Ggra8651.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8651.t1
Unique NameGgra8651.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length312
Homology
BLAST of Ggra8651.t1 vs. uniprot
Match: A0A2V3IL69 (Beta-porphyranase A n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL69_9FLOR)

HSP 1 Score: 205 bits (522), Expect = 1.310e-60
Identity = 118/311 (37.94%), Postives = 166/311 (53.38%), Query Frame = 0
Query:    9 WTDDESLPSSI----PLPRAVSVPNDPNGFNDPPPSYISEQAPSGMEWKKQFGFSSEFNTERSNEVVPMSQLNRWTTDNHWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGREREIDVFEYSSSPNLNGRRRVPLANQFLMNVHSFERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFDREYFAWIGDPRPN----DRYGDFEVMYIRTWQL 311
            W +D    S+     PLP   S   DPN  N  PP  + +Q  SG E+++    S E N   +++ V  +QL  WTT+N W GR+PA+F   N   +   +V  V    S     +R   +    A  + + +G   Y  +F RS + + YG+ E   K+GDS LSSAFWLKE  G EREIDVFE+S+S   +G    P +N + MN+H F   G    D    R +N+  +LS+Q  +KIG LWT   + WY+ND  +R++ H GEF +  M +Q DREY +W G P       D +GDF V Y+RTW +
Sbjct:   23 WVEDVGNESNEMQLGPLPNYNS--EDPNAENYLPPQIVRDQLASGYEFERNDSLSIELNVS-NDQTVDSNQLRNWTTENAWTGRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQECSDDEDA-QKWIEDGKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHRGLEREIDVFEFSTSKKDSGYS-APFSNMYNMNIHKFTTDG----DFSAQRSINMCTNLSQQELIKIGFLWTTTHLHWYINDVEIRKVQHNGEFCDLGMNIQLDREYLSWFGLPNDEQGGTDTFGDFVVHYVRTWNI 324          
BLAST of Ggra8651.t1 vs. uniprot
Match: A0A2V3IBA7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBA7_9FLOR)

HSP 1 Score: 94.7 bits (234), Expect = 1.920e-19
Identity = 61/175 (34.86%), Postives = 87/175 (49.71%), Query Frame = 0
Query:    9 WTDDESLPSSI----PLPRAVSVPNDPNGFNDPPPSYISEQAPSGMEWKKQFGFSSEFNTERSNEVVPMSQLNRWTTDNHWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIG 179
            W +D    S+     PLP   S   DPN  N  PP  + +Q  SG E+++    S E N   +++ V  +QL  WTT+N W GR+PA+F   N   +   +V  V    S     +R   +    A  + + +G   Y  +F RS + + YG+ E   K+GDS LSSAFWLKE G
Sbjct:   23 WVEDVGNESNEMQLGPLPNYNS--EDPNAENYLPPQIVRDQLASGYEFERNDSLSIELNVS-NDQTVDSNQLRNWTTENAWTGRFPAIFFAKNSIVSNNCLVQVVNIADSSDRETIRQECSDDEDA-QKWIEDGKDVYDTTFFRSEQQMMYGYVEIACKLGDSSLSSAFWLKEHG 193          
BLAST of Ggra8651.t1 vs. uniprot
Match: W7QB45 (Glycoside hydrolase n=1 Tax=Catenovulum agarivorans DS-2 TaxID=1328313 RepID=W7QB45_9ALTE)

