Ggra8766.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8766.t1
Unique NameGgra8766.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length137
Homology
[Close]
BLAST of Ggra8766.t1 vs. uniprot
Match: A0A2V3IXJ3 (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ3_9FLOR)

HSP 1 Score: 243 bits (621), Expect = 3.960e-81
Identity = 118/137 (86.13%), Postives = 126/137 (91.97%), Query Frame = 0 
Query:    1 MTEVEGKISIWIKSGNFSHASDLYINLFIDDNEIWKTEEKDGFSPDFDSTCVKHIKGDYEKIIIKLMDEDTCDRDDVIGTAEFTIADLLDDGINDD-VSLCDADGNEVGTLGVNINFEPGDVNAFQLFGSMLHKGGD 136
            M EVEGKISIWIKSG+F+H SDLYI + IDDN IWKTEEKDGF+PDFDST VKHIKGDYEKI+++LMDEDTC RDDVI TAEF IADLLDDGINDD VS+CDADGNEVGTLGVNINFE GDVNAFQLFGSMLHKGGD
Sbjct:    1 MAEVEGKISIWIKSGSFNHGSDLYIQVLIDDNSIWKTEEKDGFTPDFDSTVVKHIKGDYEKIVLRLMDEDTCTRDDVIATAEFPIADLLDDGINDDSVSMCDADGNEVGTLGVNINFEAGDVNAFQLFGSMLHKGGD 137
[Close]
BLAST of Ggra8766.t1 vs. uniprot
Match: R7QFN6 (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 181 bits (459), Expect = 1.590e-56
Identity = 88/130 (67.69%), Postives = 104/130 (80.00%), Query Frame = 0 
Query:    4 VEGKISIWIKSGNFSHASDLYINLFIDDNEIWKTEEKDGFSPDFDSTCVKHIKGDYEKIIIKLMDEDTCDRDDVIGTAEFTIADLLDDGINDDVSLCDADGNEVGTLGVNINFEPGDVNAFQLFGSMLHK 133
            +EGK+SIWIK G+FSH+SDLY+ + IDD E+WKT+EKDG SPD+DST VKHIKG+YEKII+KLMDEDT  RDDVIGT EF I D +  GIN    + DA+ N VGT+ VNINFE GDV+ F L GSMLHK
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GINGSFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHK 129
The following BLAST results are available for this feature:
BLAST of Ggra8766.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXJ33.960e-8186.13C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QFN61.590e-5667.69C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 18..91
e-value: 2.0E-8
score: 34.4
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 10..119
e-value: 3.8E-10
score: 42.2
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 6..110
NoneNo IPR availableCDDcd00030C2coord: 12..99
e-value: 1.01814E-7
score: 45.1355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:73081..73842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8766.t1Ggra8766.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 73081..73842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8766.t1 ID=Ggra8766.t1|Name=Ggra8766.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=137bp
MTEVEGKISIWIKSGNFSHASDLYINLFIDDNEIWKTEEKDGFSPDFDST
CVKHIKGDYEKIIIKLMDEDTCDRDDVIGTAEFTIADLLDDGINDDVSLC
DADGNEVGTLGVNINFEPGDVNAFQLFGSMLHKGGD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf