Ggra8803.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8803.t1
Unique NameGgra8803.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length162
Homology
BLAST of Ggra8803.t1 vs. uniprot
Match: A0A2R4G0U1 (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 102 bits (253), Expect = 1.860e-24
Identity = 58/142 (40.85%), Postives = 87/142 (61.27%), Query Frame = 0
Query:   20 LSDQVKRSFESSGRPLHKIPNFEYHRKYDSLSLEVELPGVQKEHIEIELRGPELCIAAHRFKSSGM--VVQEREERTECHGDDEMNMDEGKKASLVYVLTIPLAKAGEYVPEAGIKAEQNDGILKMFVPLKRMDGVRQIAIT 159
            L+D++     +  R  +++PN+EY+R  D+  L+VELPGV KEHIE+E+    L I A RF+SS    V QE ++ TE  G+++ N     K S VY + +   K G  V E GIKAE N G+L++ +P ++M   R+I+IT
Sbjct:   27 LADRLGTVHSNRDRTNYQVPNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSPAQPVSQEPDQSTENTGENDANKTRSLKPSHVYKMQV---KIGNNVDEEGIKAEYNHGVLELIIPQRKMT-TRKISIT 164          
BLAST of Ggra8803.t1 vs. uniprot
Match: A0A2V3J651 (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 2.090e-23
Identity = 56/145 (38.62%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   17 QHHLSDQVKRSFESSGRPLHKIPNFEYHRKYDSLSLEVELPGVQKEHIEIELRGPELCIAAHRFKSSGMVV--QEREERTECHGDDEMNMDEGKKASLVYVLTIPLAKAGEYVPEAGIKAEQNDGILKMFVPLKRMDGVRQIAIT 159
            Q   +D+ +     + R ++K PN+E+ R  D+++L+VELPGV KEHI++E+   +L I A RFK+S      +E E+ TE  G  + +  E  + S VY L +   K G  V + GIKAE N GIL + +P+K+++  R+IA+T
Sbjct:   10 QRRFADRSENVCLKTNRTIYKAPNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKASHSQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHV---KTGTNVDDEGIKAEYNHGILNIVLPMKKVNTARKIALT 151          
BLAST of Ggra8803.t1 vs. uniprot
Match: A0A2V3J372 (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J372_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 2.570e-18
Identity = 48/140 (34.29%), Postives = 74/140 (52.86%), Query Frame = 0
Query:   20 LSDQVKRSFESSGRPLHKIPNFEYHRKYDSLSLEVELPGVQKEHIEIELRGPELCIAAHRFKSSGMVVQEREERTECHGDDEMNMDEGKKASLVYVLTIPLAKAGEYVPEAGIKAEQNDGILKMFVPLKRMDGVRQIAIT 159
            L+D+V  ++  + R   ++PN+EY R  D ++L+VELPGV KEHI++E+   +L I A R + S      +E                       +  + + +    V + GIKAE N GIL M +PLK++D  R+IAIT
Sbjct:   27 LADRVVNAYPITDRTTIQVPNYEYQRNNDKITLQVELPGVAKEHIDVEMNSGKLTITARRLRLSHAQPSSKESXXXXXXXXXXXXXXXXXXXXXXLYKLQV-RISTNVDDEGIKAEYNHGILNMILPLKKIDSARRIAIT 165          
BLAST of Ggra8803.t1 vs. uniprot
Match: A0A2V3IM19 (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM19_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 3.450e-18
Identity = 48/127 (37.80%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   36 HKIPNFEYHRKYDSLSLEVELPGVQKEHIEIELRGPELCIAAHRFKSSGMVV--QEREERTECHGDDEMNMDEGKKASLVYVLTIPLAKAGEYVPEAGIKAEQNDGILKMFVPLKRMDGVRQIAITQ 160
            +++PN+EY R  D+  L+VELPGV KEHI++++    L I A RF+ S      Q+ E+ T+   +++ ++ +  K S VY + +   + G  V E  IKA+ N G+L M +PLK++   R IAIT+
Sbjct:   42 YQVPNYEYQRDNDNFHLQVELPGVAKEHIDVKINTGNLTIIARRFRPSQAESGSQKPEQSTQVTAENDADVTQSPKPSHVYKMQV---EVGSTVDEDAIKADYNHGVLSMVIPLKKISA-RTIAITE 164          
The following BLAST results are available for this feature:
BLAST of Ggra8803.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2R4G0U11.860e-2440.85Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
A0A2V3J6512.090e-2338.62Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3722.570e-1834.29Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A2V3IM193.450e-1837.80Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 38..160
e-value: 2.3E-11
score: 45.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 32..158
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 32..161
score: 10.127913

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:169774..170259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8803.t1Ggra8803.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 169774..170259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8803.t1 ID=Ggra8803.t1|Name=Ggra8803.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=162bp
MHPLSPVSFANCKPCIQHHLSDQVKRSFESSGRPLHKIPNFEYHRKYDSL
SLEVELPGVQKEHIEIELRGPELCIAAHRFKSSGMVVQEREERTECHGDD
EMNMDEGKKASLVYVLTIPLAKAGEYVPEAGIKAEQNDGILKMFVPLKRM
DGVRQIAITQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom