Ggra8806.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8806.t1
Unique NameGgra8806.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Homology
BLAST of Ggra8806.t1 vs. uniprot
Match: A0A2V3IUC6 (CMD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUC6_9FLOR)

HSP 1 Score: 343 bits (879), Expect = 9.700e-118
Identity = 165/220 (75.00%), Postives = 196/220 (89.09%), Query Frame = 0
Query:    1 MSNLYPLLAKLPKAPPTICTQFRTILLAVAHVAGGDVHGVTSAFRYIDPQHHKKAYELAIVQAMPFIGIPRSLHAAAALQVLGVVGDPEQSTLASIADLEQKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEVQMTVEHARVLADEDDWRSAEAVMQTWDRARYAL 220
            MS LYPLL+KLPKAP TIC QFRTILLAV HVA GDVHGVTSAF+++D   H K YELAIVQAMPF+GIPR+LHAAA+L+V GVVG  ++S + SI +L ++G+ TFN+IYGRNA RV++RL+QFHPFVEQW+MTCNYGAMLSR+DA+LRERELAAVAALS+D+CA+VQLASHIRGA KVGASY+EV+MTVEHARVL  EDDW +AEAV+Q ++RARYAL
Sbjct:    1 MSKLYPLLSKLPKAPSTICPQFRTILLAVGHVARGDVHGVTSAFQHLDGSFHNKGYELAIVQAMPFVGIPRALHAAASLEVAGVVGHADESRMVSIGELRERGDSTFNEIYGRNALRVKRRLRQFHPFVEQWIMTCNYGAMLSREDASLRERELAAVAALSMDRCAAVQLASHIRGALKVGASYEEVRMTVEHARVLTSEDDWSTAEAVLQRYERARYAL 220          
BLAST of Ggra8806.t1 vs. uniprot
Match: A0A3N5Q006 (Uncharacterized protein n=1 Tax=Ignavibacteriales bacterium TaxID=2049428 RepID=A0A3N5Q006_9BACT)

HSP 1 Score: 70.1 bits (170), Expect = 3.090e-11
Identity = 48/148 (32.43%), Postives = 83/148 (56.08%), Query Frame = 0
Query:   53 KKAYELAIVQAMPFIGIPRSLHAAAAL-QVLGVVGDPEQSTLASIADLEQKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEVQMTVEHARVLAD 199
            +K YE+ ++Q+  F G P +L A     ++       ++  L SI  L+++GE T  KIYG    ++ + +  F P + ++++   YG +LSR+  +L+ERELA ++ LSV K    QL SHI GA+++G     V   ++  R+L +
Sbjct:   41 RKIYEV-LLQSYLFAGFPSALIALKTFSKIFPAFRTNKEILLYSI--LKKRGEKTCKKIYGDKFNKLIENVNSFSPDLAEYIIIEGYGKILSRNQLSLKERELAIISVLSVLKYEE-QLYSHINGAYRLGIKIPVVCELIDSLRILGN 184          
BLAST of Ggra8806.t1 vs. uniprot
Match: A0A2D5XR95 (CMD domain-containing protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XR95_9BACT)

HSP 1 Score: 67.4 bits (163), Expect = 3.250e-10
Identity = 55/176 (31.25%), Postives = 82/176 (46.59%), Query Frame = 0
Query:   14 APPTICTQFRTILLAVAHVAGGDVHGVTSAFRYIDPQHHKKAYELAIVQAMPFIGIPRSLHAAAALQVLGVVGD--PEQSTLASIADLEQKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEV 187
            AP       R + L +A +  GD H +    R   P    + +  A++Q+  F GIPR + A A L   G +    PE+     I    ++G+  F++IYG     V + L + HP +    +   Y  +LSR       REL AV AL+       QLASH RGA ++GA  +E+
Sbjct:    4 APGLTLETERLVRLTIA-ICQGDWHSLRILRREAPPGEPDRGWREALLQSHLFAGIPRMVEACAVLLAEGGLDSCGPEEIEAQPIDP--ERGQRLFDEIYGDTGPAVTEALARAHPEILAITLDHAYKRVLSRPGLAGATRELLAVGALAAGNQRR-QLASHARGALRLGALPEEI 175          
BLAST of Ggra8806.t1 vs. uniprot
Match: A0A7W7VSL3 (4-carboxymuconolactone decarboxylase n=1 Tax=Kitasatospora kifunensis TaxID=58351 RepID=A0A7W7VSL3_KITKI)

HSP 1 Score: 62.8 bits (151), Expect = 3.710e-8
Identity = 44/146 (30.14%), Postives = 72/146 (49.32%), Query Frame = 0
Query:   60 IVQAMPFIGIPRSLHA-AAALQVLGVVGDPEQSTLASIA-----------DLEQKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEVQMTVEH 193
            I+  + + G+P +L+    A +V      PEQ+ L  +A           D  ++G     +I G    +V   L+   P + ++++  ++G + SR   TL+ERELA+VAA +    A+ QL  HI G   VG S +EV  T+ H
Sbjct:  108 IIHMLVYAGVPAALNGMTVAREVFAERPSPEQTPLGDLARSQVRPAQTSEDRYRRGLAALKEIDGHAGEQVVAALQDIAPDLGRYIIEFSFGDIYSRTGLTLKERELASVAACTALGTAAPQLRVHIHGLLNVGGSREEVVETITH 253          
BLAST of Ggra8806.t1 vs. uniprot
Match: F4CE69 (Carboxymuconolactone decarboxylase n=1 Tax=Sphingobacterium sp. (strain 21) TaxID=743722 RepID=F4CE69_SPHS2)

HSP 1 Score: 61.6 bits (148), Expect = 9.590e-8
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 0
Query:   60 IVQAMPFIGIPRSLHAAAA-LQVL------GVVGDPEQS-TLASIADLEQKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLRERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEVQ 188
            I+Q   + G P S++A  A ++VL      G+  D  +S T+ S  D  + GE T +K+    A +++     F P + ++ +   Y  +LSRD+ +LR RE+A VAAL+    A  QL  HI  A  VG S  EV+
Sbjct:  121 ILQMSVYSGFPSSINAMNAFMEVLDERQNQGIKDDIGKSPTVLSQTDRRKLGEQTLSKLDSVQADKMKAAYNDFSPELLKFTLEYGYADILSRDNLSLRHREIATVAALTALGNAQPQLKFHINAALNVGVSEIEVK 257          
The following BLAST results are available for this feature:
BLAST of Ggra8806.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IUC69.700e-11875.00CMD domain-containing protein n=1 Tax=Gracilariops... [more]
A0A3N5Q0063.090e-1132.43Uncharacterized protein n=1 Tax=Ignavibacteriales ... [more]
A0A2D5XR953.250e-1031.25CMD domain-containing protein n=2 Tax=Planctomycet... [more]
A0A7W7VSL33.710e-830.144-carboxymuconolactone decarboxylase n=1 Tax=Kitas... [more]
F4CE699.590e-834.31Carboxymuconolactone decarboxylase n=1 Tax=Sphingo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003779Carboxymuconolactone decarboxylase-likePFAMPF02627CMDcoord: 131..210
e-value: 2.0E-8
score: 34.2
IPR029032AhpD-likeGENE3D1.20.1290.10coord: 21..216
e-value: 7.4E-28
score: 99.6
IPR029032AhpD-likeSUPERFAMILY69118AhpD-likecoord: 99..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:175847..176509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8806.t1Ggra8806.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 175847..176509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8806.t1 ID=Ggra8806.t1|Name=Ggra8806.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MSNLYPLLAKLPKAPPTICTQFRTILLAVAHVAGGDVHGVTSAFRYIDPQ
HHKKAYELAIVQAMPFIGIPRSLHAAAALQVLGVVGDPEQSTLASIADLE
QKGEHTFNKIYGRNAYRVRKRLKQFHPFVEQWVMTCNYGAMLSRDDATLR
ERELAAVAALSVDKCASVQLASHIRGAFKVGASYDEVQMTVEHARVLADE
DDWRSAEAVMQTWDRARYAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003779CMD-like
IPR029032AhpD-like