Ggra8653.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8653.t1
Unique NameGgra8653.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length221
Homology
BLAST of Ggra8653.t1 vs. uniprot
Match: A0A2V3J5G9 (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G9_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 1.360e-39
Identity = 81/196 (41.33%), Postives = 117/196 (59.69%), Query Frame = 0
Query:   33 RLTASELFERTLECYLTLEIQRSESLPLGQSQNANQAAEV---------DQSVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVREVLSFDDRQFLALREKLRTCVY 219
            RL++ +L    L+CY+TL I+ + +    Q  N   ++           + SVF + + P+ITP +YLRRL    +CS S  I+AF+Y+ KI+  R   L VNA S+HRLLL AT+LA K +DD  YDN HFAK+GG+DV E+N L   ML +L ++L VS +Q+  FE+ ++  VL   D  +  L E+LR   Y
Sbjct:   62 RLSSCDLLISVLDCYMTLHIRANSATATPQLCNQPSSSXXXXXXXXPASEPSVFHALQAPSITPSEYLRRLSRYAFCSRSVFIVAFYYLHKIAQKRSLNLCVNALSVHRLLLTATLLATKMMDDVLYDNAHFAKVGGLDVAELNMLXXXMLHMLQFELVVSTDQFERFEKRVLTHVLHCHDSSYFVLHERLRNMGY 257          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0BCB8 (Cyclin n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BCB8_PARTE)

HSP 1 Score: 105 bits (262), Expect = 4.150e-25
Identity = 49/119 (41.18%), Postives = 81/119 (68.07%), Query Frame = 0
Query:   75 SVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFER 193
            S+F +++ P+IT  +YL+R+ +  +CS    ++A  Y+ ++   +  +LV+N+H IHR LL + + A KF DD +Y N ++AK+GGV++ EIN LE+E L+ + Y LFV  +QYA +ER
Sbjct:   31 SIFHANKAPSITIYNYLQRIAKYTHCSEQCFVIALIYLDRLQE-KHTYLVLNSHCIHRFLLMSLLTAIKFQDDDYYKNEYYAKVGGVNLKEINVLEQEFLEYMDYQLFVDEQQYAIYER 148          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0DGW5 (Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DGW5_PARTE)

HSP 1 Score: 103 bits (257), Expect = 2.300e-24
Identity = 50/126 (39.68%), Postives = 83/126 (65.87%), Query Frame = 0
Query:   69 AAEVDQ-SVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFER 193
            A EV+  S+F +   P I+  +YL+R+ +  +CS    ++A  Y+ ++   +  +LV+N+H IHR LL A M A KF DD +Y N ++AK+GG++V EIN LE+E L+ ++Y+LF+  +QY  +E+
Sbjct:   24 ALEVESNSIFHAMAAPAISIYNYLQRINKYTHCSEQCFVIALIYLDRLQE-KHSYLVLNSHCIHRFLLLALMTAIKFQDDDYYKNEYYAKVGGINVKEINRLEQEFLEYMNYELFIDEQQYLVYEK 148          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0BXI4 (Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BXI4_PARTE)

HSP 1 Score: 100 bits (248), Expect = 6.040e-23
Identity = 48/124 (38.71%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   74 QSVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVR 197
            Q+VF +++ P+I+   YL R+    YCSN   ILA  YI +I   + + +V+N+  +HR +LA  +L+ K+ DD +Y N ++A++GG+ + E+N LEEE+L +L Y+L+VS +QY  ++  ++R
Sbjct:   40 QTVFHTNKKPSISLAKYLERIQMYSYCSNECFILALIYIDRIQE-KNQDVVINSFCVHRFMLACIILSIKYNDDDYYKNDYYARVGGITITELNKLEEELLIMLDYELYVSQKQYYFYKDKLMR 162          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0C9U1 (Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C9U1_PARTE)

HSP 1 Score: 98.6 bits (244), Expect = 1.970e-22
Identity = 47/118 (39.83%), Postives = 77/118 (65.25%), Query Frame = 0
Query:   75 SVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFE 192
            S+F S   P I+  +YL+R+ +  +CS    ++A  Y+ ++   +   LV+N+H IHR LL A + A KF DD +Y N ++AK+GG++V EIN LE+E L+ ++Y+LF+  +QY  +E
Sbjct:   31 SIFHSIAAPAISIHNYLQRISKYTHCSEQCFVVALIYLDRLQE-KHANLVLNSHCIHRFLLLAIVTAIKFQDDDYYKNEYYAKIGGINVKEINKLEQEFLEYMNYELFIDEQQYQVYE 147          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0A7S0T842 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T842_9RHOD)

HSP 1 Score: 101 bits (252), Expect = 2.220e-22
Identity = 52/125 (41.60%), Postives = 83/125 (66.40%), Query Frame = 0
Query:   77 FSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVREVLS 201
            F +S LP I+  DY  R+ +  +CS +  ++AF YI + ++ +   L ++  ++HRL++ A MLAAKF DD +Y+N ++AK+GG+ + EIN LE E L  + ++LFVS E++  FE  +V EVLS
Sbjct:   82 FDASSLPAISACDYFHRVAKYAFCSPACLMMAFIYIERGASYQ-PSLRLSPTNVHRLIITAVMLAAKFFDDVYYNNAYYAKVGGIPLQEINLLETEFLMAVGFELFVSEEEFIRFETDVVDEVLS 205          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0C823 (Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0C823_PARTE)

