Ggra8811.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8811.t1
Unique NameGgra8811.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length153
Homology
BLAST of Ggra8811.t1 vs. uniprot
Match: A0A2V3IUF0 (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 119 bits (298), Expect = 2.370e-31
Identity = 76/166 (45.78%), Postives = 104/166 (62.65%), Query Frame = 0
Query:    6 SQSHAPRNP-FAPHSHAALLSQKHTTTPP---TIEPVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRFRVTKLAN----------PPAPHPDH----ADAEPRPIQP--AFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITLE 151
            S SH+   P F P  +++ LS  H  TP    T+EP Y +++ +D+ F+Q+ELPGV K+HIS+EI  +HL LSA+RFR +KLA             A   DH    A +EP P  P  AF Y LE+RL++D D +AV+  SY +GILTI IP+V + T+SRKIT+E
Sbjct:    3 SSSHSTLTPWFWPQGYSSALSH-HPRTPSSSQTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSS-TSSRKITIE 166          
BLAST of Ggra8811.t1 vs. uniprot
Match: R7QS04 (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 78.2 bits (191), Expect = 2.640e-15
Identity = 48/127 (37.80%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   34 TIEPVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRFR---VTKLANPPAPHPDHADAEPRPIQP------AFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITLE 151
            T+EP Y ++   +    +IE+PGV K ++S+E+ DN L +  KRFR   + K  + PA   D A     P  P      + VY LE RL   A+ DA++A    DGIL + IP+V ++ T RKI +E
Sbjct:   42 TVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFRRPLIEKKDDDPAAAKDPAAQNGDPAHPGEDPVPSIVYLLEARLPQGANVDAIKADHVGDGILNMTIPMVADKGT-RKIQIE 167          
BLAST of Ggra8811.t1 vs. uniprot
Match: R7Q6X4 (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 72.0 bits (175), Expect = 5.870e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 0
Query:   34 TIEPVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRF--------RVTKLANPPAPH--PDHADAEPRPIQPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITLE 151
            T+EP Y ++        +IE+PGV K ++S+E+ +N L +  KRF          + +A  PA +  PD AD +P P   + VY LE RL   A+ DA++A    DGIL + IP+V ++   RK+ +E
Sbjct:   42 TVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAKDPAQNGDPDQADKDPAP---SIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGP-RKVQIE 165          
BLAST of Ggra8811.t1 vs. uniprot
Match: A0A2R4G0U1 (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 70.5 bits (171), Expect = 2.280e-12
Identity = 40/122 (32.79%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   37 PVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRFRVTKLANPPAPHPDHA-------DA-EPRPIQPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITL 150
            P Y +   +DN  +Q+ELPGV K+HI +E+   +L ++A+RFR +  A P +  PD +       DA + R ++P+ VY +++++ ++ D + ++A  Y  G+L + IP    + T+RKI++
Sbjct:   46 PNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSP-AQPVSQEPDQSTENTGENDANKTRSLKPSHVYKMQVKIGNNVDEEGIKAE-YNHGVLELIIPQ--RKMTTRKISI 163          
BLAST of Ggra8811.t1 vs. uniprot
Match: A0A2V3J651 (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 66.6 bits (161), Expect = 5.180e-11
Identity = 44/122 (36.07%), Postives = 67/122 (54.92%), Query Frame = 0
Query:   37 PVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRFRVTKLANPPAPHPDHA-------DAEPRPI-QPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITL 150
            P Y  Q   DNI +Q+ELPGV K+HI LE+    L ++A+RF+ +  + PP+   + A       DA    + QP+ VY L ++   + D + ++A  Y  GIL I +P+     T+RKI L
Sbjct:   32 PNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKASH-SQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHVKTGTNVDDEGIKAE-YNHGILNIVLPMK-KVNTARKIAL 150          
BLAST of Ggra8811.t1 vs. uniprot
Match: A0A2V3IM19 (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM19_9FLOR)

HSP 1 Score: 62.0 bits (149), Expect = 3.740e-9
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   37 PVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRFRVTKLANPPAPHPDH---------ADAEPRPIQPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPL 138
            P Y +Q   DN  +Q+ELPGV K+HI ++I   +L + A+RFR ++ A   +  P+          AD    P +P+ VY +++ +    D DA++A  Y  G+L++ IPL
Sbjct:   45 PNYEYQRDNDNFHLQVELPGVAKEHIDVKINTGNLTIIARRFRPSQ-AESGSQKPEQSTQVTAENDADVTQSP-KPSHVYKMQVEVGSTVDEDAIKAD-YNHGVLSMVIPL 152          
BLAST of Ggra8811.t1 vs. uniprot
Match: Q7XZ71 (Heat shock protein 16 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ71_GRIJA)

HSP 1 Score: 58.2 bits (139), Expect = 7.400e-8
Identity = 44/127 (34.65%), Postives = 67/127 (52.76%), Query Frame = 0
Query:   27 KHTTTPPTIEPVYHHQTYRDNIFVQIELPGVLKQHISLEILDNHLVLSAKRF-RVTKLA--NPPAPHPDHADAEPRPIQPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITL 150
            +++  P  I P +   +      +Q+ELPGV K+ I +E+    L ++  R+ +VT  A  N  A   D +  EP   +    Y+LE++L  DAD D +   SY +GILT+ IP+V     SRKI L
Sbjct:   22 RNSCRPDRIIPSHFIHSGDKEAMLQVELPGVGKEDIEVEVNRRTLYVNGTRYDQVTSTAAVNNDANEED-SGKEPSEKRVERKYSLEIQLGSDADMDGISFESYNNGILTLKIPIV--HQESRKIDL 145          
The following BLAST results are available for this feature:
BLAST of Ggra8811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IUF02.370e-3145.78SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QS042.640e-1537.80Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7Q6X45.870e-1335.94Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
A0A2R4G0U12.280e-1232.79Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
A0A2V3J6515.180e-1136.07Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IM193.740e-934.23Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
Q7XZ717.400e-834.65Heat shock protein 16 n=1 Tax=Griffithsia japonica... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 46..148
e-value: 9.6E-7
score: 28.9
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 29..152
score: 13.028703
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 6..150
e-value: 3.3E-11
score: 45.1
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 31..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 46..137
e-value: 2.43171E-12
score: 57.1788

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:193341..193799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8811.t1Ggra8811.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 193341..193799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8811.t1 ID=Ggra8811.t1|Name=Ggra8811.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MYAANSQSHAPRNPFAPHSHAALLSQKHTTTPPTIEPVYHHQTYRDNIFV
QIELPGVLKQHISLEILDNHLVLSAKRFRVTKLANPPAPHPDHADAEPRP
IQPAFVYALEMRLSHDADADAVRASSYEDGILTIDIPLVCNRTTSRKITL
ES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone