Ggra8801.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8801.t1
Unique NameGgra8801.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length501
Homology
BLAST of Ggra8801.t1 vs. uniprot
Match: A0A2V3IUF9 (Dynein alpha chain, flagellar outer arm n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF9_9FLOR)

HSP 1 Score: 526 bits (1356), Expect = 6.280e-181
Identity = 286/520 (55.00%), Postives = 364/520 (70.00%), Query Frame = 0
Query:    1 MTNLLDTPIVLVFAGEDESGHLLNDMYALHVERREWKQISYAPGPRPLPRLLHTAVAISSTLLVVIGGDTWESTDSPEAKISPTTALNDIWVFDYSDSSWQQIEDTGSIKLPFLSCSSAVFGRAKSQVPGVYIFGGYSRDKTYFNVVYRLRISDWKLEVLPHVEKDANGKKRIIDSNGDDGLKENEQHGERII--PRDRESHGAIWLPGIGMLVVGGDGGVSILGDCWLFCQHPDDLQSWRWQELRLVPAGNRPGNKLPRLAGHSLLSLPTNTLKVMVWGGILNTGQDVMASNVSYIIDLDKANIAQTVRVTNTGRAPKTGRILHGLIRSRDMLFAFGGCDSDGNIQIGTQHGRLLPNFKAPNEAASYFGSEATKMAIHGTHSEKSDEDNM-----------KSTEAEGKKGS--STSAARTPLTGKVLEVMDMGLLVSIEIGGKPFKGVLVAHEAQKDSSMIDVSGEKQKANGQKSKSSDIKPSKRPKLDAAAEALPDSPSKLRPK-----RAEVIDIE 500
            MT LL+TP++++F GEDE+G L NDM+ LHVERR+W  ++YA GP+P PRLLHTAVAISS +L++IGG+TWE+  +   ++SPT A+NDIWVFDY DSSW++I  +   +LP LSC SAVFGRAK QVPGVYIFGG+ R +   +VVY+LR SDWKLE +    +  N KKR  D++   G   N    E+I   PR+RESHGAIWLPG GMLVVGGDGG SILGDCWLF Q   D Q+WRW+E+ L P G +  N+LP LAGHSL++LPT+T++V+VWGGILN+GQ+VM S  SY+IDLD+ + A T RV N G+ P TGRILHG  R+ D+LFA GGCD+DGN+  GTQ+GRLLP  KA  +AA +FG +A + A+ G    K+D +N            K  +A+  K +  +   +R P  GKVLEV DMGLLVSI I GKPFKGVLV +         + + +K + +GQKSK  +  P K+PKLD AAEALPDSP  +RPK     R EVI +E
Sbjct:   22 MTRLLNTPLLVMFGGEDETGSLQNDMFVLHVERRQWHNVTYASGPKPSPRLLHTAVAISSHMLIIIGGETWETGGT---EVSPTIAMNDIWVFDYYDSSWREIGRSDFERLPVLSCLSAVFGRAKGQVPGVYIFGGFGRSERNGSVVYKLRTSDWKLETI----RVVNSKKRK-DTHNSIGRSPNP---EKITWHPRERESHGAIWLPGYGMLVVGGDGGSSILGDCWLFFQDEKDPQTWRWKEIHLKPVGGQTENRLPPLAGHSLVALPTSTVQVLVWGGILNSGQEVMDSEFSYVIDLDRLDRAHTRRVKNVGKTPATGRILHGFARANDLLFAVGGCDADGNVLPGTQYGRLLPKLKASVQAARFFGPKALRTAV-GETDVKTDVNNAVQNTGTEDSAAKKVQAKANKDADGTNGRSRGPFPGKVLEVTDMGLLVSIVIDGKPFKGVLVKNPTNGKREKKEGAEDKMQIDGQKSKPLEAVPRKKPKLDPAAEALPDSPE-IRPKPKPISREEVIQLE 528          
BLAST of Ggra8801.t1 vs. uniprot
Match: B9T305 (Acyl-CoA binding protein, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9T305_RICCO)

