Ggra8734.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8734.t1
Unique NameGgra8734.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length180
Homology
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A2V3IY62 (Imidazole glycerol phosphate synthase hisHF n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY62_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 1.850e-46
Identity = 94/166 (56.63%), Postives = 110/166 (66.27%), Query Frame = 0
Query:   14 AFFAPSRLPPAP--PQPVHRRHAVPVAVSSPPVVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRPL 177
            AF AP+ LP     P+   RR  +P A +S P VTV DYGAGNVRSL NAL L D  I++  +A     AS+LIFPG+GSFGAAM NL +R F  AL++YI DD PFLGICLGLHTLFEG EESP  PGLA+FP   R F +  D    L V H G N+V VQ P+
Sbjct:    5 AFVAPTPLPSTAVAPRAHRRRRLLPSACASRPSVTVLDYGAGNVRSLENALRLFDCHIRWANTASDISNASKLIFPGVGSFGAAMENLHDRGFVTALKRYIQDDRPFLGICLGLHTLFEGSEESPQIPGLALFPGMVRRFSV--DHTQGLAVPHIGWNTVDVQSPM 168          
BLAST of Ggra8734.t1 vs. uniprot
Match: R7QNY0 (GATase domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNY0_CHOCR)

HSP 1 Score: 139 bits (350), Expect = 4.690e-35
Identity = 84/166 (50.60%), Postives = 99/166 (59.64%), Query Frame = 0
Query:    4 LPQSLSLVAFAFFAPSRLPPAPPQPVHRRHAVPVAVSSPPVVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGN 169
            LP +   ++ AFF+P  LP  P +        P A +    VTV DYGAGNVRSL NA+ LL  DI + T+      AS+LIFPG+GSFGAAMRNL  R F   LR+Y+  D PFLGICLGLHTLFE  EESP  PGLA  P   R F+  +     L V H G N
Sbjct:  111 LPTAPPRLSMAFFSPPVLPLRPSRRRSPNRCTPRAST----VTVLDYGAGNVRSLENAVRLLGHDIHWATTPADIANASKLIFPGVGSFGAAMRNLESRGFVDPLRRYLDADRPFLGICLGLHTLFEASEESPGVPGLAWLPGTVRRFKGGD----GLAVPHIGWN 268          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A179D503 (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Thermosulfurimonas dismutans TaxID=999894 RepID=A0A179D503_9BACT)

HSP 1 Score: 125 bits (314), Expect = 1.830e-30
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   45 VTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRP 176
            VT+ DYGAGNVRS+ NAL  L  +++     +    A RL+FPG+G+FG+ MR L ER F   LR+Y+  + PFLGICLGL  LFEG EE+P   GL VFP F R FR+       L+V H G N V  ++P
Sbjct:    3 VTLLDYGAGNVRSVVNALKALGAEVRPVERPEDILSAERLVFPGVGNFGSIMRALHERGFVEPLREYLRQNRPFLGICLGLQVLFEGSEEAPGVAGLGVFPGFVRRFRV------GLSVPHIGWNGVKARKP 128          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A3B0UW07 (Imidazole glycerol phosphate synthase amidotransferase subunit / Imidazole glycerol phosphate synthase cyclase subunit HisF (Fragment) n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0UW07_9ZZZZ)

HSP 1 Score: 123 bits (309), Expect = 2.650e-30
Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   44 VVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQR 175
            ++T+ DYGAGNVRS+ NA+  L  +I+   SA     A +LIFPG+GSFG+AM  LRE  +  ALR Y+L D PFLGICLGLHTLF G EESP   GL + P     F +   P   L + H G N  G+QR
Sbjct:    1 MITLLDYGAGNVRSVRNAIKKLGFEIKDAASAKDINQAEKLIFPGVGSFGSAMTRLRELGYIDALRDYLLADRPFLGICLGLHTLFAGSEESPGIEGLGIIPGAVSRFDLGLAP---LAIPHIGWN--GIQR 127          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A7C3CKM5 (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Thermosulfurimonas dismutans TaxID=999894 RepID=A0A7C3CKM5_9BACT)

HSP 1 Score: 123 bits (309), Expect = 9.160e-30
Identity = 63/132 (47.73%), Postives = 84/132 (63.64%), Query Frame = 0
Query:   45 VTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRP 176
            VT+ DYGAGNVRS+ NAL  L  +++     +    A RL+FPG+G+FG+ MR L E+ F   LR+Y+  + PFLGICLGL  LFEG EE+P   GL+VFP F R FR+      +L+V H G N +   +P
Sbjct:    3 VTLLDYGAGNVRSVVNALRALGAEVRTVKRPEDILSAERLVFPGVGNFGSIMRALNEKGFVEPLREYLRQNRPFLGICLGLQVLFEGSEEAPGVAGLSVFPGFVRRFRV------SLSVPHIGWNGIKPVKP 128          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A7C3LBI2 (Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7C3LBI2_9DELT)

HSP 1 Score: 123 bits (309), Expect = 9.440e-30
Identity = 67/132 (50.76%), Postives = 83/132 (62.88%), Query Frame = 0
Query:   44 VVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQR 175
            ++T+ DYGAGNVRS+ NA+  L  +I+   SA     A +LIFPG+GSFG+AM  LRE  +  ALR Y+L D PFLGICLGLHTLF G EESP   GL + P     F +   P   L + H G N  G+QR
Sbjct:    1 MITLLDYGAGNVRSVRNAIKKLGFEIKDAASAKDINQAEKLIFPGVGSFGSAMTRLRELGYIDALRDYLLADRPFLGICLGLHTLFAGSEESPGIEGLGIIPGAVSRFDLGLAP---LAIPHIGWN--GIQR 127          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A450ZU04 (Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Candidatus Kentron sp. TC TaxID=2126339 RepID=A0A450ZU04_9GAMM)

HSP 1 Score: 123 bits (308), Expect = 1.370e-29
Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 0
Query:   44 VVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRP 176
            ++T+ DYGAGNVRS+ NA+  L   ++   S D  R A RLIFPG+G+FG+A+R LR   +   LR+Y+  D PFLGIC+GL  LFEG EESP   GL + P + R  R PND   AL V   G N + + +P
Sbjct:    1 MITLLDYGAGNVRSVRNAIKALGFTLRDVRSPDDIRHAERLIFPGVGAFGSAIRRLRADGYLEPLREYLHSDKPFLGICIGLQALFEGSEESPGVSGLGIIPGWIR--RFPND---ALAVPQIGWNGIRLVKP 128          
BLAST of Ggra8734.t1 vs. uniprot
Match: D6Z5M1 (Imidazole glycerol phosphate synthase subunit HisH n=2 Tax=Desulfurivibrio alkaliphilus TaxID=427923 RepID=D6Z5M1_DESAT)

HSP 1 Score: 122 bits (307), Expect = 2.070e-29
Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   43 PVVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRPLS 178
            P+VT+ DYGAGNVRS+ NA+  L   +Q          A +LIFPG+GSFGAAM +L+ R F   LRQY+  D P+LGICLGL TLFEG EESP   GL +       FR P      L V   G N + +++P S
Sbjct:    7 PIVTLLDYGAGNVRSVRNAIRKLGYTVQEVVEPADILRAEKLIFPGVGSFGAAMESLQNRGFLEPLRQYLAADRPYLGICLGLQTLFEGSEESPGVAGLGLIKGHIERFRAPG-----LAVPQIGWNGIAMRQPSS 137          
BLAST of Ggra8734.t1 vs. uniprot
Match: A0A7S0FZ57 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ57_9RHOD)

HSP 1 Score: 114 bits (286), Expect = 4.020e-29
Identity = 60/131 (45.80%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   45 VTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQR 175
            VT+ DYGAGNVRSL NAL  L  D ++  + +    A +LIFPG+GS GAAM NL ++ F   L +Y+  D P+LGICLGLH LF+G EESP   GL +             P   L+V H G N++  +R
Sbjct:    1 VTILDYGAGNVRSLENALRRLGHDFKWAQTPEDILAAEKLIFPGVGSLGAAMENLNKKNFSEPLAEYLRQDRPYLGICLGLHCLFDGSEESPEINGLGIMDGTITKIV----PSPGLSVPHMGWNTLSPKR 127          
BLAST of Ggra8734.t1 vs. uniprot
Match: imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001905ECBB (imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001905ECBB)

HSP 1 Score: 121 bits (304), Expect = 4.660e-29
Identity = 64/135 (47.41%), Postives = 79/135 (58.52%), Query Frame = 0
Query:   44 VVTVRDYGAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLRERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARCFRMPNDPQHALTVSHSGGNSVGVQRPLS 178
            ++++ DYGAGNVRSL NA+H L   +      D    A RLIFPG+G+FGA M  L ER +   LR Y+    P+LGIC+GL  LFEG +ESPN PGL + P   R F         LTV H G N V V+R  S
Sbjct:    1 MISLLDYGAGNVRSLRNAIHALGFTLTEIEKPDDILKAERLIFPGVGAFGAVMERLAERGYLGPLRDYLAAGRPYLGICIGLQILFEGSDESPNVPGLGIIPGRIRRFE-----SGTLTVPHMGWNDVRVERDCS 130          
The following BLAST results are available for this feature:
BLAST of Ggra8734.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IY621.850e-4656.63Imidazole glycerol phosphate synthase hisHF n=1 Ta... [more]
R7QNY04.690e-3550.60GATase domain-containing protein n=1 Tax=Chondrus ... [more]
A0A179D5031.830e-3049.24Imidazole glycerol phosphate synthase subunit HisH... [more]
A0A3B0UW072.650e-3050.76Imidazole glycerol phosphate synthase amidotransfe... [more]
A0A7C3CKM59.160e-3047.73Imidazole glycerol phosphate synthase subunit HisH... [more]
A0A7C3LBI29.440e-3050.76Imidazole glycerol phosphate synthase subunit HisH... [more]
A0A450ZU041.370e-2948.12Imidazole glycerol phosphate synthase subunit HisH... [more]
D6Z5M12.070e-2947.79Imidazole glycerol phosphate synthase subunit HisH... [more]
A0A7S0FZ574.020e-2945.80Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001905ECBB4.660e-2947.41imidazole glycerol phosphate synthase subunit HisF... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029062Class I glutamine amidotransferase-likeGENE3D3.40.50.880coord: 40..179
e-value: 3.3E-28
score: 100.7
IPR029062Class I glutamine amidotransferase-likeSUPERFAMILY52317Class I glutamine amidotransferase-likecoord: 44..154
IPR017926Glutamine amidotransferasePFAMPF00117GATasecoord: 47..130
e-value: 1.8E-5
score: 24.6
IPR010139Imidazole glycerol phosphate synthase, subunit HPANTHERPTHR42701IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISHcoord: 45..174
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..179
NoneNo IPR availablePROSITEPS51273GATASE_TYPE_1coord: 44..179
score: 13.107645

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:23086..23625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8734.t1Ggra8734.t1Gracilaria gracilis GNS1m malemRNAtig00000127_pilon 23086..23625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8734.t1 ID=Ggra8734.t1|Name=Ggra8734.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=180bp
MSQLPQSLSLVAFAFFAPSRLPPAPPQPVHRRHAVPVAVSSPPVVTVRDY
GAGNVRSLHNALHLLDVDIQYDTSADHNRFASRLIFPGIGSFGAAMRNLR
ERWFDHALRQYILDDCPFLGICLGLHTLFEGPEESPNQPGLAVFPRFARC
FRMPNDPQHALTVSHSGGNSVGVQRPLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029062Class_I_gatase-like
IPR017926GATASE
IPR010139Imidazole-glycPsynth_HisH