Ggra8650.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8650.t1
Unique NameGgra8650.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Homology
The following BLAST results are available for this feature:
BLAST of Ggra8650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01411GCC2_GCC3_2coord: 41..86
e-value: 8.0E-6
score: 35.4
coord: 104..148
e-value: 4.8E-5
score: 32.8
coord: 265..307
e-value: 2.6
score: 13.2
coord: 216..259
e-value: 0.038
score: 23.1
coord: 151..213
e-value: 7.0
score: 9.4
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 43..97
e-value: 5.5E-9
score: 37.9
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 101..157
e-value: 4.8E-10
score: 41.3
NoneNo IPR availableGENE3D2.10.220.10coord: 182..312
e-value: 8.8E-7
score: 30.6
NoneNo IPR availablePANTHERPTHR46967INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINALcoord: 32..140
coord: 192..308
coord: 112..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..361
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 48..75
e-value: 2.9E-6
score: 26.9
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 194..297
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 22..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:289895..290980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8650.t1Ggra8650.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 289895..290980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8650.t1 ID=Ggra8650.t1|Name=Ggra8650.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MSVAGISLILVLFFCSAFASFPCEPGYGGDYEGGCVICQPGSYDGEYGFC
DNCQPGTYQAEAGQTECKPCPTNAHSLYGATECVVCEEGQALMQSNTCGT
CPPGQYYLEGYCNSCESGFFKPGEGLSPCMPCPRNSYSRHESSECIACPE
GKALMDDGSCAICPPGKFYDTFSFECTDCYTMQYTDSPNIFPSCYQCGGN
SFAPRGSTKCIECPVGKVFIKSSSTCEACPPGQFYDQYELSCSDCPYNQF
TLYESEKYCRYCMTGTFARKGSTTCFACPPGQYYLADTDECGECPRGEYY
ESYEARCNGGSYGPTETPFPEPLEEINESAEPTWDLPPVPTYDELGGQKL
PVADEFVYPEM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf