Ggra8808.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8808.t1
Unique NameGgra8808.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length225
Homology
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A2V3IUE0 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE0_9FLOR)

HSP 1 Score: 320 bits (820), Expect = 1.260e-108
Identity = 157/223 (70.40%), Postives = 192/223 (86.10%), Query Frame = 0
Query:    1 MTTSILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTRYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINITTA 223
            MTTSILVIGA+GR G++LI+AA +  D PQ+HAFARNP S   EIA++C SVQKGDAL ADQVYDALVAT+ATHIV++IGVPNST+PSTLRGD+A AI +A+ RY  PVKTVI+SALGAS TKIQ+GFGVGMVIY+ILRHLLKDHDRQEA F+DYY ++   LLIVRPTGL +G++GSK+ +FDGQ +TP+L +DR D+AAW+++QI  +GD FGKAINI+ A
Sbjct:    1 MTTSILVIGATGRTGQQLIKAANEHPDHPQVHAFARNPQSFPSEIAEKCTSVQKGDALVADQVYDALVATKATHIVIAIGVPNSTAPSTLRGDSAEAIIEAMKRYPKPVKTVIISALGASDTKIQFGFGVGMVIYYILRHLLKDHDRQEASFLDYYNDNEKGLLIVRPTGLVDGQEGSKVLLFDGQGRTPSLTVDRYDMAAWVVNQIANDGDCFGKAINISKA 223          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A2V3IUG3 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG3_9FLOR)

HSP 1 Score: 287 bits (734), Expect = 1.530e-95
Identity = 141/223 (63.23%), Postives = 179/223 (80.27%), Query Frame = 0
Query:    1 MTTSILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTRYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINITTA 223
            MTTSILV+GASGR G++ I AA    D PQ+HAFARNP SL  +IA++C SVQKGDAL  DQVYDALVAT+ATHIVVSIGVPNS + STLR D+A AI +A+ RY   VKT+IVSALGA G+KIQ+GFG+GM  YFILRH+++DHDRQE  F  YY+E+   LLI+RPT L +G+DG+K+ +FDGQ  TP+  +DR D+A W+++QIC +GD+FG+A++IT A
Sbjct:    1 MTTSILVLGASGRTGQQFINAAYDHPDHPQVHAFARNPQSLPSDIAEKCTSVQKGDALLTDQVYDALVATEATHIVVSIGVPNSAAQSTLRYDSAVAIIEAMRRYKHTVKTIIVSALGAGGSKIQFGFGIGMFYYFILRHVMRDHDRQEDTFDKYYQENKKGLLILRPTLLVDGQDGAKVLLFDGQGHTPSKTVDRYDMAVWVVNQICGDGDRFGEAVHITKA 223          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A2V3J3X2 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X2_9FLOR)

HSP 1 Score: 262 bits (669), Expect = 1.120e-85
Identity = 125/223 (56.05%), Postives = 173/223 (77.58%), Query Frame = 0
Query:    1 MTTSILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTRYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINITTA 223
            M  SIL+IGA+GRMG+ LI AAA++ + P +HAF RNP+SL P +A  C SVQ+G+ALEA+ V  ALV + ATHI+V+IGVPNST+ STLR D+A AIT+A+ R   PVK V+VS++GA GTKI++GFG+G + +FILRH+L DHD QE  F+ +++   + LLIVRPT LTEG+ G+K+ +FDG ++TP++ +DR D+A WI  Q+C +G+ FG+A+NIT A
Sbjct:    1 MAASILIIGANGRMGQHLIYAAARETNKPTIHAFVRNPASLPPPVASVCDSVQRGNALEAEDVRAALVESSATHIIVAIGVPNSTARSTLRADSAKAITEAIERSEQPVKVVVVSSMGAGGTKIKFGFGIGSLTHFILRHVLDDHDHQEERFLSFFENDKDKLLIVRPTELTEGRAGAKVTLFDGDKRTPSMKVDRGDVATWIAGQVCRDGECFGRAVNITRA 223          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A2V3INI8 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI8_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 4.180e-81
Identity = 122/223 (54.71%), Postives = 165/223 (73.99%), Query Frame = 0
Query:    1 MTTSILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTRYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINITTA 223
            MT SIL+IGA+GRMG+ LI AA  Q   P +HAF RNP SL P +A  C SV KGDAL +D V  AL AT ATH+VV++GVP+S   S+LR D+A+ IT+A++R +  V+ V+VS++GA GT+I++ FG+G + +F+L+H+L DHD QE  F+ +++     LLIVRPT LT+G  G K+ +FDGQQKTPTL +DR D++ WI+ QIC EGD FG+A+NIT A
Sbjct:    1 MTASILIIGANGRMGQNLIHAATLQTKKPHIHAFVRNPLSLPPSVASLCYSVHKGDALCSDDVQAALTATSATHVVVAVGVPDSNVLSSLRTDSANTITEAISRSNQTVQVVVVSSIGAGGTRIKFSFGLGTLFHFMLQHVLTDHDHQEERFLRFFENDKERLLIVRPTQLTDGYGGDKVILFDGQQKTPTLKVDRRDVSVWILGQICGEGDCFGRAVNITRA 223          
BLAST of Ggra8808.t1 vs. uniprot
Match: R7QF13 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF13_CHOCR)

HSP 1 Score: 160 bits (405), Expect = 1.140e-45
Identity = 92/219 (42.01%), Postives = 133/219 (60.73%), Query Frame = 0
Query:    5 ILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTRYHS--PVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINIT 221
            +L+IGA+G +GR+LI AA+       LHAF R PS L+   A  CAS+ +GDA  +  V  ALV+T+A+  ++ IG   ST+P+ +R  TA A+   +        VK ++VS+ GA GTKI  GFG+GMV+ ++LRH++KDH  QE  F     +    +LIVRPTGLT+GK       F+   K PT+ IDR DLA +++ +I      +GK I++T
Sbjct:    6 VLLIGATGSLGRQLIRAASSSSGVT-LHAFCRTPSKLSASDASSCASIVRGDARSSSDVRRALVSTKASVAIMCIGEGTSTAPTDVREATAKALMDVIEPGQDLDHVKVMVVSSTGAGGTKIDIGFGIGMVVAYVLRHVMKDHTEQERVFKQRIGDKSR-MLIVRPTGLTDGKATGHTTTFEKHSKPPTVHIDREDLAKFMVGEINRGAKAYGKEISVT 222          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A7R9VGE2 (Hypothetical protein n=6 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VGE2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 5.970e-43
Identity = 85/220 (38.64%), Postives = 133/220 (60.45%), Query Frame = 0
Query:    4 SILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTR--YHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINIT 221
            SILVIGASGR G ++++  ++     ++HAF R+PS +  +  ++C SV KGDA   D + +A+  + +  ++VSIG  +S + S++R  +A A+   + +  YH  V  +IVS+ GA  +KI+ G GVG +I F LRH+L+DH  QE  F      +    +IVR T LT+ K    +  F  ++K+PT+ IDR DLA W++ ++C  G   GK +NIT
Sbjct:    8 SILVIGASGRTGLEILQKLSQDTKKKEVHAFCRDPSKIPDQYKEKCQSVIKGDARSPDDIEEAINDSNSQVVIVSIGNGDSVAKSSVRTASARALADVMEKPKYHH-VHALIVSSTGAGTSKIKVGMGVGKIISFHLRHVLQDHTGQEKAFGPVIDRT----VIVRATALTDNKATGNVKEFGDKEKSPTIKIDRTDLAKWVVKEVCASGPVGGKVVNIT 222          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A7R9VGH1 (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VGH1_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.680e-41
Identity = 80/219 (36.53%), Postives = 129/219 (58.90%), Query Frame = 0
Query:    4 SILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTR-YHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINIT 221
            S+L+IGASGR G +++   ++     ++HA  R+PS +  +  + C SV KGDA   D +  A+  T A  ++VS+G  +S + S +R  +A A+ + + +  +  V+ ++VS+ GA  +KI+ G GVG +I + LRH+LKDH  QE  F      +    +IVR T LT+ K    +  F  ++K+PT+ IDR DLA W++ ++C  G   GK +NIT
Sbjct:    8 SVLIIGASGRTGLEILRQLSQDTKKKEVHAMCRDPSKIPEQYKENCESVIKGDARSPDDIEQAINDTNAQVVIVSVGNGDSVAKSDVRTASARALARVMEKPQYRHVRALVVSSTGAGTSKIKVGMGVGKIISYHLRHVLKDHTGQEKAFGPVSDRT----VIVRATALTDNKATGNVKEFGDKEKSPTIKIDRADLAEWVVKEVCAGGTVGGKVVNIT 222          
BLAST of Ggra8808.t1 vs. uniprot
Match: S0F2U9 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2U9_CHOCR)

