Ggra868.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra868.t1
Unique NameGgra868.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1013
Homology
BLAST of Ggra868.t1 vs. uniprot
Match: A0A2V3IX91 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX91_9FLOR)

HSP 1 Score: 736 bits (1901), Expect = 4.050e-247
Identity = 525/1155 (45.45%), Postives = 649/1155 (56.19%), Query Frame = 0
Query:    1 MPPSAEEALPSFVLDYLSKRGYSRAVEGMRIDQHHKREQPIALSFLDAPSSFLDRWFAMFWDVYAANLVQRTPLPPHHLHAQQQLSQXXXXXXXXQLHHNPNIPQHPAHNPLALQAQMHPNPSEVDP-TQPATHPNHSPAMAQQSALFANAARQRPPAHVLPPHLRNMSNQQLSAAMRHNHPALLSRHMR-REDPRRALSLQMTPNSLQLDTSLTNPLASDLMVDNSIDPVLPPT-TNXXXXXAAAHVXXXXXXXXXXXXXXNNPRNPMSHMQSRAHGSTPLPMRAPTPPSAKSRAYALQPGLSNDAASSASRRGPIDHNSAQRPYDCAVQDDSQPRSNPNGNSSTMHSRKRTAHHLPPKSPAATPNDNASSRLQFSASDSVGQVKRRRSYSGY------------------------------------------------------------------------------------------------------------------------------------------AAVAAGRTDQRYLAHGAASRNGMRLTPRSNPLANPMAFQAQDGQKRRDSFPAGHAASRNAAHAIEQDSAKMNVDSNSLPTAFRMGDPTLTMSQPLQPHSQALPNASGSRVSAPQGYVMPNGQISLDMSAQGFPYLPCMDGKDLAGILPQSSMTVAGVTAAMPTIGNPANIGVVPKKASSNSRAQSRSTKNEKSVAGQNRTGGEKPSDDMHIPDRLQRSTQRLREGTVQKENADALAKIK-SEANANHKLGVSVQSGSAKNPMSSQAGKSVDAKDASRARLAHEATKVKSSNGLPPSGNMPNALAPGVNLNMKNKTVDDAKTENRSTKSDRHMSTNRASTPSQKSTASGGSNAVERRASQGSGTSKRARNRTKGRSSGGGKRSRGDRGQVARHNMSRNNIAAQTPRSTITDVKNATSVGAKMKATSRSVQVDRSNALIHVNSVMGAMADPSQTPDKRKQSKNDGSAKTRTPVPRQPQAVGEEPKLTY-ETAAEKVNEQGGHDPQHGRQSPSALAASGPAQLLDMLQPSTGGARSIDNAGLDAVDGISQFGIVTGGHNGKVNGGNGANYTYGLPPFLSAGVEEERMLGNIGS---MLNNMQDTVELGSTDFEDDSLLGPADPGDF 1009
            M PSAE+ALP+FV+DYL+KRGY  AVEGM++DQHHKREQPI  +  D+P+ FL  WF+ FWDVYA  LV RTP P H          XXXXXXXXQL HNPN+PQH   NP  +Q  MHPN S+VDP      HP+H+P + Q  ALFANA+R R    +     RN+ N  L  AMR+N  AL++  MR R+DPRR LSLQ+ PNSLQLDTSLTN L S+L+  NSI  VL     N      AA   XXXXXXXXXXXX  NPRN + HM SR H S P+PMRAPTPPSAKSR Y  QPGL++DA SSASRRGP+DH  A R Y+ AVQD+S PR NPNG +ST HSRKRTAHHLPPKSPA++PNDN SSRLQ S S+     KRRRSY+GY                                                                                                                                          A   A R D +++AH AA R+ MRL P SN LAN + F  Q+  ++R +F   H   RN AH     SAKM  DS SL  A RM DP+L MSQ LQ  SQ +PNAS +RVSAP G+ MP  Q+ LDM+ QGF Y+P MDGKD + ILPQ+++ VAGV A+M  +  P        ++ + +RA SR+ KN+ +++   R   +KP DD+ I DR+ R   RLRE  +QK+N D   K+K +E +A  K G + QS +AKN   +QA +S+D KD SR+       K K    L  SG+MP  +    N  MKNK  ++ + ENRSTKSDR+  T                 AVERR SQ SGT +R R+R KGRS GG +RSR   GQ AR+N SR+  AAQTPR  + +VK+AT++ A+MKA+ R+ Q D S  ++H N+VM  + D S  P+K + +KND +   RT   RQ    GEE KL +  +A +  NEQ   + Q G QSP  L+A+G AQL  M                   +GI+ F IV  GHNGKVNG  GANY Y L  FL  GVEEE MLGNIG+   MLNNMQ+ V+LGST+FE+DS+LG AD GD 
Sbjct:    1 MAPSAEQALPAFVMDYLAKRGYLNAVEGMKVDQHHKREQPIPFAVFDSPNPFLIIWFSFFWDVYAPKLVNRTPKPSH---------PXXXXXXXXQLRHNPNVPQHTPPNPH-IQXXMHPNSSQVDPPAHSIAHPSHTPPVPQHPALFANASRHRSNPQLFSTQFRNIPNPHLPPAMRNNPNALMNHQMRPRDDPRRPLSLQLAPNSLQLDTSLTNSLTSELLDANSIGNVLVAARANHRNEPTAA--AXXXXXXXXXXXXATNPRNAVPHMHSRPHASAPVPMRAPTPPSAKSRPYPAQPGLASDAHSSASRRGPMDHPGAVRHYENAVQDES-PRPNPNGTAST-HSRKRTAHHLPPKSPASSPNDNMSSRLQLSVSEPAAP-KRRRSYAGYNHSAALSQRMPHQLVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPQXXXXXXHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHQRMALPQANRNDPQFMAHNAA-RSSMRLPPHSNQLANQLPFPTQE--QKRQAFLQVHGNGRNPAHVSNPQSAKMTADSASLRQALRMDDPSLAMSQALQAQSQGIPNASNARVSAPPGFRMPANQLPLDMTGQGFVYVPQMDGKDFSSILPQNAVPVAGVNASMQNMRVPNATSGPNNQSHATTRAPSRTMKNDSNLSNPGRNVNDKPQDDLPISDRMSRGAARLREEALQKDNGDQSVKLKQAETSAKAKSGANSQSANAKNAQQNQAVQSIDNKDTSRSXXXXXXXKGKGGVSLSRSGSMPATMTSMANPGMKNKGGENGEGENRSTKSDRNTPTXXXXXXXXXXXXXXXXXAVERRPSQ-SGTPRRNRSRNKGRSPGGSRRSRAG-GQSARNNSSRSTSAAQTPRVAVNEVKSATALAAQMKASGRNTQGDLSAPMMHANAVMSGLPDGSG-PEKARHAKNDANTAART-AGRQAAKAGEEAKLGFGSSAGDNNNEQAAQNAQQGGQSPGPLSATGEAQLFGM-------------------EGIAAFSIVGSGHNGKVNGSTGANYPYELSNFLGTGVEEETMLGNIGNIGTMLNNMQENVDLGSTEFEEDSILGVADAGDL 1114          
BLAST of Ggra868.t1 vs. uniprot
Match: R7Q7L4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7L4_CHOCR)

HSP 1 Score: 67.4 bits (163), Expect = 1.380e-7
Identity = 104/372 (27.96%), Postives = 161/372 (43.28%), Query Frame = 0
Query:  653 SSQAGKSVDAKDASRARLAHEATKVK----SSNGLPPSGNMPNALAPGVNLNMKNKTVDDAKTENRSTKSDRHMSTNRAS-TPSQKSTASGGSNAVERR--ASQGSGTSKRARNRTKGRSSGGGKRSRGDRGQVARHNMSRNNIAAQTPRSTITDVKNATSVGAKMKATSRSVQVDRSNALIHVNSVMGAMADPSQTPDKRKQSKNDGSAKTRTPVPRQPQAVGEEPKLTYETAAEKVNEQGGHDPQHGRQSPSALAASGPAQLLDMLQPSTGGARSID-----NAGLDAVDGISQFGIVTGGHNGKVNGGNGANYTYGLPPFLSAGVEEERMLGNIGSMLNNMQDTVELG---STDFEDDSLLGPADPGDF 1009
            SS+A K+++    SR R    A K      SS  LP  G  P+ +  G   + +++   +A  ENRSTKSDR  S  R   T SQKSTASGGS AVE R  A+  SGT +R R                +R      N S    +AQ  R+   + KNA +   +  A +       ++ ++  +S++      S T + R Q++        +    +   +   PKL ++        +       G Q PSA       +     QPS GG    +     +AG  A + +     + G  +GK+   +G+NY Y + P+++ GV++     ++G M++  Q    LG     D ED  +LG  DPGD 
Sbjct:  669 SSRAMKTIETTGGSRGRHMDGANKNNALNTSSGALPHMGLSPSLVGSG---SKRDRVATEADMENRSTKSDRQASGTRGGGTQSQKSTASGGSGAVEGRTQAANSSGT-RRGRXXXXXXXXXXXXXXXXERAPPRGGNGSXGGTSAQAARNNAQEQKNAVTANLQRSAEASRTSQAGADRMLGSSSMLMPPRGSSATHENRSQTQKGERGARVSSKHVEETDLQRAPKLPFDLGDANATAESRGPDVSGDQQPSANHMHSGLEFFP--QPSIGGGGRTNGDLSNDAGEKAFE-VQPLNFMPG--DGKLGNQSGSNYGYEMSPYMANGVDDT----DLGDMMSP-QIPANLGFGPPPDLEDAGMLG-VDPGDL 1025          
The following BLAST results are available for this feature:
BLAST of Ggra868.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX914.050e-24745.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7L41.380e-727.96Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..463
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..889
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 988..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 705..721
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..756
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 637..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 594..627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 822..918
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..591
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:14237..17704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra868.t1Ggra868.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 14237..17704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra868.t1 ID=Ggra868.t1|Name=Ggra868.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1013bp
MPPSAEEALPSFVLDYLSKRGYSRAVEGMRIDQHHKREQPIALSFLDAPS
SFLDRWFAMFWDVYAANLVQRTPLPPHHLHAQQQLSQQQQTQQQHQLHHN
PNIPQHPAHNPLALQAQMHPNPSEVDPTQPATHPNHSPAMAQQSALFANA
ARQRPPAHVLPPHLRNMSNQQLSAAMRHNHPALLSRHMRREDPRRALSLQ
MTPNSLQLDTSLTNPLASDLMVDNSIDPVLPPTTNPPNDPAAAHVVAVAA
AAAAQAAAANNPRNPMSHMQSRAHGSTPLPMRAPTPPSAKSRAYALQPGL
SNDAASSASRRGPIDHNSAQRPYDCAVQDDSQPRSNPNGNSSTMHSRKRT
AHHLPPKSPAATPNDNASSRLQFSASDSVGQVKRRRSYSGYAAVAAGRTD
QRYLAHGAASRNGMRLTPRSNPLANPMAFQAQDGQKRRDSFPAGHAASRN
AAHAIEQDSAKMNVDSNSLPTAFRMGDPTLTMSQPLQPHSQALPNASGSR
VSAPQGYVMPNGQISLDMSAQGFPYLPCMDGKDLAGILPQSSMTVAGVTA
AMPTIGNPANIGVVPKKASSNSRAQSRSTKNEKSVAGQNRTGGEKPSDDM
HIPDRLQRSTQRLREGTVQKENADALAKIKSEANANHKLGVSVQSGSAKN
PMSSQAGKSVDAKDASRARLAHEATKVKSSNGLPPSGNMPNALAPGVNLN
MKNKTVDDAKTENRSTKSDRHMSTNRASTPSQKSTASGGSNAVERRASQG
SGTSKRARNRTKGRSSGGGKRSRGDRGQVARHNMSRNNIAAQTPRSTITD
VKNATSVGAKMKATSRSVQVDRSNALIHVNSVMGAMADPSQTPDKRKQSK
NDGSAKTRTPVPRQPQAVGEEPKLTYETAAEKVNEQGGHDPQHGRQSPSA
LAASGPAQLLDMLQPSTGGARSIDNAGLDAVDGISQFGIVTGGHNGKVNG
GNGANYTYGLPPFLSAGVEEERMLGNIGSMLNNMQDTVELGSTDFEDDSL
LGPADPGDFNRA*
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