HSP 1 Score: 98.2 bits (243), Expect = 3.330e-22
Identity = 47/115 (40.87%), Postives = 75/115 (65.22%), Query Frame = 0
Query:   74 QSVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQY 188
            Q+ F +++ P I+   YL R+    YCSN   ILA  YI +I   + + +V+N+  +HR + A  +L+ K+ DD +Y N ++AK+GG+ + EIN LE+E+L LL Y+L+VS +QY
Sbjct:   40 QTAFHTNKKPAISLAKYLERIQMYSYCSNECFILALIYIDRIQQ-KNQDVVINSFCVHRFMFACIILSIKYNDDDYYKNDYYAKVGGITISEINKLEQELLTLLDYELYVSQQQY 153          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0EEQ5 (Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0EEQ5_PARTE)

HSP 1 Score: 98.2 bits (243), Expect = 4.190e-22
Identity = 51/133 (38.35%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   74 QSVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRL---------LLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVR 197
            Q+VF +++ P IT   Y+ R+    YCSN   +LA  YI K+   R + +V+N+H +HRL         LLA  +L+ K+ DD +Y N ++A++GGV + E+N LE ++L LL Y LFVS  QY  ++  +++
Sbjct:   40 QTVFHTNKKPQITIYKYIERIKMYSYCSNECFVLALIYIDKVQE-RNQDVVINSHCVHRLISNCYNHRFLLACILLSIKYNDDDYYKNDYYARVGGVTLQELNQLERDLLTLLDYQLFVSQTQYYYYKEKLMK 171          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0A7S1EV37 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EV37_9RHOD)

HSP 1 Score: 100 bits (248), Expect = 7.190e-22
Identity = 52/130 (40.00%), Postives = 82/130 (63.08%), Query Frame = 0
Query:   75 SVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVREVLSFDD 204
            S F   E P ++  DYL+R+    +CS S HILA +++ ++S  R     + A ++HRL + A +LA K  +D  YDN HF+K+GG+ + E+N +E +ML+ L+Y+LFVS + Y  FER ++ EV+   D
Sbjct:   48 SEFHGLEPPRVSLHDYLQRIDRYSFCSRSCHILALYFVDRLSK-RSSCFRITALNVHRLYITAFLLAVKSSEDVLYDNLHFSKVGGIYLRELNLMELKMLEELNYELFVSPDSYREFERSILDEVVKSSD 176          
BLAST of Ggra8653.t1 vs. uniprot
Match: A0A5J4Z087 (Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z087_PORPP)

HSP 1 Score: 99.0 bits (245), Expect = 1.420e-21
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   75 SVFSSSELPNITPVDYLRRLLELGYCSNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHYDNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVREV 199
            S F   E+P +  +DYL R+ +  +CS S  ++A  Y+  I+ +   + +  A ++HRL L A +LA KF +D  YDN HFAK+GG+ V E+N +E E LK L + + VS +Q+AA  R M+ EV
Sbjct:   63 SEFHGLEVPKVLLLDYLHRIEKYAFCSRSCFVVALVYLDWIAMVDCTYRL-TAFNVHRLFLTALVLAVKFCEDVFYDNAHFAKVGGITVQELNRMELEFLKALEFRMHVSEDQFAACARSMIEEV 186          
The following BLAST results are available for this feature:
BLAST of Ggra8653.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5G91.360e-3941.33Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
A0BCB84.150e-2541.18Cyclin n=2 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0DGW52.300e-2439.68Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0BXI46.040e-2338.71Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0C9U11.970e-2239.83Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0A7S0T8422.220e-2241.60Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0C8233.330e-2240.87Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0EEQ54.190e-2238.35Cyclin n=1 Tax=Paramecium tetraurelia TaxID=5888 R... [more]
A0A7S1EV377.190e-2240.00Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z0871.420e-2140.80Cyclin-U4-1 n=1 Tax=Porphyridium purpureum TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 52..181
e-value: 1.4E-23
score: 84.1
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 53..198
NoneNo IPR availableGENE3D1.10.472.10coord: 29..213
e-value: 4.4E-35
score: 123.1
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 88..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:301641..302303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8653.t1Ggra8653.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 301641..302303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8653.t1 ID=Ggra8653.t1|Name=Ggra8653.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=221bp
MAFLSSVDSSSEGVSIQTPDATAETAVLNEKKRLTASELFERTLECYLTL
EIQRSESLPLGQSQNANQAAEVDQSVFSSSELPNITPVDYLRRLLELGYC
SNSAHILAFFYIRKISNLRFEWLVVNAHSIHRLLLAATMLAAKFVDDYHY
DNPHFAKLGGVDVDEINDLEEEMLKLLHYDLFVSAEQYAAFERYMVREVL
SFDDRQFLALREKLRTCVYF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf