Ggra8760.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8760.t1
Unique NameGgra8760.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A2V3IWF6 (Protein ApaG n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWF6_9FLOR)

HSP 1 Score: 208 bits (529), Expect = 1.000e-62
Identity = 137/250 (54.80%), Postives = 165/250 (66.00%), Query Frame = 0
Query:   40 ARRPSVAREQ---LFKQLQQLQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAXXXXXXXXXXXXXXXXALRLLDPPPPSXXXXXXXXLALPSXXXXXXXXXXXXXXXXXXXSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVI-ATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPG-QTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            A  PS  RE+    F+ L+ LQ+ L+ AV+ ++FA AA LRDRI  +RL+DDYCRTE AL XXXXXXXXXXXXXXXXAL L++PPP                                   S  I VRA  YY+PEQSAP + RFLFGY +RI NRS+HVCQL++R+W I  T G  D+ V GAGVVGRQPVLMPGES++Y+SACPI V P    + VLGS++GH+VFCRGDTG +RF VDV  F F LP
Sbjct:   26 ASSPSSEREKRHATFRTLRGLQKQLNDAVKEQQFAQAATLRDRIRDIRLNDDYCRTELALXXXXXXXXXXXXXXXXXALALMEPPPLLSGMHEEEDAV-----GVRGAREGVLTPHVSVTDSFGIRVRARSYYVPEQSAPQQNRFLFGYDIRIENRSQHVCQLVSRNWTIRTTSGARDTQVSGAGVVGRQPVLMPGESYDYSSACPISVVPDEDMRRVLGSMKGHFVFCRGDTGDVRFNVDVGAFYFHLP 270          
BLAST of Ggra8760.t1 vs. uniprot
Match: R7QG52 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG52_CHOCR)

HSP 1 Score: 201 bits (512), Expect = 1.430e-59
Identity = 122/246 (49.59%), Postives = 159/246 (64.63%), Query Frame = 0
Query:   39 GARRPSVAREQLFKQLQQLQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAXXXXXXXXXXXXXXXXALRLLDPPPPSXXXXXXXXLALPSXXXXXXXXXXXXXXXXXXXSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            GAR   VA   L+++++ L+++L  AV  ERFADAARLRD+I +L L+DDY RTE  + XXXXXXXXXXXXXXXX L++L+PPP           +                       +  I V  E YY+PEQS P + RFLFGY+V ITN     CQL++RHW I + G ++S VKG GVVGRQPVL PGESFEY SACP+ V  + GQ+V+G+++G Y FC+GDTG ++F VD+  F  +LP
Sbjct:   61 GAREARVA---LWREVEALKKSLTVAVNAERFADAARLRDQIESLSLADDYVRTEKEMXXXXXXXXXXXXXXXXXVLKVLEPPPGIAMLRGETVASTACEDTSMADLKPEDVESWSKTKTAGIVVHVESYYMPEQSLPEQSRFLFGYKVTITNEGNETCQLVSRHWTINSSGGSESEVKGPGVVGRQPVLEPGESFEYNSACPVTVSLKGGQSVVGNMKGKYHFCKGDTGDVKFSVDIATFYLKLP 303          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A5J4Z6D3 (Protein ApaG n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6D3_PORPP)

HSP 1 Score: 129 bits (324), Expect = 2.820e-31
Identity = 99/247 (40.08%), Postives = 139/247 (56.28%), Query Frame = 0
Query:   47 REQLFKQLQQLQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAXXXXXXXXXXXXXXXXALRLLDPPPPSXXXXXXXXLALPSXXXXXXXXXXXXXXXXXXXSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRS--EHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTV-----LGSLRGHYVFCRGDTGHIRFRVDVLPFCFELPAA 286
            R +L++Q++ L+ +L++A+R E+F +AA LRD+I  L+ SD Y + E    XXXXXXXXXXXXXXXX  + L PPP           A                      +S  + V  + YY+PE+S P+   F+FGY ++I+N    + + QL+ RHW I T    +S VKG GVVG+QPVL  GESFEY S CPI ++    +++     LG + G Y F  G  G+  F V V P+ F LP+A
Sbjct:  130 RLRLWEQVELLEFSLEAAIRTEQFQEAASLRDKIRVLKESDPYVQVERRXXXXXXXXXXXXXXXXXXXXQKLSPPPDPKKERLANEKA----------SRLKSAPQTASRASEGVLVEVKSYYIPEKSKPSNSYFVFGYHIKISNTGSPKGMVQLVRRHWKICTREGDESEVKGPGVVGQQPVLDKGESFEYDSICPIHLKTTDAKSIAAGQQLGCMEGTYSFVGGPLGNEWFDVAVPPYGFFLPSA 366          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A7S1XDM1 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDM1_9RHOD)

HSP 1 Score: 125 bits (314), Expect = 5.670e-31
Identity = 97/242 (40.08%), Postives = 129/242 (53.31%), Query Frame = 0
Query:   57 LQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAXXXXXXXXXXXXXXXXALRLLDPPPPSXXXXXXXX-------------LALPSXXXXXXXXXXXXXXXXXXXSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPG-QTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            ++++L  AV+ ERF DAAR+RD I  LR+ D Y R    L  XXXXXXXXXXXXXXX ++ + PPPP                      +   S                    +N I V A  +++P +S+  ++ +LFGYR++I N S    QL++RHW     G  D  V+G GVVG+QPVL  GE+FEYTSA P+R  P  G Q VLG + G Y F  G TG+    ++V  F F LP
Sbjct:    1 MEKSLKVAVKAERFGDAARIRDAIEELRMRDPYIRLRQELDEXXXXXXXXXXXXXXXXMKWIPPPPPLPKDVVKVATTPGVQGPREGTDVLAESAALELAALTKDSAPNESNTVTNGIRVIARSFFIPAKSSAKDRYYLFGYRIQIINESAETVQLVSRHWRTRA-GGVDGEVRGTGVVGKQPVLAEGETFEYTSATPLRDIPTLGSQRVLGHMTGTYRFAAGATGNRWLDIEVGRFYFVLP 241          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A1X6NI77 (ApaG domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NI77_PORUM)

HSP 1 Score: 119 bits (297), Expect = 4.730e-30
Identity = 54/109 (49.54%), Postives = 71/109 (65.14%), Query Frame = 0
Query:  181 FLFGYRVRITNRSEHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELPAAHRL 289
            ++FGY+VR+TN S    Q++ RHWVI   G   + V+G G+VG QPVLMPGE+FEYTS CP+R+R  P  +VL S+ G Y    GDTG    +VDV  F   LP  +R+
Sbjct:    2 YVFGYKVRLTNTSAVAVQVVGRHWVIEAVGGVVNEVRGVGIVGEQPVLMPGETFEYTSLCPLRIRLTPSLSVLASMHGDYTLVSGDTGGKSIKVDVPKFHLILPPVYRM 110          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A7S0MN03 (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MN03_9CRYP)

HSP 1 Score: 124 bits (310), Expect = 1.440e-29
Identity = 77/241 (31.95%), Postives = 115/241 (47.72%), Query Frame = 0
Query:   50 LFKQLQQLQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAXXXXXXXXXXXXXXXXALRLLDPPPPSXXXXXXXXLALPSXXXXXXXXXXXXXXXXXXXSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDG-NADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPR-----PGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            L+ ++++++  L  A+  E ++ AA +RDRI +L+L D Y   +  +                  +  +  PP           ++P                    ++  + V+A  +Y+PEQS+P++ RF+FGY + I N     CQL++R+W I T        V G+GVVGRQPVL PGE+F YTSACP+ V        P    LGS+ G Y+   G  G   F V V PF F LP
Sbjct:   93 LWAEVEEMETKLQEAIDSEEYSQAATIRDRIKSLKLRDPYAAAKDYMERSIAEEKYEEAARWRNKMNEVGEPPQKPGKGSS---SVPYVGEGASPTGGSDGVSSSDITTLGVRVQATSFYIPEQSSPSDGRFIFGYNITIFNGGSKTCQLVSRNWQIRTAPLGLTEEVSGSGVVGRQPVLEPGEAFMYTSACPLAVDAEYLARLPPHRSLGSMEGSYLMVAGPLGQEVFAVRVAPFGFVLP 330          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A7Z0N0A2 (Protein ApaG n=5 Tax=Alcaligenaceae TaxID=506 RepID=A0A7Z0N0A2_9BURK)

HSP 1 Score: 117 bits (294), Expect = 1.770e-29
Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 0
Query:  161 ICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            I V     YLPEQS P EQ+F+F Y VRITN+ EH  Q+++RHW+I         V+G GVVG+QP+L PGE+FEYTS CP+   P P    +G++RG Y  C G+ G I F V +L F   +P
Sbjct:    6 IAVTVTPQYLPEQSEPDEQQFVFAYTVRITNKGEHAAQVISRHWIITDGQQHTQEVRGLGVVGQQPLLNPGETFEYTSGCPL---PTP----VGTMRGTY-HCVGENG-IPFEVPILEFVLAMP 120          
BLAST of Ggra8760.t1 vs. uniprot
Match: F4GUA1 (Protein ApaG n=2 Tax=Pusillimonas (ex Stolz et al. 2005) TaxID=305976 RepID=F4GUA1_PUSST)

HSP 1 Score: 115 bits (287), Expect = 1.930e-28
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 0
Query:  161 ICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNAD-SHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            I V     YLP+QS P EQ+F+F Y VRITN  +H  Q+++RHW+I TDGN     V+G GVVG+QP+L PGE+FEYTS CP+   P P    +GS+RG Y+ C G+ G + F V +  F   +P
Sbjct:    6 IAVTVAPQYLPDQSEPQEQQFVFAYTVRITNNGQHAAQVISRHWII-TDGNQHVQEVRGLGVVGQQPLLKPGETFEYTSGCPL---PTP----VGSMRGSYL-CVGENG-VPFDVAIHEFVLAMP 120          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A1M5T8A9 (Protein ApaG n=5 Tax=Alcaligenaceae TaxID=506 RepID=A0A1M5T8A9_9BURK)

HSP 1 Score: 114 bits (286), Expect = 2.720e-28
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0
Query:  161 ICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            I V     YLPEQS P EQ+F+F Y VRITN+ EH  Q+++RHW+I         V+G GVVG+QP+L PGE+FEYTS CP+   P P    +G++RG Y  C G+ G + F V +  F   +P
Sbjct:    6 IAVTVTPQYLPEQSEPNEQQFVFAYTVRITNKGEHAAQVISRHWIITDGQQHTQEVRGLGVVGQQPLLGPGETFEYTSGCPL---PTP----VGTMRGTY-HCVGENG-VPFEVPIQEFVLAMP 120          
BLAST of Ggra8760.t1 vs. uniprot
Match: A0A8J5DUU2 (Uncharacterized protein n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5DUU2_9DIPT)

HSP 1 Score: 114 bits (286), Expect = 4.450e-28
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 0
Query:  168 YYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLLARHWVIATDGNADSH-VKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQTVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELP 284
            Y++PEQS PA+Q+++F Y VRITN  EH  Q+++RHW+I TDGN +   V+G GVVG+QP+L PGE+FEYTS CP+        T +G++RG Y  C G+ G I F V +  F   +P
Sbjct:   30 YFVPEQSDPAQQQYVFAYTVRITNTGEHPAQVISRHWII-TDGNQNEQDVRGLGVVGQQPLLAPGETFEYTSGCPL-------PTSVGTMRGTY-HCVGENG-IPFEVSIPEFLLAMP 137          
The following BLAST results are available for this feature:
BLAST of Ggra8760.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWF61.000e-6254.80Protein ApaG n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QG521.430e-5949.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z6D32.820e-3140.08Protein ApaG n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A7S1XDM15.670e-3140.08Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NI774.730e-3049.54ApaG domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S0MN031.440e-2931.95Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7Z0N0A21.770e-2948.39Protein ApaG n=5 Tax=Alcaligenaceae TaxID=506 RepI... [more]
F4GUA11.930e-2848.80Protein ApaG n=2 Tax=Pusillimonas (ex Stolz et al.... [more]
A0A1M5T8A92.720e-2846.77Protein ApaG n=5 Tax=Alcaligenaceae TaxID=506 RepI... [more]
A0A8J5DUU24.450e-2849.15Uncharacterized protein n=1 Tax=Bradysia odoriphag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..137
NoneNo IPR availablePANTHERPTHR47191OS05G0170800 PROTEINcoord: 37..282
IPR007474ApaG domainPFAMPF04379DUF525coord: 171..262
e-value: 1.2E-27
score: 96.0
IPR007474ApaG domainPROSITEPS51087APAGcoord: 155..288
score: 32.084175
IPR001943UVR domainPFAMPF02151UVRcoord: 52..84
e-value: 4.2E-6
score: 26.3
IPR001943UVR domainPROSITEPS50151UVRcoord: 51..86
score: 9.493513
IPR036767ApaG domain superfamilyGENE3D2.60.40.1470ApaG domaincoord: 153..291
e-value: 1.4E-35
score: 124.0
IPR036767ApaG domain superfamilySUPERFAMILY110069ApaG-likecoord: 158..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:61535..62416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8760.t1Ggra8760.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 61535..62416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8760.t1 ID=Ggra8760.t1|Name=Ggra8760.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MAFVSPMVARRARATRRRGATCCAAPPPPPTPPAAGDDGARRPSVAREQL
FKQLQQLQRTLDSAVRRERFADAARLRDRIHALRLSDDYCRTESALAAAV
REQRFADAARLRDALRLLDPPPPSPPPPPPPPLALPSASLPSVSLSSVSL
SSVSLSSSNRICVRAEGYYLPEQSAPAEQRFLFGYRVRITNRSEHVCQLL
ARHWVIATDGNADSHVKGAGVVGRQPVLMPGESFEYTSACPIRVRPRPGQ
TVLGSLRGHYVFCRGDTGHIRFRVDVLPFCFELPAAHRLQQPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007474ApaG_domain
IPR001943UVR_dom
IPR036767ApaG_sf