Ggra878.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra878.t1
Unique NameGgra878.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length297
Homology
BLAST of Ggra878.t1 vs. uniprot
Match: uncharacterized protein LOC122094692 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C52DFCC (uncharacterized protein LOC122094692 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C52DFCC)

HSP 1 Score: 70.5 bits (171), Expect = 3.880e-10
Identity = 33/71 (46.48%), Postives = 52/71 (73.24%), Query Frame = 0
Query:  165 IQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELELARIQQL 235
            I  E+++++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV+GRF + E   E+ ++  L
Sbjct:  235 ITEETSFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNEDSGEIPKLSGL 305          
BLAST of Ggra878.t1 vs. uniprot
Match: uncharacterized protein LOC122665106 isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC352D6 (uncharacterized protein LOC122665106 isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC352D6)

HSP 1 Score: 69.7 bits (169), Expect = 6.980e-10
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 0
Query:  165 IQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELELARIQQL 235
            I  E+ +++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV+GRF + E   E+ ++  L
Sbjct:  232 IMEETNFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNEDSGEIPKLSGL 302          
BLAST of Ggra878.t1 vs. uniprot
Match: uncharacterized protein LOC122665106 isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC61343 (uncharacterized protein LOC122665106 isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC61343)

HSP 1 Score: 69.7 bits (169), Expect = 7.050e-10
Identity = 33/71 (46.48%), Postives = 51/71 (71.83%), Query Frame = 0
Query:  165 IQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELELARIQQL 235
            I  E+ +++GRY+P ER++R+ RYR KR QRN+++ +KY CRK +AD R RV+GRF + E   E+ ++  L
Sbjct:  232 IMEETNFKVGRYSPEERKLRIHRYRSKRTQRNFNKTIKYACRKTLADSRPRVRGRFARNEDSGEIPKLSGL 302          
BLAST of Ggra878.t1 vs. uniprot
Match: A0A103XJH5 (CCT domain-containing protein n=2 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XJH5_CYNCS)

HSP 1 Score: 68.2 bits (165), Expect = 2.080e-9
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 0
Query:  132 AAGDVTSPQSNTTRTALSAATSEARDGEGSVPDIQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELEL 229
            + GD+ S  S  T   LS   S A   EGS  +   E+++++GRY+  ER+ R+ RYR KR  RN+++++KY CRK +AD R R++GRF + +  +E+
Sbjct:  189 STGDLLSSNSKQTNEGLS---SSALATEGSFME---EASFKVGRYSAEERKERILRYRAKRTHRNFNKKIKYACRKALADNRPRIRGRFARNDEPVEM 280          
BLAST of Ggra878.t1 vs. uniprot
Match: A0A6P5YAZ9 (two-component response regulator-like PRR1 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5YAZ9_DURZI)

HSP 1 Score: 67.8 bits (164), Expect = 2.840e-9
Identity = 30/65 (46.15%), Postives = 48/65 (73.85%), Query Frame = 0
Query:  168 ESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELELARI 232
            E+ +++GRY P ER+ R+ RYR KR QRN+S+ +KY CRK +AD R R++GRF + +  +E+ ++
Sbjct:  224 ETPFKVGRYNPEERQERISRYRAKRNQRNFSKTIKYACRKTLADNRPRIRGRFARNDENVEIPKV 288          
BLAST of Ggra878.t1 vs. uniprot
Match: D8QQ86 (RING-type E3 ubiquitin transferase n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QQ86_SELML)

HSP 1 Score: 68.6 bits (166), Expect = 3.710e-9
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:  168 ESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKRE 224
            + A ++GRY+P ER+VR+ RYRQKR++RNY +++KY CRK +AD R R++GRF K +
Sbjct: 2065 DPAMKVGRYSPEERKVRIDRYRQKRSERNYIKKIKYACRKTLADSRPRIRGRFAKNQ 2121          
BLAST of Ggra878.t1 vs. uniprot
Match: two-component response regulator-like PRR73 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0F74 (two-component response regulator-like PRR73 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0F74)

HSP 1 Score: 67.8 bits (164), Expect = 3.900e-9
Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 0
Query:  166 QMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKRE 224
            Q E  ++IGRY+ AER+ R+ RYRQKR++RN+++++KY CRK +AD R RV+GRF K E
Sbjct:  289 QDECGFKIGRYSLAERKERIHRYRQKRSERNFNKKIKYACRKTLADSRPRVRGRFAKNE 347          
BLAST of Ggra878.t1 vs. uniprot
Match: A0A2K1KMG5 (CCT domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KMG5_PHYPA)

