Ggra8747.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8747.t1
Unique NameGgra8747.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
BLAST of Ggra8747.t1 vs. uniprot
Match: A0A2V3IFJ2 (Transcription-associated protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFJ2_9FLOR)

HSP 1 Score: 304 bits (778), Expect = 2.710e-91
Identity = 162/223 (72.65%), Postives = 190/223 (85.20%), Query Frame = 0
Query:    1 MDHLSARQRAQLFSLKGKLLAQLGREDESVEAISTALFTSADVGSAWLSWGEHCDDMQKKAAEDPSAFASFADNIDSDDKQIEELMGVSNGYAAELAFSESAVKCYLKAVRFGSRRARAFLSRVLRLLSLDVQSRLSFEFTTSRLIEHQSSLTPSASKTGQLNTGAKAEQGTQKTAAPISATGQDNGNADKQKGVSSQAEPNKTGLLSSERKGVSRALKCGNL 223
            MDHL+ RQRAQLF+LKGKLLAQLGREDESVEAISTAL+ SADVGSAWLSWG+HCD+MQKKAAEDPSAF++FA+ +D+D+KQIEEL+GVS+GYAAELAF ESAVKCYL+AVRFGSRRARAFL RVLRLLSLDVQSR+SF+FTT  LIEHQ+SLTPSA+KT   ++ A A++  +K+     ++ Q  GN +K KGV SQ+E  KT  LSSERKGVSRAL    L
Sbjct: 3396 MDHLNTRQRAQLFALKGKLLAQLGREDESVEAISTALYNSADVGSAWLSWGQHCDNMQKKAAEDPSAFSNFAEGVDADEKQIEELIGVSSGYAAELAFRESAVKCYLQAVRFGSRRARAFLPRVLRLLSLDVQSRVSFDFTTRSLIEHQNSLTPSAAKTDPGSSSAGADKDKEKSLKGTLSSTQGQGNVEKVKGVGSQSESTKTEPLSSERKGVSRALSAAIL 3618          
BLAST of Ggra8747.t1 vs. uniprot
Match: R7Q582 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q582_CHOCR)

HSP 1 Score: 115 bits (288), Expect = 1.260e-25
Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 0
Query:    1 MDHLSARQRAQLFSLKGKLLAQLGREDESVEAISTALFTSADVGSAWLSWGEHCDDMQKKAAEDPSAFASFADNID-----SDDKQIEELMGVSNGYAAELAFSESAVKCYLKAVRFGSRRARAFLSRVLRLLSLDVQSR 135
            MDH ++RQ+AQLF+++GKL A LG+E ++V+A + AL TS+DV SAWL+WG HCD   ++ +   ++ A   D I      +D+K+  E         A L + E+AV CYL+AVRFGSR++R +L RVLRLL+ DV +R
Sbjct: 3506 MDHFNSRQKAQLFTVRGKLCAALGKEADAVDAFTVALSTSSDVSSAWLAWGLHCDAQLQRLSSQLTS-APRRDGIQGAKASNDNKKETE---------AALEWREAAVNCYLQAVRFGSRKSRLYLPRVLRLLTTDVYNR 3635          
BLAST of Ggra8747.t1 vs. uniprot
Match: A0A5J4YRP8 (Transcription-associated protein 1 n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRP8_PORPP)

HSP 1 Score: 87.4 bits (215), Expect = 5.970e-16
Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    1 MDHLSARQRAQLFSLKGKLLAQLGREDESVEAISTALFTSADVGSAWLSWGEHCDDMQKKAAEDPSAFASFADNIDSDDK---------------QIEELMGVSNGYAAELAFSESAVKCYLKAVRFGSRRARAFLSRVLRLLSLDVQS 134
            + H  ++Q+A+LF LKG+   +L +  E+ +A + AL  +AD+ S+WL+WG++CD    ++A   S     A +    +                    + G +  +  + ++ E+ V CYL AVRFGSRRAR F+SRVLRLLSLD  S
Sbjct: 4134 IQHFPSKQKAKLFCLKGEFFFRLKQGPEASQAYTEALRFAADLSSSWLAWGQYCDAAALESAPVASVLGGMAGSGAGPETGTXXXXXXXXXXXXXAAPRIPGAT--FNQQHSWPEATVTCYLMAVRFGSRRARMFISRVLRLLSLDSSS 4280          
BLAST of Ggra8747.t1 vs. uniprot
Match: A0A7S0ZE91 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE91_9RHOD)

HSP 1 Score: 73.9 bits (180), Expect = 1.870e-11
Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 0
Query:    1 MDHLSARQRAQLFSLKGKLLAQLGREDESVEAISTALFTSADVGSAWLSWGEHCDDMQKKAAEDPSAFASFADNIDSDDKQIEELMGVSNGYAAELAFSESAVKCYLKAVRFGSRRARAFLSRVLRLLSLD 131
            ++H S +Q+A+LF+LK +   ++   D+S +  + A+  S  +GS WL+W   C+ +             F D  ++                 E  +++SAV  YL A RFGS+RAR ++ RVLRLLSLD
Sbjct:  136 IEHFSTKQKARLFALKAEFYRRMNFFDDSNQMFAKAVSLSGTIGSTWLAWANMCNQV-------------FTDRSET-----------------EFVWAQSAVSSYLMASRFGSKRARLYVPRVLRLLSLD 236          
The following BLAST results are available for this feature:
BLAST of Ggra8747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IFJ22.710e-9172.65Transcription-associated protein 1 n=1 Tax=Gracila... [more]
R7Q5821.260e-2546.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YRP85.970e-1635.57Transcription-associated protein 1 n=2 Tax=Porphyr... [more]
A0A7S0ZE911.870e-1132.82Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003151PIK-related kinase, FATPFAMPF02259FATcoord: 3..125
e-value: 1.1E-7
score: 31.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:82540..83274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8747.t1Ggra8747.t1Gracilaria gracilis GNS1m malemRNAtig00000127_pilon 82540..83274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8747.t1 ID=Ggra8747.t1|Name=Ggra8747.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MDHLSARQRAQLFSLKGKLLAQLGREDESVEAISTALFTSADVGSAWLSW
GEHCDDMQKKAAEDPSAFASFADNIDSDDKQIEELMGVSNGYAAELAFSE
SAVKCYLKAVRFGSRRARAFLSRVLRLLSLDVQSRLSFEFTTSRLIEHQS
SLTPSASKTGQLNTGAKAEQGTQKTAAPISATGQDNGNADKQKGVSSQAE
PNKTGLLSSERKGVSRALKCGNLGRTVVDVAAVAFTAIANVGEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003151PIK-rel_kinase_FAT