E+ALREE + L+S KAA LE ALRKAN YL+DR+AI ++ + E++  +TWE A  ++ +GK F AAES  Y +L+K +++G+ KF+D T+YNP  R     H     +  C M+
Sbjct:    1 MEKDVIQAALAVARSSLMEERTRAKKKDDAVLRAEQLAKESRQLLQEEKALREEKDNLLSLKAAVLEGALRKANDYLSDRQAIKSTYRAEVQRTETWEHAKLIMEEGKRFIAAESRAYAQLKKIVEEGKFKFSDRTEYNPS-RPRARVHKRYLHEFSCVMK 160          
The following BLAST results are available for this feature:
BLAST of Ggra8814.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX752.410e-5440.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP365.690e-3649.07Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 253..273
NoneNo IPR availableCOILSCoilCoilcoord: 81..122
NoneNo IPR availableCOILSCoilCoilcoord: 127..196
NoneNo IPR availableGENE3D1.10.287.2610coord: 59..228
e-value: 3.3E-5
score: 25.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:200044..201213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8814.t1Ggra8814.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 200044..201213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8814.t1 ID=Ggra8814.t1|Name=Ggra8814.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=390bp
MSESHQRPLLVTSLRENDNRMEQIEGENFDLKILQWNMNKRAGRHRDSSS
SLIPDAFYDESSDGSRNSNGYTDIMDPDKKIEILKAELNEARDNYEKLLI
EMNEIRQENDELAVEADQKGRDYANLSGDFRKKANELQQRKDEYSKKLGA
LRKELQVERSNASEIKRAAEEARREKDEANRRYEASQKQINEIQIKTDGL
QMEKEVIKAALTDAESSLSREKERSKTKDDALLRAEQLEYETKQISIKER
ALREESEKLVSQKAAELESALRKANQYLNDREAISASLKTELENGKTWEE
ANRMIGDGKMFFAAESEHYVELQKTIQDGESKFADTTKYNPKWREDVAAH
LNACLKMLCFMEAETQARRMYVLKCGSSTTVQEPNVEVA*
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