HSP 1 Score: 61.6 bits (148), Expect = 1.900e-6
Identity = 36/103 (34.95%), Postives = 47/103 (45.63%), Query Frame = 0
Query:   10 VLVFAGEDESGHLLNDMYALHVERREWKQISYAPGPRPLPRLLHTAVAISSTLLVVIGGDTWESTDSPEAKISPTTALNDIWVFDYSDSSWQQIEDTGSIKLP 112
            ++VF GED S  LLND+YAL +E+  W  +     P P PR  HTA   +   L+V GG             S +   ND+ V D     W Q E  G +  P
Sbjct:  160 LIVFGGEDGSRRLLNDLYALDLEKMTWDVLETTQTP-PAPRFDHTATIHAERYLIVFGG------------CSHSIFFNDLHVLDLQTMEWSQPETRGDLVTP 249          
BLAST of Ggra8801.t1 vs. uniprot
Match: acyl-CoA-binding domain-containing protein 4 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI0007723925 (acyl-CoA-binding domain-containing protein 4 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI0007723925)

HSP 1 Score: 61.6 bits (148), Expect = 1.930e-6
Identity = 36/103 (34.95%), Postives = 47/103 (45.63%), Query Frame = 0
Query:   10 VLVFAGEDESGHLLNDMYALHVERREWKQISYAPGPRPLPRLLHTAVAISSTLLVVIGGDTWESTDSPEAKISPTTALNDIWVFDYSDSSWQQIEDTGSIKLP 112
            ++VF GED S  LLND+YAL +E+  W  +     P P PR  HTA   +   L+V GG             S +   ND+ V D     W Q E  G +  P
Sbjct:  163 LIVFGGEDGSRRLLNDLYALDLEKMTWDVLETTQTP-PAPRFDHTATIHAERYLIVFGG------------CSHSIFFNDLHVLDLQTMEWSQPETRGDLVTP 252          
The following BLAST results are available for this feature:
BLAST of Ggra8801.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IUF96.280e-18155.00Dynein alpha chain, flagellar outer arm n=1 Tax=Gr... [more]
B9T3051.900e-634.95Acyl-CoA binding protein, putative n=1 Tax=Ricinus... [more]
acyl-CoA-binding domain-containing protein 4 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI00077239251.930e-634.95acyl-CoA-binding domain-containing protein 4 n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 9..45
e-value: 1.6E-5
score: 24.8
coord: 49..105
e-value: 4.3E-8
score: 33.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..394
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..500
NoneNo IPR availablePANTHERPTHR46093ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5coord: 10..154
coord: 194..342
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 3..177
e-value: 4.1E-20
score: 74.4
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 178..384
e-value: 2.2E-10
score: 42.1
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 9..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:165061..166563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8801.t1Ggra8801.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 165061..166563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8801.t1 ID=Ggra8801.t1|Name=Ggra8801.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=501bp
MTNLLDTPIVLVFAGEDESGHLLNDMYALHVERREWKQISYAPGPRPLPR
LLHTAVAISSTLLVVIGGDTWESTDSPEAKISPTTALNDIWVFDYSDSSW
QQIEDTGSIKLPFLSCSSAVFGRAKSQVPGVYIFGGYSRDKTYFNVVYRL
RISDWKLEVLPHVEKDANGKKRIIDSNGDDGLKENEQHGERIIPRDRESH
GAIWLPGIGMLVVGGDGGVSILGDCWLFCQHPDDLQSWRWQELRLVPAGN
RPGNKLPRLAGHSLLSLPTNTLKVMVWGGILNTGQDVMASNVSYIIDLDK
ANIAQTVRVTNTGRAPKTGRILHGLIRSRDMLFAFGGCDSDGNIQIGTQH
GRLLPNFKAPNEAASYFGSEATKMAIHGTHSEKSDEDNMKSTEAEGKKGS
STSAARTPLTGKVLEVMDMGLLVSIEIGGKPFKGVLVAHEAQKDSSMIDV
SGEKQKANGQKSKSSDIKPSKRPKLDAAAEALPDSPSKLRPKRAEVIDIE
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller