Ggra8660.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8660.t1
Unique NameGgra8660.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length308
Homology
[Close]
BLAST of Ggra8660.t1 vs. uniprot
Match: A0A835Y0H6 (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0H6_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 2.520e-13
Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0 
Query:   46 PAQQQLVDFIAQHHANICTLTIVNDDVESRTVLNFGRAGEMPNLKRLNLSCVRMRAIAFSASHAPCLETLHIDNPIGPKGDDLILDLALPELKELKLDYCRLDSRSDLGLSLTNC--LLRFLSHKMWFVYGPNYMV---LPNCKLFVLTGSDGTGQIEILSAPNLQTVNLACCYDI 216
            P  Q  ++ +A     + +LT+  +  E    L+F      P L  L L+C  +R + F   + P L+TL I+N  G  G D I DL LP L+ L L++  +D  S  G SL+ C  L+    +K W   GP+ +    LPNC+   L  SD    +  L AP LQ++NL  C+ +
Sbjct:   61 PIDQDTLEHLASSFPRLESLTLRPEYDEGYPELDFDDV-RFPELTALELNCCPIRNLCFGPDNTPKLKTLSIENATG--GVDTI-DLQLPHLESLHLEFVTVDDCSGFGASLSACPSLVNVTGYKFW---GPDQVYDISLPNCESLSLPRSDSLEGLR-LYAPKLQSLNLQGCFSL 228
The following BLAST results are available for this feature:
BLAST of Ggra8660.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Y0H62.520e-1332.95Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 47..219
e-value: 1.8E-8
score: 35.1
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 80..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:372251..373494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8660.t1Ggra8660.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 372251..373494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8660.t1 ID=Ggra8660.t1|Name=Ggra8660.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=308bp
MALQLYSTRATSVPTALLPIRSPPRHGPRFRAQLLRRRRLALGLRPAQQQ
LVDFIAQHHANICTLTIVNDDVESRTVLNFGRAGEMPNLKRLNLSCVRMR
AIAFSASHAPCLETLHIDNPIGPKGDDLILDLALPELKELKLDYCRLDSR
SDLGLSLTNCLLRFLSHKMWFVYGPNYMVLPNCKLFVLTGSDGTGQIEIL
SAPNLQTVNLACCYDIWRFRIWEINKRITENDVKSVNGKRNQSPNRIVRL
WFGNAMDSLEHRPQLYYMSSLPQCTVSHFNVDLREDSITEAEGTRVHLTK
EAVLFMD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf