Ggra8664.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8664.t1
Unique NameGgra8664.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1000
Homology
BLAST of Ggra8664.t1 vs. uniprot
Match: A0A2V3II64 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II64_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 3.830e-87
Identity = 174/455 (38.24%), Postives = 238/455 (52.31%), Query Frame = 0
Query:  643 SPDGIVVSVNAMGHFLPESSRPLSRQAFSCDPSNAVWHGLCNVALNKLNTELNAAGLTLDRNDLLLVYDDPEDKKF--GKQCTASLTKEHVHAEARITHRNALSFNGNSLSKPFALRFQVPVHLSARADMKQRWGFYYPHISGFRIKKKCKNVGSDSFALKASLSTIADVVVGFNFQPSLSTTRSGDYVITIKPVVSMVSNLLSGD-------------------DWLNQLGQ-----------------NLAWDVGSSVILGIGSLPAPIENLIWEQFTSYAEKLAEKRARGFGADVEDKLNHKVKRALNLNAAGIRKIVVKRDFLTILRLGGPDANVIIPPGTN------------------------------------------------------FRRPSPSQSP--------RSRCYEHAHSVCANSCNPEFPGYCGECSFYLNECDRM 997
            SP  + V+V A           +S + F CD SNA+   LC  ALNK+N+EL  AG+++DRN +L VYDDP ++K   GK C+ +  + H H EAR      L   GNSL++PF LR ++PV LS R D+KQR+G   P IS F+I+ KCKN  SDS++LK SLST A++ +GF  +PSL T  SGDY I ++P+V +V+ L S D                    W + L Q                 N+AWDVGS+V+LGIGSLPAP+E L+W+  ++  E LA K+ARG+G D+ED LN KV+RALN+ + G R I++KR+F+ +LR  G + NV + P TN                                                        RPSP+  P        R  CY  AHSVCA +C       CGEC + +++CDR+
Sbjct:   33 SPTDLSVAVKA---------SQVSTEVFRCDSSNAIHRALCRAALNKVNSELEGAGISIDRNGVLFVYDDPSNRKIQTGKSCSVTAEQRHQHLEARFKRSARLRLKGNSLTEPFVLRLKLPVTLSGRVDIKQRFGAKVPQISSFKIRMKCKNYASDSYSLKGSLSTNANMGIGFYLKPSLGTVASGDYAIVLQPIVRVVTKLESTDIRLDASGVSPIAAVWSSVVGWTSTLTQVADAALNGKSITAVIERNVAWDVGSAVVLGIGSLPAPLEKLLWKLLSTVGEFLARKKARGYGEDIEDDLNKKVRRALNVGSDGKRVIIIKRNFMEMLRKQGENENVFVRPPTNPTADCMTGVNYMCSICRGCSQCVSERNRCRAQQRAVTQKWTPKNLIHSVPKIAALARPSPNPKPAPRGTVQDRDACYRRAHSVCA-ACRG-----CGECRYLISQCDRI 472          
BLAST of Ggra8664.t1 vs. uniprot
Match: A0A2V3IQH3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQH3_9FLOR)

HSP 1 Score: 192 bits (489), Expect = 3.690e-50
Identity = 112/336 (33.33%), Postives = 178/336 (52.98%), Query Frame = 0
Query:  662 SRPLSRQAFSCDPSNAVWHGLCNVALNKLNTELNAAGLTLDRNDLLLVYDDPEDKKF--GKQCTASLTKEHVHAEARITHRNALSFNGNSLSKPFALRFQVPVHLSARADMKQRWGFYYPHISGFRIKKKCKNVGSDSFALKASLSTIADVVVGFNFQPSLSTTRSGDYVITIKPVVSM------------------------------------VSNLLSGDDW---LNQLGQNLAWDVGSSVILGIGSLPAPIENLIWEQFTSYAEKLAEKRARGFGADVEDKLNHKVKRALNLNAAGIRKIVVKRDFLTILRLGGPDANV-IIPPGT-NFRRP 954
            S+ +S +   C  +N +  G+C+VAL K+N+EL AAG+ + ++ +L  YDDP+      G  C+ +    H HA A  +  + L   GNS+S   ALR ++PV +SAR D++QR+G         R   KCK    D+F+LKA   T ADVVVG +  PS     +G++ +T+ PV++                                     ++ L  GD        + ++L +D G+ V+LGIG+LP P+E L+++  ++ AE+  E++A+G G  +EDKLN +++RAL L   G R IV+K +FL +LR      ++ ++PP T   RRP
Sbjct:   45 SKQISPEVLRCKSTNPIVRGICDVALGKVNSELEAAGIAIRKDGVLFTYDDPKHVSIPTGHSCSVTAKVRHKHATAHFSSSSTLRLTGNSISDKLALRLKLPVRVSARVDVRQRFGA--------RFFGKCKRYARDTFSLKAKADTRADVVVGLSLNPSFRKLSNGNFELTLMPVIAALFELDDLDLKFRVSKVSPITPIWTFIVGFKSTLLKSITGLFKGDSLKSIFKDIKRSLLYDFGAPVVLGIGALPRPLETLVFDALSNIAERKIERKAKGVGESLEDKLNDELRRALKLGPDGKRVIVIKGNFLDLLRSSPNTKDLFVVPPRTVTPRRP 372          
BLAST of Ggra8664.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 147 bits (370), Expect = 4.320e-32
Identity = 98/283 (34.63%), Postives = 144/283 (50.88%), Query Frame = 0
Query:  378 ALNQIEEYTILQSEDPGWFLARAFEFTSRTTHGFFRAFASDFNNHLKSSAELLCGRSPTFGANALPNDKCAAQNLLRSKWTGVLEGLGMKQRNPAPDIDGSEAISNVMSATATSLQSLRKDVLVSILVKVGHQPASSATRPVLKAKILQLKKDVSEGLIEL----VPVTATAPTIQELTTALRKSLYEASLDAWFMKPLAATAGMKEGSFNEQKVLKSLPRFFENCRVTCSIALQTGTHMRSQYES----KHTIHRIRTIGLIGSRSIRLPAGSPDGIVVSVN 652
            AL +I+  T  QSEDP WFL RAF FTSRT H F      DF NH+ S A  L G+    G++ LP D  + + LLR KW  V +  GM+        +  +    +   + + +    ++ L  +L       + + ++ VL   +LQL+ D+  G +EL        + + ++ E  + + + L EASL AW MKPL +TAGMKEGS NE +VLK++P F    R   + A   G     +Y      K  I  I ++GL+ S+S  + A SPDGI+   N
Sbjct:  627 ALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKTVLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRG--AYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKN 907          
BLAST of Ggra8664.t1 vs. uniprot
Match: R7Q9D7 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 114 bits (285), Expect = 3.840e-22
Identity = 76/228 (33.33%), Postives = 113/228 (49.56%), Query Frame = 0
Query:  374 RLGLALNQIEEYTILQSEDPGWFLARAFEFTSRTTHGFFRAFASDFNNHLKSSAELLCGRSPTFGANALPNDKCAAQNLLRSKWTGVLEGLGMKQRNPAPDIDGSEAISNVMSATATSLQSLRKDVLVSILVKVGHQPASSATRPVLKAKILQLKKDVSEGLIELVPVTATAPTIQEL----TTALRKSLYEASLDAWFMKPLAATAGMKEGSFNEQKVLKSLPRFFE 597
            R+   L Q+   T LQSEDP WFL RAF FTSRT+ GF +A A D+   +   A LL G   T G  AL  +    +  ++ KW  ++   G++  +           + +   +AT + S  K  L  IL            +  L A + QLK DV+   ++L        + +EL       +  +L +ASL AW MKPL ATAGM+EG+ NE K+++++P F +
Sbjct:  616 RVQQVLAQVRCLTYLQSEDPVWFLLRAFRFTSRTSFGFVQAIARDYGTRINGLAWLLQGSVLTPGTEALSEEVEEVREHIKMKWESIIAVFGLRLADLPVTSSRRTVAARLRGMSATRITSSTKSDLQEILAVFDRALDGRVPKSSLVAAVRQLKIDVAADTVDLDGSEREDASPEELLIQSAAKVSHALRDASLHAWVMKPLIATAGMREGTRNEDKIVEAIPEFMK 843          
BLAST of Ggra8664.t1 vs. uniprot
Match: A0A2V3IV24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 99.8 bits (247), Expect = 3.650e-21
Identity = 49/75 (65.33%), Postives = 57/75 (76.00%), Query Frame = 0
Query:  300 MAVFDVFLPTFVLEKLRVYVNRVLSKRSRPTATLLELKGVIVTHVLAASYGTSVSIMTSCENHEFYFQTGICGDR 374
            M VFDVF PT +L KLR YVNRVLS R     T++E KG+IV HVLAASYGT+VS+MT  E+ EFY+QTGI G R
Sbjct:    1 MNVFDVFFPTSLLGKLRSYVNRVLSARKEKPTTVMEFKGIIVNHVLAASYGTTVSVMTYTESEEFYYQTGILGKR 75          
The following BLAST results are available for this feature:
BLAST of Ggra8664.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3II643.830e-8738.24Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IQH33.690e-5033.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKF54.320e-3234.63Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q9D73.840e-2233.33EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3IV243.650e-2165.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:405775..422953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8664.t1Ggra8664.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 405775..422953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8664.t1 ID=Ggra8664.t1|Name=Ggra8664.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1000bp
MPQPSEHSSDPRVCVVTPSPVKQPRSRLSQSSKPCLVHEDELISSPPMIF
TQHSDGNCDVGPQDAYQSSQQSEDGHENSVYSVAPTEEMNVDEAVQQEKS
SNKDSTVDILGVPRQVVVPLEGNDIPTDSDSSFEPADHAHLFHEGASNAS
SLPSSQAIITENEVTALHDTSEDFISTMAPQWISNTTEERTTATEDFWSC
LFAEPCDVLQEHSLEGNYTNDEHIHDVSEERQSTNQVGGLKGWKYAGAFE
DGSIGIDNADSLLERRFLTESNKMLDNVVEEIKVNGPSSGQMDNTALTRM
AVFDVFLPTFVLEKLRVYVNRVLSKRSRPTATLLELKGVIVTHVLAASYG
TSVSIMTSCENHEFYFQTGICGDRLGLALNQIEEYTILQSEDPGWFLARA
FEFTSRTTHGFFRAFASDFNNHLKSSAELLCGRSPTFGANALPNDKCAAQ
NLLRSKWTGVLEGLGMKQRNPAPDIDGSEAISNVMSATATSLQSLRKDVL
VSILVKVGHQPASSATRPVLKAKILQLKKDVSEGLIELVPVTATAPTIQE
LTTALRKSLYEASLDAWFMKPLAATAGMKEGSFNEQKVLKSLPRFFENCR
VTCSIALQTGTHMRSQYESKHTIHRIRTIGLIGSRSIRLPAGSPDGIVVS
VNAMGHFLPESSRPLSRQAFSCDPSNAVWHGLCNVALNKLNTELNAAGLT
LDRNDLLLVYDDPEDKKFGKQCTASLTKEHVHAEARITHRNALSFNGNSL
SKPFALRFQVPVHLSARADMKQRWGFYYPHISGFRIKKKCKNVGSDSFAL
KASLSTIADVVVGFNFQPSLSTTRSGDYVITIKPVVSMVSNLLSGDDWLN
QLGQNLAWDVGSSVILGIGSLPAPIENLIWEQFTSYAEKLAEKRARGFGA
DVEDKLNHKVKRALNLNAAGIRKIVVKRDFLTILRLGGPDANVIIPPGTN
FRRPSPSQSPRSRCYEHAHSVCANSCNPEFPGYCGECSFYLNECDRMTA*
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