Ggra881.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra881.t1
Unique NameGgra881.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length238
Homology
BLAST of Ggra881.t1 vs. uniprot
Match: A0A2V3IX06 (Surfeit locus protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX06_9FLOR)

HSP 1 Score: 153 bits (386), Expect = 3.920e-41
Identity = 69/121 (57.02%), Postives = 94/121 (77.69%), Query Frame = 0
Query:    1 MLPKRDTVLYAEQHRDTAELLPNGKLRFTQSGMDFPAHADLKTLQTYACGKAYRRALARRKNEAYDFEQHEPYIVAHRHRDEKHFLYCTLTHSTLPRQKDAVVAHTSGKRFKRRREEARRK 121
            MLP  +  +YA++H D+  LLPNGK+RF Q+GM+FPA+     L+ Y  GKA+RRA+A++ N+AY+F+QH PYI+ H H+D+KHFLYCTLT  TLPR +D +V HT+GKRFKRR +EA +K
Sbjct:   86 MLPTSEAAMYAKEHPDSTTLLPNGKIRFIQTGMEFPANVQTSALKAYVDGKAFRRAVAKKINDAYEFDQHVPYIIPHPHKDKKHFLYCTLTGCTLPRSRDVLVNHTNGKRFKRRFQEAEKK 206          
BLAST of Ggra881.t1 vs. uniprot
Match: R7Q9F3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9F3_CHOCR)

HSP 1 Score: 138 bits (347), Expect = 5.870e-35
Identity = 87/209 (41.63%), Postives = 118/209 (56.46%), Query Frame = 0
Query:    1 MLPKRDTVLYAEQHRDTAELLPNGKLRFTQSGMDFPAHADLKTLQTYACGKAYRRALARRKNEAYDFEQHEPYIVAHRHRDEKHFLYCTLTHSTLPRQKDAVVAHTSGKRFKRRREEARRKSKGTGARIAKRNESGDGDEREAGDAM---RNGG-------------AQDVLNGVVS-SDEGSASGEFEMRDDVDAAADGLDEQEANAE 192
            M  + D   YA +H  +  LLP+GKL+FT+SGM+F A    K L+ YA G AY+RAL  + NE YDF QHEPY+V H+H+D+ HFL+C LT S LPR+KD V+ H +GKRF+R+ +EA R+ +      AKR E      +  G       NGG             A D+L+G++S +DE    G      D DA  DG +E   + E
Sbjct:   91 MPSQSDVARYAAKHPSSTTLLPSGKLQFTKSGMEFAAMTSGKVLEAYANGLAYKRALQLKANEGYDFAQHEPYVVPHKHKDKNHFLFCKLTSSVLPRRKDVVIGHVNGKRFQRKFKEADRQREEAARIAAKRKEKKLARAKSMGKKEGENHNGGEGENXXXXXXXKEAPDLLDGILSDADEDMGDG------DEDANNDGKEEDTGDEE 293          
The following BLAST results are available for this feature:
BLAST of Ggra881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX063.920e-4157.02Surfeit locus protein 2 n=1 Tax=Gracilariopsis cho... [more]
R7Q9F35.870e-3541.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008833Surfeit locus protein 2PFAMPF05477SURF2coord: 16..179
e-value: 1.5E-20
score: 73.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..147
NoneNo IPR availablePANTHERPTHR34348SURFEIT LOCUS PROTEIN 2coord: 19..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:47781..48494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra881.t1Ggra881.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 47781..48494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra881.t1 ID=Ggra881.t1|Name=Ggra881.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=238bp
MLPKRDTVLYAEQHRDTAELLPNGKLRFTQSGMDFPAHADLKTLQTYACG
KAYRRALARRKNEAYDFEQHEPYIVAHRHRDEKHFLYCTLTHSTLPRQKD
AVVAHTSGKRFKRRREEARRKSKGTGARIAKRNESGDGDEREAGDAMRNG
GAQDVLNGVVSSDEGSASGEFEMRDDVDAAADGLDEQEANAEAGCLSGQE
TADCMEVETTAVKGSPNGVQRSLSGTRTESVGGRRHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008833Surf2