Ggra8648.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8648.t1
Unique NameGgra8648.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length286
Homology
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BLAST of Ggra8648.t1 vs. uniprot
Match: A0A2V3IF96 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF96_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 2.930e-32
Identity = 74/205 (36.10%), Postives = 114/205 (55.61%), Query Frame = 0 
Query:   65 IIAPSSYQAANISRSRLAYNPTPAVATVVNLPRSRSVNISVTLSGSVDLEGVLASHIETEIEKIVANSSWRIKDFFNKEKEALQERAGDRYFFFFQAAANFGYSDNRETREMMQTVEFEHFTNQSALMLDSCNQHDLKGSYSVRLEIASIGRPRRLSLKPYLYFPQVTLTSGKIMKVVANSSRLGIADQYGNIFDDIHH-VELSN 268
            ++AP++ Q A I RSRL Y  T   A+   +P  R +  S +L G+V + G LAS IE   E+I      R+++F+  EK  LQ RAGD YF FFQAA +FG+++++ TR+ + + ++  F+ +  + L S     L   YSV     S G  R +    Y+   Q+TL+SG+I+ +V  +  L + DQ  N+ D I + VE  N
Sbjct:   62 MLAPTTAQVAGIERSRLGYIQTSRAASGF-IPPGRGITFSASLEGNVSMTGSLASDIEDATERIALGEPDRVREFYRTEKRNLQSRAGDNYFHFFQAARDFGFTEDQTTRDTLNSTDYAQFSEKVGVELGSSFLGSLNSRYSVTYSGVSDGNQRVIQAFAYVLINQITLSSGRILNIVQKNPELVVTDQEFNVIDRIENSVEFEN 265
The following BLAST results are available for this feature:
BLAST of Ggra8648.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IF962.930e-3236.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..62
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..285
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:270536..271393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8648.t1Ggra8648.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 270536..271393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8648.t1 ID=Ggra8648.t1|Name=Ggra8648.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=286bp
MVNKVSRFLVILAVLCFISSAIAAPPLSVSDLMEFLEGSQDLEPTPEEPD
STPTVEPPTSDPNSIIAPSSYQAANISRSRLAYNPTPAVATVVNLPRSRS
VNISVTLSGSVDLEGVLASHIETEIEKIVANSSWRIKDFFNKEKEALQER
AGDRYFFFFQAAANFGYSDNRETREMMQTVEFEHFTNQSALMLDSCNQHD
LKGSYSVRLEIASIGRPRRLSLKPYLYFPQVTLTSGKIMKVVANSSRLGI
ADQYGNIFDDIHHVELSNADKLGSNGACANSLDSI*
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