Ggra8784.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8784.t1
Unique NameGgra8784.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length486
Homology
BLAST of Ggra8784.t1 vs. uniprot
Match: A0A2V3IW81 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW81_9FLOR)

HSP 1 Score: 725 bits (1871), Expect = 4.650e-260
Identity = 346/485 (71.34%), Postives = 409/485 (84.33%), Query Frame = 0
Query:    1 MVSNLYLEPNGSNETPWGISWAELFTSLRPNQEEITVIKSIISQVEDVLKNAGLSHDLRPGGSFGKKTMTKGDSELHLYSFQQDFQPENYFESHLKPILEALKEEKRFAELKESGYAAVFNTNGIEVRVFAAGTLYGGPKDLLLPPKSSEKQSARIMPDIARGHQLARDVHVETSCSLLRIQTIANQAPLYHDLVRVAKKWRSTGDFMSRADTPGDYLIELLMLEAFTGAPCMPHGPELFGIVIRRFLSLAATQSGTGSDVMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVRRSDLCSIIVVDPAVPFVNVARSVPDWTEMRRCARESLSSFQNTDLLDSLQDKVQALTEGMREVISGMQNQIETLQRLAKSPRRWSGDVQFNEAHMNSETWTTVMEVELHTIPWRVNARKAKTDGTGYMTSVDISLQMMGKKLEQTMDVDVSFRGGTSNLVFDPSVAHVLICRRSEIVRNRDYPMQITVIG 485
            MVSN   E + S ET WG+ W ++F +LRP+ +EI + KSIISQVEDVLK+A L H+L PGGSFGKKT+T G+++L L+S   DFQP+NYFE HLKP++ ALK    F++LKE+G AAVFN +GIEVR+ AAG LYGGPKDLLLP K +EKQS  ++PDI RG Q+AR+VHVET+C +LR Q IANQ PLYHD+VR AKKWRST DF+S AD PGDYLIELLMLEAFTGAPCMP GP L+   +RRFLSLAA Q G+GSDVMADDSMPKSMLWWDRY+NRG ID+CMAKG+LDV RSDLCSIIVVDPAVPFVNVARSVPDW+EMR+CAR+SLSSFQNTDLLDSL  +++AL+EGM + ++GM+NQIE LQ L  SPRRWSG +QFNE HMNS+ WT VMEVEL T+ WR+NARKA+T+GTGY + VDISLQ +GKKLE+T+DVDV FRGGTSNLVFD  V HVLICRRSEIVRNRDY +Q+T++G
Sbjct:    1 MVSNTLQEHSASTETSWGLPWEDVFAALRPSPDEINLYKSIISQVEDVLKDAHLPHNLFPGGSFGKKTLTTGENKLQLFSIYDDFQPDNYFEVHLKPMMAALKSANVFSDLKENGLAAVFNKDGIEVRILAAGVLYGGPKDLLLPLKENEKQSGEVLPDILRGQQIAREVHVETTCGVLRSQVIANQCPLYHDMVRSAKKWRSTCDFISSADMPGDYLIELLMLEAFTGAPCMPRGPGLYSTTMRRFLSLAAAQCGSGSDVMADDSMPKSMLWWDRYYNRGTIDLCMAKGLLDVGRSDLCSIIVVDPAVPFVNVARSVPDWSEMRKCARDSLSSFQNTDLLDSLDHRLRALSEGMLDTVNGMRNQIEALQLLVNSPRRWSGAIQFNEVHMNSDAWTKVMEVELQTVKWRINARKARTEGTGYTSCVDISLQRIGKKLERTIDVDVLFRGGTSNLVFDADVDHVLICRRSEIVRNRDYSIQVTIVG 485          
BLAST of Ggra8784.t1 vs. uniprot
Match: R7QIV2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV2_CHOCR)

HSP 1 Score: 504 bits (1297), Expect = 1.020e-172
Identity = 258/490 (52.65%), Postives = 342/490 (69.80%), Query Frame = 0
Query:   10 NGSNETPWGISWAELFTSLRPNQEEITVIKSIISQVEDVLKNAGLSH-DLRPGGSFGKKTMTKGDSELHLYS-FQQDFQPENYFESHLKPILEALKEEK--RFAELKESGYAAVFNTNGIEVRVFAAGTLYGGPKDLLL-------PPKSSEKQSARIMPDIARGHQLARD---VHVETSCSLLRIQTIANQAPLYHDLVRVAKKWRSTGDFMSRADTPGDYLIELLMLEAFTGAPCMPHGPELFGIVIRRFLSLAATQSGTGSDVMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVRRSDLCSIIVVDPAVPFVNVARSVPDWTEMRRCARESLSSFQNTDLLDSLQDKVQALTEGMREVISGMQNQIETLQRLAKSPRRWSGDVQFNEAHMNSETWTTVMEVELHTIPWRVNARKAKTDGTGYMTSVDISLQMMGKKLEQTMDVDVSFRGGTSNLVFDPSVAHVLICRRSEIVRNRDYPMQITVIG 485
            + S ETPWG SW  LFTSLRP+  ++  + S++  ++D L+   +SH  L  G  FGK T+  GD  L +Y+ F   F   +YFESHL+P+L+AL   K  RFA++ + G A  F+  G+ VR+FAAG L  GPK+LL           ++EK+S+ +  + ARG   A D   +HVETSC+LLR+  IA Q+PLY D+VRVAKKWR+T DFM   + PGDYL+ELLMLEA+ GAP  P  P+ +  + RRFLSL ++QSGTGS+V+ADD+MP+S L W   +N G ++  +A G+L    +D CS++VVDPAVPF NVA +V DW E+R  AR SLS FQN++LL+ LQ K+ +L+EGM EVI GMQ +I  LQ L +SPRRWSG++QF E HMN E WT V EVEL T+ WRVNARK++TDG GY   VDISLQ +GK L +T+DVDV+FR  TSNLVFD +  HVLI  +SE++RNR+YP+QIT++ 
Sbjct:    7 SASVETPWGQSWDSLFTSLRPSPSDLNTLSSLVDTIDDTLRAGNISHVSLHAGSGFGKGTLIAGDMSLDVYAQFGATFSATSYFESHLQPMLDALTSAKGIRFADINDRGLAIHFSFEGVSVRLFAAGALNSGPKELLAMQGGIGRQSSNTEKRSSGVGSN-ARGQFPAMDERGIHVETSCALLRVGFIAMQSPLYKDMVRVAKKWRATSDFMVSENRPGDYLLELLMLEAYLGAPVSPPTPDSYATIFRRFLSLVSSQSGTGSEVVADDAMPRSFLSWPVLYNHGAVEQSIALGLLKTGSADHCSLVVVDPAVPFANVATTVADWGEIRAVARNSLSHFQNSELLEQLQTKLNSLSEGMEEVIIGMQQKIAHLQSLEESPRRWSGNIQFKEVHMNGENWTKVTEVELRTVTWRVNARKSRTDGVGYSKMVDISLQRIGKPLTRTIDVDVNFRSKTSNLVFDANNDHVLIVGKSEVLRNRNYPIQITIVA 495          
The following BLAST results are available for this feature:
BLAST of Ggra8784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IW814.650e-26071.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIV21.020e-17252.65Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.20coord: 159..350
e-value: 8.3E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR11258:SF11SUBFAMILY NOT NAMEDcoord: 58..335
NoneNo IPR availablePROSITEPS5015225A_SYNTH_3coord: 28..105
score: 11.694818
IPR0267742'-5'-oligoadenylate synthasePANTHERPTHR112582-5 OLIGOADENYLATE SYNTHETASEcoord: 58..335
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 23..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:112304..113761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8784.t1Ggra8784.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 112304..113761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8784.t1 ID=Ggra8784.t1|Name=Ggra8784.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=486bp
MVSNLYLEPNGSNETPWGISWAELFTSLRPNQEEITVIKSIISQVEDVLK
NAGLSHDLRPGGSFGKKTMTKGDSELHLYSFQQDFQPENYFESHLKPILE
ALKEEKRFAELKESGYAAVFNTNGIEVRVFAAGTLYGGPKDLLLPPKSSE
KQSARIMPDIARGHQLARDVHVETSCSLLRIQTIANQAPLYHDLVRVAKK
WRSTGDFMSRADTPGDYLIELLMLEAFTGAPCMPHGPELFGIVIRRFLSL
AATQSGTGSDVMADDSMPKSMLWWDRYFNRGVIDMCMAKGMLDVRRSDLC
SIIVVDPAVPFVNVARSVPDWTEMRRCARESLSSFQNTDLLDSLQDKVQA
LTEGMREVISGMQNQIETLQRLAKSPRRWSGDVQFNEAHMNSETWTTVME
VELHTIPWRVNARKAKTDGTGYMTSVDISLQMMGKKLEQTMDVDVSFRGG
TSNLVFDPSVAHVLICRRSEIVRNRDYPMQITVIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0267742-5A_synthase
IPR043519NT_sf