Ggra8782.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8782.t1
Unique NameGgra8782.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length163
Homology
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BLAST of Ggra8782.t1 vs. uniprot
Match: A0A2V3IZ45 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ45_9FLOR)

HSP 1 Score: 87.4 bits (215), Expect = 7.600e-19
Identity = 60/149 (40.27%), Postives = 78/149 (52.35%), Query Frame = 0 
Query:   18 SIEAVTFEVDDKAASSRLMCALTPTVPEPVYLQAA-----TNTGSDSEKQS-DXXXXXXXXXXXXXXXXXXIKLVGDVSDAASDKASPCASFALGVFVGVVPPVLLVRLFARNCVSKCFPAVDGRWFRYGRSLGLLLLVLLCILVAVLR 160
            ++E+V+FEVDD+  +S    +  P  P PVY  +A     T + SD    S                    I+  G  SD    K      FA+GV VGV PP++LVRL A+  V    P +D R+FRYGRS+GL LLV+ CILVAVLR
Sbjct:   12 ALESVSFEVDDRPRTSG---SQPPRKPPPVYKPSADEDVATRSSSDPASASGSAHVSDDAKLREVKTDRIPIQRKGG-SDERGKKREALMCFAMGVLVGVFPPIILVRLCAKQWVDSHLPPLDSRFFRYGRSMGLFLLVIFCILVAVLR 156
The following BLAST results are available for this feature:
BLAST of Ggra8782.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ457.600e-1940.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 162..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..161
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:106618..107106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8782.t1Ggra8782.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 106618..107106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8782.t1 ID=Ggra8782.t1|Name=Ggra8782.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=163bp
MDAESGALRAISLHGGLSIEAVTFEVDDKAASSRLMCALTPTVPEPVYLQ
AATNTGSDSEKQSDDTSEVDAKSDVHAKSDKHIKLVGDVSDAASDKASPC
ASFALGVFVGVVPPVLLVRLFARNCVSKCFPAVDGRWFRYGRSLGLLLLV
LLCILVAVLRIY*
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