HSP 1 Score: 92.0 bits (227), Expect = 4.640e-17
Identity = 83/308 (26.95%), Postives = 142/308 (46.10%), Query Frame = 0
Query:   13 ESLPSSIPLPRAVSVPNDPNGF--NDPPPSYISEQAPSGMEWKKQFGFSSEFNTERSNEVVPMS-QLNRWTTDN-HWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGRE--REIDVFEYSSSPNLNGRRRVPLANQFLMNVHSF---ERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFDREYFAWIGD-PRPNDRYGDFEVMYIRTWQ 310
            ESLP+    P ++++P  P GF  N P   +++ Q  S     +Q   + +  T+ ++E    S   NRW  +N +W+GR P  F  +NV+F     + ++ QH +                   ++ EG   YT  F++S+E + YG+FE+  K+ D+   S FWL    G++   EID+ E  + P ++G+R     N    NVH F   E +GN +    + +      +L     V  GL WT E + +Y++  + RE+ +     +  + +  + E   W    P  N    ++ V Y+R WQ
Sbjct:  300 ESLPTISTAPISLTIP--PAGFSANIPDDQFVTRQNNSFPLSDQQNKGNWQLRTDVTDEFDGTSLNTNRWFENNPYWKGRPPTYFDNSNVSFKDGEAIFKINQHGNM------------------KLPEGYT-YTAGFLKSKERVLYGYFESEAKLMDAPWVSGFWLT-FAGKDWWTEIDIAE--NCPCVDGQR-----NTLNSNVHVFRAPEDKGNMKKHFAKPKKYFFPHELQNDYHVW-GLEWTPEVIRFYIDGYMFREIENT--HWHQALAINLNNESNKWFNAMPDDNRLDQEYRVKYVRVWQ 575          
BLAST of Ggra8651.t1 vs. uniprot
Match: R7QRY6 (Glycoside hydrolase closest to bacterial kappa-carrageenases cleavage of beta-1,4 glycosidic linkages in cell wall galactans n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRY6_CHOCR)

HSP 1 Score: 85.9 bits (211), Expect = 4.480e-15
Identity = 66/239 (27.62%), Postives = 103/239 (43.10%), Query Frame = 0
Query:   78 RWTTDN-HWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLK-EIGGREREIDVFEYSSSPNLNGRRRVPLANQFLMNVHSFERRGNNRIDHERSRFVN----VDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFDREYFA-WIGDPRPNDRYGDFEVMYIRTW 309
            +W   N  W+GR P +FA  NV      ++L+ R     +  F             +   +G   YT S+V S+++  YG+FE   K  +S LSS+FW   +   +  EIDVFE        G        +  MN+H F R  N  I+  +++         +   R RF   GL W+K+ + W  N R +R      ++    + ++FD E    W G P        +++ YIRTW
Sbjct:   53 KWYNINPRWKGRQPGLFATKNVKQKRGKLLLKGRYEDENSTAF-------------DGAPDGYETYTTSYVMSKKSARYGYFEVKAKPSNSRLSSSFWGSLDTPTKWTEIDVFELGGGAVHKG---TDFRKRINMNLHVF-RNLNKGIEPGKNQISKPGYYTHSSFLRSRFNVYGLDWSKKWITWTFNGRAIRR--ERNKYWRQAIPMKFDVETMPNWFGLPSEQTLPATYKIKYIRTW 272          
BLAST of Ggra8651.t1 vs. uniprot
Match: A0A3D9L024 (Glycosyl hydrolase family 16 n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L024_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 7.080e-15
Identity = 75/274 (27.37%), Postives = 124/274 (45.26%), Query Frame = 0
Query:   42 ISEQAPSGMEWKKQFGFSSEFNTERSNEVVPMSQLNRWTTDNH-WQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGRE-REIDVFEYSSSPNLNGRRRVPLANQFLMNVHSF---ERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFDREYFAWIGD-PRPNDRYGDFEVMYIRTW 309
            +S+Q  +G +WK +   S EF+++  N         RW  +N  W+GR P  F  +NV+     + +RV QH                    + + EG    TG F++S+ET+ YG+FE   K+ ++   S FW+ ++G     EID+ E  ++P L   R     +    N+H F   E +GN +    R++   V  +L     V  GL W ++ + +YL+  L RE  +     +  + +  + E   W G  P  N   G ++V Y R W
Sbjct:   47 LSDQRNTG-KWKLRKDLSDEFDSKTLN-------TRRWHPNNPGWKGRKPTYFHGSNVSLQDGELQIRVNQHEK------------------DILPEGYTHSTG-FIKSKETVLYGYFEVEAKLMNAPWVSGFWMCKVGKEWWTEIDICE--NAPGLAYNR-----HDLNSNIHVFRAPEDKGNVKEHFSRNKKYYVPFELQADYHVW-GLEWNEDVIRFYLDGVLFREAENT--HWHQPLEINLNCESNKWFGALPDDNRLDGVYKVKYFRAW 283          
BLAST of Ggra8651.t1 vs. uniprot
Match: Q15XQ5 (Glycoside hydrolase, family 16 n=2 Tax=Alteromonadales TaxID=135622 RepID=Q15XQ5_PSEA6)

HSP 1 Score: 72.4 bits (176), Expect = 6.590e-11
Identity = 70/294 (23.81%), Postives = 131/294 (44.56%), Query Frame = 0
Query:   37 PPPSYIS------------EQAP-SGMEWKKQFGFSSEFNTERSNEVVPMSQLNRW-TTDNHWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGRE--REIDVFEYSSSPNLNGRRRVPLANQFLMNVHSF---ERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFD-REYFAWIGDPRPNDRYGDFEVMYIRTWQ 310
            PPP Y +            +Q P S    K ++  +S+F  E   +++      RW  T+  W+GR P  F ++N    G  +V+ + QH                   D  + EG    +G F++++E + YG+FE+  K+ D+   S FWL  +G +E   EID+ E  + P ++G+R     +    N+H F   +  GN +     S+      ++ +   V  GL W ++ + ++++  + RE+ +    +   + V  +  ++F  + D    D   ++ V Y+R WQ
Sbjct:   32 PPPGYTAIIQKSDLVQRQNQQFPLSDQNNKGKWVLNSQFTDEFDGQIL---DTQRWHPTNPGWKGREPTFFHKDNTRLEGGELVMSINQHG------------------DTELPEGYTHSSG-FIKTKERVLYGYFESEAKLMDAPWVSGFWLT-MGTKEWWTEIDIQE--NCPCVDGQR-----HDINSNLHVFRSPKEHGNVKKHFSDSKKYYHPDEIQKDYHVW-GLEWNEDVIRFFIDGFMFREVENTHWHQPLTINVNNESNKWFNALPDDNRTDE--EYRVKYVRVWQ 292          
BLAST of Ggra8651.t1 vs. uniprot
Match: K6WD37 (GH16 domain-containing protein n=5 Tax=Alteromonadaceae TaxID=72275 RepID=K6WD37_9ALTE)

HSP 1 Score: 69.3 bits (168), Expect = 7.350e-10
Identity = 65/275 (23.64%), Postives = 123/275 (44.73%), Query Frame = 0
Query:   42 ISEQAPSGMEWKKQFGFSSEFNTERSNEVVPMSQLNRWTTDN-HWQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGRE--REIDVFEYSSSPNLNGRRRVPLANQFLMNVHSFE--RRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELNHAGEFRNAKMRVQFD-REYFAWIGDPRPNDRYGDFEVMYIRTWQ 310
            +S+Q+ SG +W     F+ EF+ +  +         RW   N  W+GR P  F ++N       +V+ + QH                   D ++ +G    +G F++++E I YG+FE+  K+ D+   S FWL  +G ++   EID+ E  + P + G+R     +    N+H F   +   N   H          D  ++ +   GL W K+ + ++++  + RE+ +    +   + V  +  ++F  + D    D+  ++ V Y+R WQ
Sbjct:   51 LSDQSNSG-KWTLNAQFTDEFDGQTLD-------TKRWHPSNPSWKGREPTFFHKDNARLEEGELVMSINQHG------------------DTKLPKGYTHSSG-FIKTKERILYGYFESEAKLMDAPWVSGFWLT-MGTKDWWTEIDIQE--NCPCVEGQR-----HDINSNLHVFRSPKEHGNVKKHFSDPKKYYHPDEIQKGYHVWGLEWNKDVIRFFIDGFMFREVENTHWHQPLTINVNNESNKWFKALPDDSRTDQ--EYRVKYVRVWQ 288          
BLAST of Ggra8651.t1 vs. uniprot
Match: A0A382HJC0 (GH16 domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A382HJC0_9ZZZZ)

HSP 1 Score: 66.6 bits (161), Expect = 7.920e-9
Identity = 57/231 (24.68%), Postives = 100/231 (43.29%), Query Frame = 0
Query:   85 WQGRYPAVFAENNVTFNGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSRETITYGFFETVVKMGDSGLSSAFWLKEIGGREREIDVFEYSSSPNLNGRRRVPLANQFL-MNVHSFERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWTKEKVCWYLNDRLVRELN--HAGEFRNAK-MRVQFDREYFAWIGDPRPNDRYGDFEVMYIRTWQL 311
            W GR P  F + +       + L ++ +  P +             IDE        YT S + S+    YG+FE   +  +  +SSAFWL    G   E+D+FE             P A   +   +H+++    +  D+   +  +++ ++S   F   G   + E + +Y +   V  +N   +G+  N   M +  D E F+W G P+ N+   +F++ YIR+WQL
Sbjct:  100 WVGRAPGAFDKKSPFIENGILNLPIKWN--PNSDLFPYLDENREELIDEDCMCKYGKYTTSGLISKSNAQYGYFEIKARAANIPISSAFWLI---GNHFEVDIFELIGKTGNGIDGSGPEAPYTMPATIHNWDE--GDLEDNGYGKSFSLNWNVSED-FHIYGAEISSEYINFYADGSKVGSINKKESGKIWNTDFMHIWVDTEIFSWEGFPKKNELPANFQIDYIRSWQL 322          
The following BLAST results are available for this feature:
BLAST of Ggra8651.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IL691.310e-6037.94Beta-porphyranase A n=2 Tax=Gracilariopsis chorda ... [more]
A0A2V3IBA71.920e-1934.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
W7QB454.640e-1726.95Glycoside hydrolase n=1 Tax=Catenovulum agarivoran... [more]
R7QRY64.480e-1527.62Glycoside hydrolase closest to bacterial kappa-car... [more]
A0A3D9L0247.080e-1527.37Glycosyl hydrolase family 16 n=1 Tax=Marinoscillum... [more]
Q15XQ56.590e-1123.81Glycoside hydrolase, family 16 n=2 Tax=Alteromonad... [more]
K6WD377.350e-1023.64GH16 domain-containing protein n=5 Tax=Alteromonad... [more]
A0A382HJC07.920e-924.68GH16 domain-containing protein n=3 Tax=root TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 89..305
e-value: 3.8E-13
score: 49.3
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 31..311
score: 14.191973
NoneNo IPR availableGENE3D2.60.120.200coord: 39..311
e-value: 1.3E-39
score: 138.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 42..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:291269..292204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8651.t1Ggra8651.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 291269..292204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8651.t1 ID=Ggra8651.t1|Name=Ggra8651.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=312bp
MRRSFPPKWTDDESLPSSIPLPRAVSVPNDPNGFNDPPPSYISEQAPSGM
EWKKQFGFSSEFNTERSNEVVPMSQLNRWTTDNHWQGRYPAVFAENNVTF
NGKSMVLRVRQHRSPTAGFLRAFQNGHRRAIDERMREGLPFYTGSFVRSR
ETITYGFFETVVKMGDSGLSSAFWLKEIGGREREIDVFEYSSSPNLNGRR
RVPLANQFLMNVHSFERRGNNRIDHERSRFVNVDADLSRQRFVKIGLLWT
KEKVCWYLNDRLVRELNHAGEFRNAKMRVQFDREYFAWIGDPRPNDRYGD
FEVMYIRTWQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf