Ggra8659.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8659.t1
Unique NameGgra8659.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length558
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8659.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..400
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..183
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 412..429
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 401..411
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 430..557
NoneNo IPR availableTMHMMTMhelixcoord: 188..210
NoneNo IPR availableTMHMMTMhelixcoord: 384..401
NoneNo IPR availableTMHMMTMhelixcoord: 164..183
NoneNo IPR availableTMHMMTMhelixcoord: 411..428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:352474..354147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8659.t1Ggra8659.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 352474..354147 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8659.t1 ID=Ggra8659.t1|Name=Ggra8659.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=558bp
MPYPSAPTHSSHNHRHSASPKPTSAKFMSPAASTQPTPATESRANRSSSS
PLSSPSGCSPSAKLHSPPPPASAPSTSGVGNMAPHVPPLFVTPCSAIASF
SDALVLMCSGSASSLGTEAQCCKNPSFSHQDFQRLADTIRAVVAEYVHSV
QGQSSTTPPWFSTVGIIRVVVLALSLVLSYILIDPFGFPFIWVTLFELMF
VDAMFCSIVAKKQWTVCGNGTVISTADEMLYVFNKPRSLLHRIPTSCVSS
FRITLVDWKSEQPQQQALNSQRSSYCVEIVTMEKTILLGNCADHSSTALF
VEEANNRLQALRERGMVQPMKFTNVYAGDNPYSATQLPVTSELVNDKAIT
SELLNMAIKVKRKGKESVQIGWYHPGESHYLPSLWRWFHLAFLVIPGWFL
VRDGFNFTDVMLARRVMFFYLVTTFFAACRNSRAWRTLVGTTRRGYLFGL
NGLAFLLFRRHYVSVSELISIVVNRSQVDKMRSTLEKCKTSAVNGPRLEL
QLSFRSGKNMVLKSLYPYQAIIIAKEIFGLISSEAVESAHMGGQIEDDDE
FGLLEAE*
back to top