Ggra875.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra875.t1
Unique NameGgra875.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length220
Homology
BLAST of Ggra875.t1 vs. uniprot
Match: A0A2V3IYB9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB9_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 2.540e-79
Identity = 137/227 (60.35%), Postives = 171/227 (75.33%), Query Frame = 0
Query:    1 MNSFSGVKRARSD-GEVVSVYAGSAFSYAPPL----RVHKRARRLSEARAP--ELLALLRSDRDAVRRFGARAAFLASLPGGESLLLGMLPLLGSDGTSLLSIIDLNSFQNNIMSLINDYSARGVSMTTLNVRGHSFCRADKDLVLTSFSSAYGHHGVVCALVHYVANSLFRAQRTMSINILSGGGVRDVLIAEWCNMYKLKTRVTPPQLILLHCES-RVFLLPIVV 219
            MN+  GVKR+R+D GEV+S+ A + F++        RV KRARRL E RAP  +L ALLRSD  A RR+ AR AFL +L   E +LLGM  LL SD  +LLSI+DLN+ Q++IM+++ND +AR VSMT LNVRGH+FC ADK  VLTSF+SAYGHH V C LVHYVA+ +F     M+I++LSGGGVRDVLIA+WC  +KLKTRVTPP LI+L CES R+FL+P+VV
Sbjct:    1 MNALRGVKRSRADAGEVISLVAPAQFAHPHAATHHHRVFKRARRLQELRAPTSQLSALLRSDPHASRRYQARVAFLRTLAAPEPVLLGMCHLLQSDAAALLSIVDLNTHQSSIMAVLNDCAARAVSMTALNVRGHAFCMADKRPVLTSFTSAYGHHRVACELVHYVAHRVFAGYSRMAISVLSGGGVRDVLIADWCAQHKLKTRVTPPHLIILRCESQRLFLIPVVV 227          
BLAST of Ggra875.t1 vs. uniprot
Match: R7QKA2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKA2_CHOCR)

HSP 1 Score: 150 bits (379), Expect = 5.890e-42
Identity = 82/186 (44.09%), Postives = 119/186 (63.98%), Query Frame = 0
Query:   35 KRARRLSEARAPELLA-LLRSDRDAVRRFGARAAFLASLPGGESLLLGMLPLLGSDGTSLLSIIDLNSFQNNIMSLINDYSARGVSMTTLNVRGHSFCRADKDLVLTSFSSAYGHHGVVCALVHYVANSLFRAQRTMSINILSGGGVRDVLIAEWCNMYKLKTRVTPPQLILLHCES-RVFLLPIV 218
            KR RR      P  +A +LRSD     ++  R +FL SL   ES +LG+L  L ++  + L+I+DLN +++N++ +I+D+S RGVS++TLNV+ H+F   +K  VL SF S YGH    C +  Y+A ++F  +  +SIN++SGGGVRDVLIA+WC  Y      TPPQ+ILL   S  VFL+P +
Sbjct:   32 KRVRRT--VTTPNTIATILRSDNPVPSKYALRLSFLQSLHIPESAVLGLLQGLSNEAAAFLAIVDLNLYRDNLLQIISDFSNRGVSISTLNVKAHAFIMNEKQGVLNSFKSFYGHQAWPCRVAEYIAGTVFGEETAISINVMSGGGVRDVLIADWCTFYYKTPTPTPPQIILLTAPSGAVFLIPFI 215          
The following BLAST results are available for this feature:
BLAST of Ggra875.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYB92.540e-7960.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKA25.890e-4244.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:37751..38410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra875.t1Ggra875.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 37751..38410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra875.t1 ID=Ggra875.t1|Name=Ggra875.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=220bp
MNSFSGVKRARSDGEVVSVYAGSAFSYAPPLRVHKRARRLSEARAPELLA
LLRSDRDAVRRFGARAAFLASLPGGESLLLGMLPLLGSDGTSLLSIIDLN
SFQNNIMSLINDYSARGVSMTTLNVRGHSFCRADKDLVLTSFSSAYGHHG
VVCALVHYVANSLFRAQRTMSINILSGGGVRDVLIAEWCNMYKLKTRVTP
PQLILLHCESRVFLLPIVV*
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