HSP 1 Score: 67.8 bits (164), Expect = 4.680e-9
Identity = 35/81 (43.21%), Postives = 58/81 (71.60%), Query Frame = 0
Query:  160 GSVPDIQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKR-EHELELARIQQLRDNH 239
            G  P  + +S YR+G+Y+  ER++R+ RY+QKR+QRN+++++KY CRK +AD R RV+GRF K  + +L  A + + R+ +
Sbjct:  413 GGSPSFE-DSNYRVGKYSMEERKIRIHRYQQKRSQRNFNKKIKYACRKTLADSRPRVRGRFAKNMDDDLPTALLGRKREEY 492          
BLAST of Ggra878.t1 vs. uniprot
Match: A9SZR6 (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SZR6_PHYPA)

HSP 1 Score: 67.8 bits (164), Expect = 5.390e-9
Identity = 35/81 (43.21%), Postives = 58/81 (71.60%), Query Frame = 0
Query:  160 GSVPDIQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKR-EHELELARIQQLRDNH 239
            G  P  + +S YR+G+Y+  ER++R+ RY+QKR+QRN+++++KY CRK +AD R RV+GRF K  + +L  A + + R+ +
Sbjct:  575 GGSPSFE-DSNYRVGKYSMEERKIRIHRYQQKRSQRNFNKKIKYACRKTLADSRPRVRGRFAKNMDDDLPTALLGRKREEY 654          
BLAST of Ggra878.t1 vs. uniprot
Match: A0A7J6UWL0 (Cct motif-containing protein n=2 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6UWL0_THATH)

HSP 1 Score: 63.5 bits (153), Expect = 6.790e-9
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0
Query:  168 ESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRRVKYDCRKLIADKRRRVQGRFVKREHELELAR 231
            ESAY+IGR +  ER+ R+ RY +KR +RN+S+++KY CRK +AD R RV+GRF K +   E AR
Sbjct:   27 ESAYKIGRLSVEERKERIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGESAR 90          
The following BLAST results are available for this feature:
BLAST of Ggra878.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
uncharacterized protein LOC122094692 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C52DFCC3.880e-1046.48uncharacterized protein LOC122094692 n=1 Tax=Macad... [more]
uncharacterized protein LOC122665106 isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC352D66.980e-1046.48uncharacterized protein LOC122665106 isoform X2 n=... [more]
uncharacterized protein LOC122665106 isoform X1 n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC613437.050e-1046.48uncharacterized protein LOC122665106 isoform X1 n=... [more]
A0A103XJH52.080e-939.80CCT domain-containing protein n=2 Tax=Cynara cardu... [more]
A0A6P5YAZ92.840e-946.15two-component response regulator-like PRR1 n=1 Tax... [more]
D8QQ863.710e-954.39RING-type E3 ubiquitin transferase n=4 Tax=Selagin... [more]
two-component response regulator-like PRR73 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1D0F743.900e-955.93two-component response regulator-like PRR73 n=2 Ta... [more]
A0A2K1KMG54.680e-943.21CCT domain-containing protein n=2 Tax=Physcomitriu... [more]
A9SZR65.390e-943.21Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A7J6UWL06.790e-953.13Cct motif-containing protein n=2 Tax=Thalictrum th... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..126
NoneNo IPR availableCOILSCoilCoilcoord: 222..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..272
IPR010402CCT domainPFAMPF06203CCTcoord: 181..223
e-value: 5.2E-13
score: 48.9
IPR010402CCT domainPROSITEPS51017CCTcoord: 181..223
score: 13.989063
IPR045281Zinc finger protein CONSTANS-likePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 78..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:41501..42391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra878.t1Ggra878.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 41501..42391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra878.t1 ID=Ggra878.t1|Name=Ggra878.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=297bp
MSNAPPPPPPSPPPSPPPPPPPPPLGAAALGGAPLLGDGAPLLGDGARAL
AHGAFAVGAFGATAGVTAAGAALMTPAHAPAHSHGVYVPELTPFALQHVQ
LHMIHMQQQQQQQQQQQQQQQQQQTSQQGGVAAGDVTSPQSNTTRTALSA
ATSEARDGEGSVPDIQMESAYRIGRYTPAERRVRLQRYRQKRAQRNYSRR
VKYDCRKLIADKRRRVQGRFVKREHELELARIQQLRDNHKLDVRHCAPPP
SPPPPPPPPPPPPPPPPPLQLQLHPLAAAQPLPDAVEVHDVLQHFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
IPR045281CONSTANS-like