Ggra8731.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8731.t1
Unique NameGgra8731.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length135
Homology
BLAST of Ggra8731.t1 vs. uniprot
Match: A0A2V3J926 (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J926_9FLOR)

HSP 1 Score: 257 bits (657), Expect = 6.070e-77
Identity = 115/134 (85.82%), Postives = 126/134 (94.03%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPNEWL FE+ GTEIAHPIRMYCRYVD+ YMVL FD+EES+EL+Q YLTEHP+PNNENIVGYPNKKCWPR+ARMRLMKHDVNLGRALFWDIKNR+PRSV++  WDD A+FVSVYSKDNPNLLFDMVGFEVRVLP
Sbjct: 1119 MPNEWLTFENIGTEIAHPIRMYCRYVDRVYMVLRFDVEESRELIQRYLTEHPDPNNENIVGYPNKKCWPREARMRLMKHDVNLGRALFWDIKNRLPRSVSSIIWDDDASFVSVYSKDNPNLLFDMVGFEVRVLP 1252          
BLAST of Ggra8731.t1 vs. uniprot
Match: A0A2H1CAG4 (RRM_4 domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CAG4_FASHE)

HSP 1 Score: 219 bits (559), Expect = 1.850e-70
Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE+AHPIR+YCRYVD+ +M   F  EE+++L+Q YLTEHP+PNNENIVGY NKKCWPR +RMRLMKHDVNLGRA+FWDIKNR+PRS+TT +WD S  FVSVYSKDNPNLLF M GFE R+LP
Sbjct:   59 MPNDFLQFQDTATEVAHPIRLYCRYVDRFWMFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSITTIDWDSS--FVSVYSKDNPNLLFAMCGFECRILP 190          
BLAST of Ggra8731.t1 vs. uniprot
Match: A0A183BDH7 (Uncharacterized protein n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183BDH7_9TREM)

HSP 1 Score: 219 bits (558), Expect = 1.040e-68
Identity = 96/134 (71.64%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE+AHPIR+YCRYVD+ +M   F  EE+++L+Q YLTEHP+PNNENIVGY NKKCWPR +RMRLMKHDVNLGRA+FWDIKNR+PRS+TT +WD S  FVSVYSKDNPNLLF M GFE R+LP
Sbjct:  111 MPNDFLQFQDTATEVAHPIRLYCRYVDRFWMFFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSITTIDWDSS--FVSVYSKDNPNLLFAMCGFECRILP 242          
BLAST of Ggra8731.t1 vs. uniprot
Match: G3IPR4 (Pre-mRNA-processing-splicing factor 8 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=G3IPR4_CRIGR)

HSP 1 Score: 213 bits (543), Expect = 2.030e-68
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE AHPIR++CRY+D+ ++   F  +E+++L+Q YLTEHP+PNNENIVGY NKKCWPR ARMRLMKHDVNLGRA+FWDIKNR+PRSVTT  W++S  FVSVYSKDNPNLLF+M GFE R+LP
Sbjct:    1 MPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENS--FVSVYSKDNPNLLFNMCGFECRILP 132          
BLAST of Ggra8731.t1 vs. uniprot
Match: pre-mRNA-processing-splicing factor 8 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=UPI0007DA50AA (pre-mRNA-processing-splicing factor 8 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=UPI0007DA50AA)

HSP 1 Score: 213 bits (543), Expect = 1.600e-67
Identity = 93/134 (69.40%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE AHPIR++CRY+D+ ++   F  +E+++L+Q YLTEHP+PNNENIVGY NKKCWPR ARMRLMKHDVNLGRA+FWDIKNR+PRSVTT  W++S  FVSVYSKDNPNLLF+M GFE R+LP
Sbjct:   46 MPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENS--FVSVYSKDNPNLLFNMCGFECRILP 177          
BLAST of Ggra8731.t1 vs. uniprot
Match: A0A2G9T7E9 (Uncharacterized protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9T7E9_TELCI)

HSP 1 Score: 214 bits (544), Expect = 4.950e-67
Identity = 93/133 (69.92%), Postives = 113/133 (84.96%), Query Frame = 0
Query:    2 PNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            PNE+L F+   TE  HPIR+YCRY+D+ +++  F  +E+++L+Q YLTEHP+PNNENIVGY NKKCWPR ARMRLMKHDVNLGRA+FWDIKNR+PRSVTT  W+++  FVSVYSKDNPNLLFDM GFE R+LP
Sbjct:   96 PNEFLTFQDIATETVHPIRLYCRYIDRIWIMFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIEWENA--FVSVYSKDNPNLLFDMAGFECRILP 226          
BLAST of Ggra8731.t1 vs. uniprot
Match: A0A2D4MHV1 (RRM_4 domain-containing protein (Fragment) n=2 Tax=Amniota TaxID=32524 RepID=A0A2D4MHV1_9SAUR)

HSP 1 Score: 215 bits (547), Expect = 1.100e-66
Identity = 93/134 (69.40%), Postives = 115/134 (85.82%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE+AHPIR++CRY+D+ ++   F  +E+++L+Q YLTEHP+PNNENIVGY NKKCWPR ARMRLMKHDVNLGRA+FWDIKNR+PRSVTT  W++S  FVSVYSKDNPNLLF+M GFE R+LP
Sbjct:  208 MPNDFLSFQDLATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENS--FVSVYSKDNPNLLFNMCGFECRILP 339          
BLAST of Ggra8731.t1 vs. uniprot
Match: R7QE84 (Pre-mRNA processing 8 protein, PRP8 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE84_CHOCR)

HSP 1 Score: 228 bits (580), Expect = 1.410e-66
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN+WL FE+  TE AHPIRMYCRYVDK +MVL FD++ES+ELV+ YLTEHP+PNNEN+V Y NK CWPR +RMRL+KHDVNLGRA+FWDIKNR+PRS TT N+ D  +FVSVYS DNPNLLFDM GFEVR++P
Sbjct: 1140 MPNDWLSFENRETETAHPIRMYCRYVDKIHMVLRFDVDESEELVRRYLTEHPDPNNENVVDYRNKNCWPRDSRMRLIKHDVNLGRAVFWDIKNRLPRSATTINFQDDNSFVSVYSADNPNLLFDMAGFEVRIIP 1273          
BLAST of Ggra8731.t1 vs. uniprot
Match: pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064A36EB (pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064A36EB)

HSP 1 Score: 216 bits (550), Expect = 1.830e-66
Identity = 94/133 (70.68%), Postives = 112/133 (84.21%), Query Frame = 0
Query:    2 PNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            PN++L ++   TE  HPIR+YCRY+D+ +M   FD EE+++L+Q YLTEHP+PNNENIVGY NKKCWPR +RMRLMKHDVNLGRA+FWDIKNR+PRSVTT  W+ S  FVSVYSKDNPNLLFDM GFE R+LP
Sbjct:  210 PNDFLTYQDVSTETGHPIRLYCRYIDRVWMFFRFDAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTIEWESS--FVSVYSKDNPNLLFDMAGFECRILP 340          
BLAST of Ggra8731.t1 vs. uniprot
Match: pre-mRNA-processing-splicing factor 8-like n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI000C6FC39D (pre-mRNA-processing-splicing factor 8-like n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI000C6FC39D)

HSP 1 Score: 216 bits (551), Expect = 1.930e-66
Identity = 95/134 (70.90%), Postives = 114/134 (85.07%), Query Frame = 0
Query:    1 MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTEHPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVTTSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP 134
            MPN++L F+   TE AHPIR+YCRYVD+ ++ L F  +E+++L+Q YLTEHP+PNNENIVGY NKKCWPR ARMRLMKHDVNLGRA+FWDIKNR+PRS TT  W++S  FVSVYSKDNPNLLF+M GFE R+LP
Sbjct:   59 MPNDFLSFQDKATETAHPIRLYCRYVDRIHLFLRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSTTTVQWENS--FVSVYSKDNPNLLFNMSGFECRILP 190          
The following BLAST results are available for this feature:
BLAST of Ggra8731.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J9266.070e-7785.82Pre-mRNA-processing-splicing factor 8 n=1 Tax=Grac... [more]
A0A2H1CAG41.850e-7071.64RRM_4 domain-containing protein n=1 Tax=Fasciola h... [more]
A0A183BDH71.040e-6871.64Uncharacterized protein n=1 Tax=Echinostoma capron... [more]
G3IPR42.030e-6869.40Pre-mRNA-processing-splicing factor 8 n=1 Tax=Cric... [more]
pre-mRNA-processing-splicing factor 8 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=UPI0007DA50AA1.600e-6769.40pre-mRNA-processing-splicing factor 8 n=1 Tax=Cric... [more]
A0A2G9T7E94.950e-6769.92Uncharacterized protein (Fragment) n=1 Tax=Telador... [more]
A0A2D4MHV11.100e-6669.40RRM_4 domain-containing protein (Fragment) n=2 Tax... [more]
R7QE841.410e-6673.88Pre-mRNA processing 8 protein, PRP8 n=1 Tax=Chondr... [more]
pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00064A36EB1.830e-6670.68pre-mRNA-splicing factor 8 homolog n=1 Tax=Sorex a... [more]
pre-mRNA-processing-splicing factor 8-like n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI000C6FC39D1.930e-6670.90pre-mRNA-processing-splicing factor 8-like n=1 Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..134
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000127_piloncontigtig00000127_pilon:5787..6191 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8731.t1Ggra8731.t1Gracilaria gracilis GNS1m malemRNAtig00000127_pilon 5787..6191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8731.t1 ID=Ggra8731.t1|Name=Ggra8731.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=135bp
MPNEWLGFESNGTEIAHPIRMYCRYVDKGYMVLGFDMEESKELVQGYLTE
HPEPNNENIVGYPNKKCWPRQARMRLMKHDVNLGRALFWDIKNRVPRSVT
TSNWDDSATFVSVYSKDNPNLLFDMVGFEVRVLP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027652PRP8
IPR012337RNaseH-like_sf