Ggra8736.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8736.t2
Unique NameGgra8736.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length398
Homology
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A2V3IQ21 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ21_9FLOR)

HSP 1 Score: 146 bits (368), Expect = 9.480e-38
Identity = 87/175 (49.71%), Postives = 107/175 (61.14%), Query Frame = 0
Query:  105 DGASGDVDALVSELAIMQRVELWLELPDCSVRSLTLALYGELTPSTTANFAAPVAARAYDNKGVYRVLSQLNVQLGDTLRNGGVSGAAAPSDGRLRAKNWRLSHSAPGVLFMVVAHGYVDSRFFFTTRRGDSCYLDGRYVGFGRVQRKLDALFEQER-----AVAGEQCSLRIAS 274
            D  +G VD   +E AI  RV + L+  +     LT+ALYG + P T  NF   +     D K VYRV++ L +QLGD LRNGG SG AA   G L A+N+R+SHS PG+L MVV  G VDSRFF TTR GDS YLDGRYV FGRV+  +D L+E +R            S+RIAS
Sbjct:   68 DDKAGQVDVAENEPAITNRVFIDLQQANGRTGRLTIALYGTVVPDTVDNFLRLIDNGYRDTK-VYRVVNGLTIQLGDVLRNGGKSGRAATETGVLEAENYRISHSVPGILSMVVKDGMVDSRFFVTTRPGDSRYLDGRYVAFGRVESGMDTLYELDRIPNSNGFVRRPVSVRIAS 241          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7S0IAH7 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IAH7_MICPS)

HSP 1 Score: 95.5 bits (236), Expect = 2.450e-19
Identity = 65/165 (39.39%), Postives = 83/165 (50.30%), Query Frame = 0
Query:  262 AVAGEQCSLRIASVSGSRFSPGSFIHRGT--VYTRSSLWGTSL---------------GIVPAVPRST----------PENVTKML--VDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            AV GEQ     A +  +R +P   + R T  V +R  + G S+               G +P  PR            PE VT  +  VD++ VS    + + G  F  SL+PYL FLY L   E+K PP   FGF+FLLVFVF TIP  IYAK  Y+DILAN+D
Sbjct:    5 AVRGEQALAGAAMLPLARLAPARVVARPTLCVKSRRGVTGVSIADATGGTRPAICFPYGPIPVGPRVRFPIAPNRAVGPEAVTSAVTTVDAFGVSAEQWELIEGNLFGASLLPYLVFLYYLGMPESKMPPRALFGFKFLLVFVFGTIPCAIYAKLVYNDILANVD 169          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7S0BM62 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BM62_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 5.240e-19
Identity = 60/118 (50.85%), Postives = 74/118 (62.71%), Query Frame = 0
Query:  280 FSPGSFIHRGTVYTRSSLWGTSLGIVPAVPRSTPENVTKMLVDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            F PG+ ++ G + TR++  G S G +   P      V K+  + WSVS A    L  Q FA+SL PYLAFL  + R E  CPPL   GF+FLLVFV ATIPAGIYAK  Y+DILAN+D
Sbjct:   27 FVPGASVNTGGI-TRTAK-GVS-GSMIRRPNGRCSVVAKVFTNPWSVSSAE---LGSQLFALSLFPYLAFLRSIGREETDCPPLAVRGFQFLLVFVAATIPAGIYAKVAYNDILANVD 138          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7R9TEG7 (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TEG7_MICPS)

HSP 1 Score: 93.6 bits (231), Expect = 1.090e-18
Identity = 49/88 (55.68%), Postives = 57/88 (64.77%), Query Frame = 0
Query:  310 RSTPENVTKMLVDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            R+ P +V    VD + +SP A + L G  F  SL PYLAFLY L+R E   PP   FGF+FLLVFVF TIP  IYAK  Y DILAN+D
Sbjct:   76 RAIPVDV----VDPFGMSPEAWELLEGNLFGASLFPYLAFLYFLDRDECAIPPRAMFGFKFLLVFVFGTIPGAIYAKVAYDDILANVD 159          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7S1GS18 (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GS18_HEMAN)

HSP 1 Score: 94.4 bits (233), Expect = 1.810e-17
Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = 0
Query:  300 TSLGIVPAVPRSTPENVTKMLVDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            T + + P    +TPE      V +  +S   I+ +AG  FAVSL PYL FLY L++ E   PPL NFGFRFLLVFVFA+IPA I AKA Y DILAN+D
Sbjct:   93 TRMQLDPGGLAATPEIAN---VAATYLSTLTIEDVAGGLFAVSLFPYLGFLYHLDKEETNTPPLGNFGFRFLLVFVFASIPAAIAAKALYGDILANVD 187          
BLAST of Ggra8736.t2 vs. uniprot
Match: D8LER3 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER3_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.910e-17
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  321 VDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            V +WSV+    D  A + F  SL PYLAFL++L+R E K P    FGF FLLVFV ATIPAGIYAK  Y++ILAN+D
Sbjct:   26 VSAWSVTSITSD-FAAELFQASLFPYLAFLWLLSRKETKTPEGGTFGFAFLLVFVVATIPAGIYAKTEYNEILANVD 101          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7S0SIR7 (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIR7_9CHLO)

HSP 1 Score: 91.7 bits (226), Expect = 1.380e-16
Identity = 60/161 (37.27%), Postives = 83/161 (51.55%), Query Frame = 0
Query:  244 VGFGRVQRKLDALFEQERAVAG----EQCSLRIASVSGSRFSPGSFIHRGTVYTRSSLWGTSLGIVPAVPRSTPENVTKMLV---DSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            +  GR  R++        A +G       S  +A++ G+  +P ++  R T + R    G S G+  A  R+ P  V + LV   D + VS    + + G  F+ SL PYL FLY L   E+  P    FGF+FLLVFVF TIP  IYAK  + DILAN+D
Sbjct:   45 LNVGRFPRRVGTAMTGRAAGSGLRVRRALSNPVAALVGA--APATYRKRTTPFGRRGR-GASRGVAVAPTRAVPPEVVQDLVGLADPFGVSAERWEFIEGNLFSASLFPYLVFLYYLGMPESNMPRRALFGFQFLLVFVFGTIPCAIYAKLQFEDILANVD 202          
BLAST of Ggra8736.t2 vs. uniprot
Match: C1EEI7 (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EEI7_MICCC)

HSP 1 Score: 90.5 bits (223), Expect = 4.120e-16
Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 0
Query:  303 GIVPAVPRST----------PENVTKML--VDSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            G +P  PR+           PE VT  +  VD++ VS    + + G  F  SL+PYL FLY L   E+K PP   FGF+FLLVFVF TIP  IYAK  Y+DILAN+D
Sbjct:   47 GPIPVGPRARSPIAPNRAVGPEAVTAAVTTVDAFGVSAEQWELIEGNLFGASLLPYLVFLYYLGMPESKMPPRALFGFKFLLVFVFGTIPCAIYAKLVYNDILANVD 153          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A7S0QUT8 (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QUT8_9CHLO)

HSP 1 Score: 89.7 bits (221), Expect = 8.680e-16
Identity = 47/75 (62.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  323 SWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            +WSV+ AAI   A   F  SL+PYL FLY + R EAK PPL N GFRFLL FV ATIPAG+ AK  Y DILAN+D
Sbjct:   88 AWSVTGAAI---APTLFQASLLPYLGFLYFVGRPEAKTPPLANVGFRFLLCFVAATIPAGVIAKNQYGDILANVD 159          
BLAST of Ggra8736.t2 vs. uniprot
Match: A0A835XU58 (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XU58_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 8.900e-16
Identity = 49/98 (50.00%), Postives = 58/98 (59.18%), Query Frame = 0
Query:  303 GIVPAVPRSTPENVTKMLV---DSWSVSPAAIDGLAGQSFAVSLIPYLAFLYVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID 397
            G+ P  P   P   +  +     +W+ S   +  LA Q FA SL PYL FLY L+R E K P +  FGF FLLVFV ATIPAGIYAK HY   LAN+D
Sbjct:   14 GLAPE-PADAPRQCSTQVFPFDQAWAPSAEKLSSLAPQLFAFSLFPYLGFLYHLSRPETKAPRVTLFGFYFLLVFVGATIPAGIYAKTHYGQALANVD 110          
The following BLAST results are available for this feature:
BLAST of Ggra8736.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ219.480e-3849.71Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
A0A7S0IAH72.450e-1939.39Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S0BM625.240e-1950.85Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7R9TEG71.090e-1855.68Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A7S1GS181.810e-1754.08Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
D8LER31.910e-1758.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0SIR71.380e-1637.27Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
C1EEI74.120e-1647.66Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0QUT88.680e-1662.67Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A835XU588.900e-1650.00Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 137..260
e-value: 5.0E-12
score: 46.3
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 138..256
score: 13.281575
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 115..275
e-value: 7.4E-16
score: 60.3
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 137..256
IPR021995Protein of unknown function DUF3593PFAMPF12159DUF3593coord: 339..397
e-value: 1.3E-19
score: 70.0
IPR021995Protein of unknown function DUF3593PANTHERPTHR35473FAMILY NOT NAMEDcoord: 321..397
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 355..365
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 334..354
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 386..397
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..385
NoneNo IPR availableTMHMMTMhelixcoord: 334..353
NoneNo IPR availableTMHMMTMhelixcoord: 366..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:33043..36520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8736.t2Ggra8736.t2Gracilaria gracilis GNS1m malemRNAtig00000127_pilon 33043..36520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8736.t2 ID=Ggra8736.t2|Name=Ggra8736.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=398bp
MVSAFDAAAELASGGEAVLDFSVEGSGFVIDKRSVRLDGDGVVERGPCER
VTRHVLCFAARTFFSYDALDDTVDGVVMSGGLVHGIDRSCSAGCSMLVAQ
TADADGASGDVDALVSELAIMQRVELWLELPDCSVRSLTLALYGELTPST
TANFAAPVAARAYDNKGVYRVLSQLNVQLGDTLRNGGVSGAAAPSDGRLR
AKNWRLSHSAPGVLFMVVAHGYVDSRFFFTTRRGDSCYLDGRYVGFGRVQ
RKLDALFEQERAVAGEQCSLRIASVSGSRFSPGSFIHRGTVYTRSSLWGT
SLGIVPAVPRSTPENVTKMLVDSWSVSPAAIDGLAGQSFAVSLIPYLAFL
YVLNRSEAKCPPLLNFGFRFLLVFVFATIPAGIYAKAHYHDILANID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR021995DUF3593