Ggra879.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra879.t1
Unique NameGgra879.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length614
Homology
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BLAST of Ggra879.t1 vs. uniprot
Match: R7QA82 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA82_CHOCR)

HSP 1 Score: 110 bits (275), Expect = 2.920e-23
Identity = 65/139 (46.76%), Postives = 86/139 (61.87%), Query Frame = 0 
Query:  237 IISGIHACQITEPVRKVAERAQRLISKGSNLCFIEAHFSVPNSVEEAFEIMKKGTNDCSKRQMNHNQP--DLYYKSWSHTQFFAAQMAALGFGFRRCNLRRCLGKPAPP-VEQWLKLE-------RVVMRSASLQEAAA 365
            I + I  C++T PV KVA R+Q LI  G++L F +A F VP++ EEA + M+ GT+D  K  +    P  DLY+ SWSHTQFFAAQMAALG+ F   NL R   K  PP V +WL+LE       R+V   A +Q+ +A
Sbjct:   37 ITANITRCELTSPVLKVASRSQDLIFSGASLFFTKAVFKVPSTEEEALDTMRTGTSDVDK-DLPDGSPINDLYFLSWSHTQFFAAQMAALGYRFLSSNLSRRAQKTKPPAVSEWLRLEKYHTVPRRMVQAGAPVQKISA 174
The following BLAST results are available for this feature:
BLAST of Ggra879.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QA822.920e-2346.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 556..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:42642..44785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra879.t1Ggra879.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 42642..44785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra879.t1 ID=Ggra879.t1|Name=Ggra879.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=614bp
MHSSACAPPALPPDPDDLFTPPPHLRVGQVPAYVWSVLRLTSTNADFAWC
TVCRKWLRYRLDFNASYINALYKHCRSQHHVGHDGKLHPLHALLPPPPPP
SSAAAFHPSAHHRAAVVAAAVAPASAPALHARACAAPAAPAAPAAPAAPA
FRPLSAAPPIADGKSRALAGLHAVLSNRVLSSPSARAPPPLQLPQLPPPQ
LPQLPPPQLPPPLPPQPPPQPPQPPQPPPPPVSAEQIISGIHACQITEPV
RKVAERAQRLISKGSNLCFIEAHFSVPNSVEEAFEIMKKGTNDCSKRQMN
HNQPDLYYKSWSHTQFFAAQMAALGFGFRRCNLRRCLGKPAPPVEQWLKL
ERVVMRSASLQEAAACASASAAATAAAATAAAVERRAAAGGAPGAVAAVA
RAGGVQPGVAGAGRVAHNARTAAAAAVAAQNGPQSRAIAARSGGATTAAV
VHNGGAAAGARVGHNNAAAGAAVGHKGGAAGAAVGHNGGAAGAGAVERRG
GAGGGGVGPNGGAAGAGVGVGRHGGAAGTGVGHNGGAAVRVGRNGGSAAG
GVGGNEAEAAAGGSDGGRGDGAVATTRNADSGSVRRDGTVAGGGDGDGGA
ADAVGAAEVIDLT*
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