HSP 1 Score: 147 bits (371), Expect = 1.430e-40
Identity = 84/221 (38.01%), Postives = 128/221 (57.92%), Query Frame = 0
Query:    4 SILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALT--RYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQFGKAINITT 222
            ++LVIG +G+ G ++I A A     P +HAF R PS L+   A  C SV +GDA  A+ +  AL   +   +VV++G      P+ +R  +A A+  ++        VK V+VS++GA GTK+  GFG+GM++   L+H+L DHDRQE    D   +  N  L++  TGLT G+   ++ +F+G  K P   IDR  +A +I+ ++C     FGKAI+ITT
Sbjct:    5 TLLVIGGNGQTGVEVIRACAASAAKPPVHAFCRTPSKLSESDAAHCVSVIEGDARSAEDIARALEQAKPDAVVVAVGRSEDLGPTDVRAASAKALMDSVAPGEKFDQVKIVVVSSVGAGGTKLHIGFGIGMLLGMRLKHVLADHDRQEKEIWDRLADQKNRALVLHTTGLTTGQPAGEVCIFEG--KIPHPRIDRAVVARFIVAELCGTCPNFGKAISITT 223          
BLAST of Ggra8808.t1 vs. uniprot
Match: B5Y5A0 (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5A0_PHATC)

HSP 1 Score: 141 bits (355), Expect = 3.670e-38
Identity = 86/221 (38.91%), Postives = 124/221 (56.11%), Query Frame = 0
Query:    4 SILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTR-YHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQF--GKAINIT 221
            SILVIGA+GR G + +   A     P +HAF RN S L+     +C S+ +GDA  AD +  AL  + AT +++SIG  +S   + +R  +  A+ Q L    +  V+T+++S+ GA  ++I  G G+G +I F LRH+LKDH  QEA F        N   IVR + LT+     KL      +K  T+  DR DLAAWI++QIC   D    G+A+N+T
Sbjct:    6 SILVIGATGRTGLECVRQFAALSPNPFIHAFCRNKSKLSIADQNRCTSIIEGDARSADNLERALADSSATDVILSIGNGDSIKRTDIRTASGKALVQVLKLPAYKKVRTLVISSSGAGSSQIVVGMGIGKLISFHLRHILKDHTDQEAAFYSIR----NRTTIVRASALTDNAATGKLVEHGDHEKALTIKTDRADLAAWIVNQICDTDDSLALGRAVNVT 222          
BLAST of Ggra8808.t1 vs. uniprot
Match: A0A7S2EVM8 (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVM8_TRICV)

HSP 1 Score: 140 bits (354), Expect = 5.470e-38
Identity = 83/222 (37.39%), Postives = 132/222 (59.46%), Query Frame = 0
Query:    4 SILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCASVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQALTR--YHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEACFVDYYKESPND-LLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLAAWIMDQICVEGDQ-FGKAINIT 221
            S+LV+GA+GR G +++   A  ++ P +HAF RNP  L+      CASV  GDA  ++ ++ A+  T A  +VV +G  + T  + +R  +A A+   L +  YH  V+ V+VS+ GA  ++I  G G+G +I + LR++L DH  QEA F     E+ N+  +++RPT LT+GK   K   F  ++K  T+ IDR D+AA+ +++IC +     GK +NIT
Sbjct:    9 SVLVLGATGRTGLEIVRQLAHHKNKPAVHAFCRNPKKLSSHDTTLCASVLSGDARSSEDLHRAVEETNADVVVVCVGNGDGTKKTDIRTASAQALVDVLKKSPYHH-VRVVVVSSNGARKSRIIVGMGIGKLISYHLRYVLADHTGQEAAF-----ETMNERTVVIRPTSLTDGKAKGKFVEFGDKEKPRTIKIDRSDVAAYAVEEICGKTTSPAGKVVNIT 224          
The following BLAST results are available for this feature:
BLAST of Ggra8808.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IUE01.260e-10870.40NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3IUG31.530e-9563.23NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3J3X21.120e-8556.05NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3INI84.180e-8154.71NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
R7QF131.140e-4542.01NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A7R9VGE25.970e-4338.64Hypothetical protein n=6 Tax=Pseudictyota dubia Ta... [more]
A0A7R9VGH12.680e-4136.53Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
S0F2U91.430e-4038.01NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
B5Y5A03.670e-3838.91Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2EVM85.470e-3837.39Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 9..206
e-value: 4.8E-18
score: 65.7
NoneNo IPR availableGENE3D3.40.50.720coord: 2..215
e-value: 1.4E-22
score: 82.2
NoneNo IPR availablePANTHERPTHR43355FLAVIN REDUCTASE (NADPH)coord: 3..210
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 3..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:188342..189016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8808.t1Ggra8808.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 188342..189016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8808.t1 ID=Ggra8808.t1|Name=Ggra8808.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bp
MTTSILVIGASGRMGRKLIEAAAKQRDPPQLHAFARNPSSLAPEIAQQCA
SVQKGDALEADQVYDALVATQATHIVVSIGVPNSTSPSTLRGDTAHAITQ
ALTRYHSPVKTVIVSALGASGTKIQYGFGVGMVIYFILRHLLKDHDRQEA
CFVDYYKESPNDLLIVRPTGLTEGKDGSKLYMFDGQQKTPTLWIDRLDLA
AWIMDQICVEGDQFGKAINITTAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf