Ggra876.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra876.t1
Unique NameGgra876.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length251
Homology
BLAST of Ggra876.t1 vs. uniprot
Match: A0A2V3IWZ5 (NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWZ5_9FLOR)

HSP 1 Score: 408 bits (1048), Expect = 1.800e-142
Identity = 192/224 (85.71%), Postives = 206/224 (91.96%), Query Frame = 0
Query:   21 ARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDLEALKTAQ 244
            ARPFAAGLNVHR+A HNTHDTPF+FT+ NYQRIR ILKRFP+NYAASAVIPLLDLAQRQNGGWLPL+AMNKVA VL+MPPIRVYEVASFYTMFNRE+IGKYNVQVCTTTPCMLRGGYDILDACK HL I VGADT DGLFHLMEVECLGACVNAPMVQINDHFYEDLTP++VK VL+ L+ GK P IGPQIDRNGCEGP+GRT+LTS  P P CRDL+ALK AQ
Sbjct:   27 ARPFAAGLNVHRDAAHNTHDTPFDFTEHNYQRIRAILKRFPKNYAASAVIPLLDLAQRQNGGWLPLSAMNKVATVLSMPPIRVYEVASFYTMFNRERIGKYNVQVCTTTPCMLRGGYDILDACKSHLGIGVGADTDDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPNSVKAVLTDLKNGKHPTIGPQIDRNGCEGPKGRTTLTSPPPAPYCRDLDALKPAQ 250          
BLAST of Ggra876.t1 vs. uniprot
Match: R7QLY4 (NUOE homolog, NADH dehydrogenase (Ubiquinone) subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLY4_CHOCR)

HSP 1 Score: 369 bits (947), Expect = 1.040e-126
Identity = 174/221 (78.73%), Postives = 194/221 (87.78%), Query Frame = 0
Query:   24 FAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDLEALKTAQ 244
            +A GLNVHR++  NT DTPF+F+D+NY +I+TILKR+P+NYAASAVIPLLDLAQRQNGGWLPL+AMNKVA +L M PIRVYEVASFYTMFNR+KIGKYNVQVCTTTPCMLRG YDILDA K+HL ++VG DT DGLFH+ME ECLGACVNAPMVQINDHFYEDLT  TVK VLS L+AG+QP IGPQIDRNGCEGPQGRTSL +   GP CRDL A K AQ
Sbjct:   53 YAGGLNVHRDSADNTVDTPFDFSDENYAQIQTILKRYPKNYAASAVIPLLDLAQRQNGGWLPLSAMNKVAKLLGMAPIRVYEVASFYTMFNRDKIGKYNVQVCTTTPCMLRGAYDILDAVKEHLGVEVGGDTADGLFHVMEAECLGACVNAPMVQINDHFYEDLTKKTVKSVLSDLKAGRQPKIGPQIDRNGCEGPQGRTSLKTPAGGPFCRDLAAAKEAQ 273          
BLAST of Ggra876.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: NADH-quinone oxidoreductase subunit E-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8692 (LOW QUALITY PROTEIN: NADH-quinone oxidoreductase subunit E-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8692)

HSP 1 Score: 346 bits (887), Expect = 8.000e-118
Identity = 167/226 (73.89%), Postives = 186/226 (82.30%), Query Frame = 0
Query:   12 AVGASSRVPARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDL 237
            A G  +  P R  AAGLNVHR+A +N  DTPFEF+++NY +I  I KR+P+NYAASAVIPLLDLAQRQ GGWLPLAAMNKVA VL+MPPIRVYEVASFYTMFNREKIG+YN+QVCTTTPCMLRGGYDILDA K  + +DVG DT DGLFHLMEVECLGACVNAPMVQIND FYEDLTP ++  VL  L+  K+ +IGPQ  RNGCEGP GRTSL    PGP CRDL
Sbjct:   26 AAGTDAATP-RTLAAGLNVHRDAAYNREDTPFEFSEENYAKIAVIRKRYPKNYAASAVIPLLDLAQRQAGGWLPLAAMNKVARVLDMPPIRVYEVASFYTMFNREKIGRYNIQVCTTTPCMLRGGYDILDAIKAKIGVDVGGDTDDGLFHLMEVECLGACVNAPMVQINDDFYEDLTPASISVVLDNLRTXKKHSIGPQNGRNGCEGPMGRTSLKMPPPGPFCRDL 250          
BLAST of Ggra876.t1 vs. uniprot
Match: A0A7S1XCL2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCL2_9RHOD)

HSP 1 Score: 335 bits (859), Expect = 1.670e-113
Identity = 158/214 (73.83%), Postives = 179/214 (83.64%), Query Frame = 0
Query:   24 FAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDL 237
            FA GLNVHRE P+NT + PF+FT +NY+ I  ILK++P NY ASAVIPLLDLAQRQ GGWLPLAAMNKVA VL MPP+RVYEVA+F+TMFNREKIGKYNVQ+CTTTPCMLRGGY ILDA KKHL I+VG DT DGLFHLMEVECLGACVNAPM+QINDH+YEDLTP+T   VL +L+ G++P IGPQ  R GC G QG+TSL     GP CR+L
Sbjct:   50 FAGGLNVHREDPNNTAEAPFDFTSENYEEIGRILKKYPANYKASAVIPLLDLAQRQCGGWLPLAAMNKVARVLGMPPMRVYEVATFFTMFNREKIGKYNVQICTTTPCMLRGGYGILDAIKKHLGIEVGGDTSDGLFHLMEVECLGACVNAPMMQINDHYYEDLTPETAVAVLESLRRGEKPQIGPQNGRIGCLGIQGKTSLQEAPSGPYCREL 263          
BLAST of Ggra876.t1 vs. uniprot
Match: A0A5J4YIZ6 (NADH dehydrogenase ubiquinone flavoprotein 2, mitochondrial n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIZ6_PORPP)

HSP 1 Score: 319 bits (818), Expect = 1.400e-106
Identity = 148/220 (67.27%), Postives = 177/220 (80.45%), Query Frame = 0
Query:   20 PARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDLEA 239
            PA  +A  +N HR+ PHNT +TPF+FTD+NY +I  +LK++P NY +SAVIP LDLAQRQ GGWLPLAAMNKVA VL M P+RVYEVA+FYTM+NREKIGKYN+QVCTTTPCM+RGGY++L AC+++L I VG DTPDGLFHLMEVECLGACVNAPMVQIND FYEDLTP++   VL + Q GK    GPQ  R+ C GPQG+T+L  E  GP   +L+A
Sbjct:   93 PAWRYAEAMNQHRDVPHNTEETPFDFTDENYTKIAELLKKYPSNYKSSAVIPALDLAQRQCGGWLPLAAMNKVANVLEMAPMRVYEVATFYTMYNREKIGKYNIQVCTTTPCMIRGGYEVLKACEEYLGIKVGGDTPDGLFHLMEVECLGACVNAPMVQINDDFYEDLTPESTVKVLKSFQEGKPLPYGPQNGRHTCVGPQGKTTLFEEPSGPSAPNLDA 312          
BLAST of Ggra876.t1 vs. uniprot
Match: M1V6R9 (NADH dehydrogenase I flavoprotein 24kDa subunit n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6R9_CYAM1)

HSP 1 Score: 287 bits (734), Expect = 9.600e-95
Identity = 136/218 (62.39%), Postives = 162/218 (74.31%), Query Frame = 0
Query:   20 PARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDL 237
            P R  A   NVHR++  N+  T F+F++ NY++I  ILKR+P NY  SAVIP+LDLAQR+ GGWLPLAAMNKVA VL M P+RVYE+A+FYTMFN   IGKYNVQVCTTTPCMLRG YDIL AC++      G D+PDGLFH+MEVECLGAC NAPM+QIND +YEDLTP + K VL + + G     GPQ+ R    G QG+T+L  E PGP CRDL
Sbjct:   32 PRRALAGRSNVHRDSEGNSEFTTFDFSEDNYKKIAEILKRYPVNYKQSAVIPVLDLAQRECGGWLPLAAMNKVAQVLGMQPMRVYEIATFYTMFNTVPIGKYNVQVCTTTPCMLRGAYDILRACEEESGARAGGDSPDGLFHIMEVECLGACANAPMMQINDDYYEDLTPQSAKAVLKSFRDGNPLKPGPQVARKSSMGIQGKTTLLEEPPGPSCRDL 249          
BLAST of Ggra876.t1 vs. uniprot
Match: M2XLY6 (NADH dehydrogenase (Ubiquinone) flavoprotein 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XLY6_GALSU)

HSP 1 Score: 275 bits (704), Expect = 8.440e-90
Identity = 129/219 (58.90%), Postives = 164/219 (74.89%), Query Frame = 0
Query:   20 PARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDLE 238
            P++ F+ G   H +   NT +T F+FTD+NY++I  ILK++PRNY +SAVI LLDL QRQ GGW+PLAAMN+VA +L MPPIRVYEV +FY+MF RE IGK+NVQVC TTPCM+RG YDIL A +    ++ G ++PD +FHL EVECLGACVNAPM+Q+ND +YEDLT ++   VL  L+  K   +GPQ  R+ C G QG+T+L SE PGP CR LE
Sbjct:   50 PSKSFSTGSLSHVDREGNTAETTFDFTDENYEKIENILKKYPRNYKSSAVIALLDLVQRQCGGWIPLAAMNQVAKILEMPPIRVYEVVTFYSMFYREPIGKFNVQVCCTTPCMIRGAYDILRAIQSKFNLEPGGNSPDMMFHLEEVECLGACVNAPMMQVNDDYYEDLTVESAIQVLENLRDHKAVKVGPQNSRHQCVGIQGKTTLLSEPPGPYCRSLE 268          
BLAST of Ggra876.t1 vs. uniprot
Match: L8HJK4 (NADH:ubiquinone oxidoreductase 24 kDa subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJK4_ACACA)

HSP 1 Score: 270 bits (689), Expect = 1.300e-87
Identity = 133/226 (58.85%), Postives = 164/226 (72.57%), Query Frame = 0
Query:   17 SRVPARPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRG--GYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQID-RNGCEGPQGRTSLTSELPGPQCR-DLE 238
            S VP +    GL+ HR+ P NT DTPF+FT+ N   I+ IL ++P NY  +A IPLL LAQ Q GGW+PLAAMNK+A +L +PP++VYEVA+FYTMFNR K+GKY+VQ+CTTTPC L G     IL+  KKHL I VG  T DGLF L EVECLGACVNAPM+QI D ++EDLTP++   +L  L+AGK P +GPQ   R  CEGPQG+T+L +   GP CR DLE
Sbjct:   42 SSVPRQGDHGGLSQHRDTPDNTIDTPFDFTEANTVEIKKILAKYPVNYKQAATIPLLHLAQYQTGGWVPLAAMNKIAKILEIPPMKVYEVATFYTMFNRTKVGKYHVQLCTTTPCQLGGCGSTVILETIKKHLNIGVGETTADGLFTLTEVECLGACVNAPMLQIGDDYFEDLTPESTVALLETLKAGKTPKVGPQTGGRKNCEGPQGKTTLFAAPAGPYCRPDLE 267          
BLAST of Ggra876.t1 vs. uniprot
Match: D3BVI2 (NADH dehydrogenase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BVI2_POLPP)

HSP 1 Score: 271 bits (692), Expect = 4.610e-87
Identity = 128/213 (60.09%), Postives = 156/213 (73.24%), Query Frame = 0
Query:   24 FAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRD 236
            F+  L+ H E   N   TPF+F ++N  ++  IL ++P  Y  SA+IPLLDLAQRQNGGW+ L AM+KVA ++ +PP+  YEVASFYTMFNR KIGK  VQVCTTTPCMLRG   ILDACK HL+I VG  T D +F L EVECLGACVNAPM+ IND FYEDLTPD++K +L+ +Q GK+  IGPQ  R   EGPQG+T+L  +  GP CRD
Sbjct:   30 FSDALSRHIETEENNDHTPFDFNEENMVKVEKILSKYPPAYRQSAMIPLLDLAQRQNGGWISLRAMDKVAEIIGVPPMEAYEVASFYTMFNRTKIGKNFVQVCTTTPCMLRGSTAILDACKHHLKIGVGETTKDDVFTLAEVECLGACVNAPMICINDDFYEDLTPDSMKNLLNQIQNGKETKIGPQTHRKAAEGPQGKTTLLEQPSGPFCRD 242          
BLAST of Ggra876.t1 vs. uniprot
Match: A0A2P6N4U5 (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N4U5_9EUKA)

HSP 1 Score: 266 bits (681), Expect = 1.180e-86
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 0
Query:   22 RPFAAGLNVHREAPHNTHDTPFEFTDQNYQRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPPIRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRIDVGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQAGKQPAIGPQIDRNGCEGPQGR-TSLTSELPGPQCRD 236
            RP +  L+ H++ P N   TPF+FT +NY+  + I+ ++P  Y  +A+IP+LDLAQRQ+GGWLPLAAM+KVA +L +PPIRVYEVASFYTMFNR  IGK++VQ+CTTTPCMLRG Y+ILD CKK+L IDVG  TPDG+F L EVEC GACVNAPM  + D ++EDLT +T   +L A + G++P  GPQ        P+G+ TSL  E  GP  RD
Sbjct:   35 RPLSDTLSTHKDQPENNASTPFDFTPENYEECKKIIAKYPSGYKRAAMIPMLDLAQRQHGGWLPLAAMDKVAKILEVPPIRVYEVASFYTMFNRNPIGKHHVQICTTTPCMLRGAYEILDVCKKNLGIDVGQTTPDGMFTLGEVECAGACVNAPMFSVGDDYFEDLTEETTNQILDAFKRGERPKPGPQHKERYSSEPRGKQTSLIGEPVGPFARD 250          
The following BLAST results are available for this feature:
BLAST of Ggra876.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWZ51.800e-14285.71NADH dehydrogenase [ubiquinone] flavoprotein 2, mi... [more]
R7QLY41.040e-12678.73NUOE homolog, NADH dehydrogenase (Ubiquinone) subu... [more]
LOW QUALITY PROTEIN: NADH-quinone oxidoreductase subunit E-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D86928.000e-11873.89LOW QUALITY PROTEIN: NADH-quinone oxidoreductase s... [more]
A0A7S1XCL21.670e-11373.83Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YIZ61.400e-10667.27NADH dehydrogenase ubiquinone flavoprotein 2, mito... [more]
M1V6R99.600e-9562.39NADH dehydrogenase I flavoprotein 24kDa subunit n=... [more]
M2XLY68.440e-9058.90NADH dehydrogenase (Ubiquinone) flavoprotein 2 n=1... [more]
L8HJK41.300e-8758.85NADH:ubiquinone oxidoreductase 24 kDa subunit n=1 ... [more]
D3BVI24.610e-8760.09NADH dehydrogenase n=1 Tax=Polysphondylium pallidu... [more]
A0A2P6N4U51.180e-8657.41Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002023NADH-quinone oxidoreductase subunit E-likeTIGRFAMTIGR01958TIGR01958coord: 53..199
e-value: 1.7E-52
score: 175.5
IPR002023NADH-quinone oxidoreductase subunit E-likePIRSFPIRSF000216NDH-1_Ecoord: 28..250
e-value: 1.6E-76
score: 254.9
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 118..215
e-value: 1.5E-30
score: 107.3
NoneNo IPR availablePFAMPF012572Fe-2S_thioredxcoord: 54..199
e-value: 2.1E-57
score: 193.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..250
NoneNo IPR availablePANTHERPTHR10371NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIALcoord: 22..238
IPR041921NADH-quinone oxidoreductase subunit E, N-terminalGENE3D1.10.10.1590coord: 43..116
e-value: 4.4E-24
score: 86.4
IPR042128NuoE domainCDDcd03064TRX_Fd_NuoEcoord: 120..199
e-value: 4.86182E-38
score: 126.094
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 45..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:39154..39906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra876.t1Ggra876.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 39154..39906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra876.t1 ID=Ggra876.t1|Name=Ggra876.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=251bp
MSLVARVAKSLAVGASSRVPARPFAAGLNVHREAPHNTHDTPFEFTDQNY
QRIRTILKRFPRNYAASAVIPLLDLAQRQNGGWLPLAAMNKVAAVLNMPP
IRVYEVASFYTMFNREKIGKYNVQVCTTTPCMLRGGYDILDACKKHLRID
VGADTPDGLFHLMEVECLGACVNAPMVQINDHFYEDLTPDTVKGVLSALQ
AGKQPAIGPQIDRNGCEGPQGRTSLTSELPGPQCRDLEALKTAQPQPSTN
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002023NuoE-like
IPR041921NuoE_N
IPR042128NuoE_dom
IPR036249Thioredoxin-like_sf