Ggra8646.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8646.t1
Unique NameGgra8646.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3ISS0 (Peptidase M20 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISS0_9FLOR)

HSP 1 Score: 225 bits (573), Expect = 1.960e-67
Identity = 115/169 (68.05%), Postives = 133/169 (78.70%), Query Frame = 0
Query:   72 VVTLTQQEVNIPSPSGFEQRAFQHAKSWFVVRGWKVVTHPVPPLFTLLATIASDSSVRALLSTHLEVVPGAAHSCLAHGRLYGRGAVDAKRQAASLMLASASLRDERVALLLVPGEETDHDGMAAAQAFGVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHSG 240
            V+TLT+Q VNIPSPSG EQR   HA+SWFV +GW V THPVPP F LLAT+AS S VR LLSTHL+VVPG   S + HGRLYGRGAVDAK QAA+LML +A L D RVA+LLVP EETDH GMA+A AFG+  NITL+N EPTE+KLV +QKG+LK   +A   +AHSG
Sbjct:   50 VLTLTKQMVNIPSPSGSEQRVLNHARSWFVSQGWNVATHPVPPSFALLATLASPSHVRVLLSTHLDVVPGPPLSRVEHGRLYGRGAVDAKGQAAALMLTAARLADPRVAVLLVPREETDHAGMASAHAFGLSSNITLLNAEPTESKLVHRQKGLLKAWIRARGEAAHSG 218          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3J5P4 (STAG domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P4_9FLOR)

HSP 1 Score: 113 bits (282), Expect = 4.700e-27
Identity = 54/82 (65.85%), Postives = 69/82 (84.15%), Query Frame = 0
Query:  244 APGLVSAWMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIKEMCQKIAVDAPERVVVLDTKTKSRR 325
            +PGLV+AWM+HVSINGPEA+AA+V L   A RP+PF+ EQLVT + IIAN+PQES++++CQ +AVDAPE+VVVL   T SRR
Sbjct:   12 SPGLVTAWMSHVSINGPEAMAAIVSLFISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKNTPSRR 93          
BLAST of Ggra8646.t1 vs. uniprot
Match: R7Q8T6 (M20_dimer domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8T6_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 1.470e-26
Identity = 74/179 (41.34%), Postives = 101/179 (56.42%), Query Frame = 0
Query:   75 LTQQEVNIPSPSGFEQRAFQHAKSWFVVRGWKVVTHPV-------PPLFTLLATIASD--SSVRALLSTHLEVVPGAAHSCLAHGR----LYGRGAVDAKRQAASLMLASASLRDERVALLLVPGEETDHDGMAAAQAFGVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHSG 240
            LT    N+ S S  E  AF++A +W +   + V   P+       P    LLA   +   + ++ LL THL++VPG+        R    L GRG VDA+ QAA +ML+   LRD RV LLLV GEETDH GM AA   G   ++ L+N EPTE++L   QKGM K++ +A+  +AHSG
Sbjct:   60 LTHALTNMRSSSNSEPLAFEYAAAWLIRHSFSVKRQPLSKPSKNGPRRENLLAMWRNSDPAKLQVLLCTHLDLVPGSGRPIGTPSRDGDRLRGRGTVDARGQAAGMMLSLKELRDSRVGLLLVSGEETDHAGMLAAADLGFGSHLILVNGEPTESQLGTVQKGMAKILIRASGKAAHSG 238          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3IQR7 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR7_9FLOR)

HSP 1 Score: 115 bits (288), Expect = 8.690e-26
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0
Query:  241 PTRAPGLVSAWMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIKEMCQKIAVDAPERVVVLDTKTKSRR 325
            P+ +PGLV+AWM+HVSINGPEA+AA++ LV  A RP+PF+ EQLVT + IIANDPQES++++CQ +AVD PE+VVVL   T SRR
Sbjct:    5 PSSSPGLVTAWMSHVSINGPEAMAAIMSLVISAARPVPFSREQLVTLDMIIANDPQESVRDLCQVLAVDEPEKVVVLAKNTPSRR 89          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3IGA3 (Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGA3_9FLOR)

HSP 1 Score: 115 bits (288), Expect = 1.120e-24
Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 0
Query:  211 EEPTEAKLVEKQKGMLKVMHKANSVSAHSGPTRAPGLVSAWMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIKEMCQKIAVDAPERVVVLDTKTKSRR 325
            E+P +   V+       ++HK         P+ +PGLV+AWM+HVSINGPEA+AA+V LV  A RP+PF+ EQLVT + IIAN+PQE ++++CQ +AVDAPE+VVVL   T SRR
Sbjct:  115 EQPNQDSSVQSPLLFDTMLHK---------PSSSPGLVTAWMSHVSINGPEAMAAIVSLVISAARPVPFSREQLVTSDMIIANEPQEIVRDLCQVLAVDAPEKVVVLAKDTPSRR 220          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3IQS1 (Sister-chromatid cohesion protein 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS1_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 1.190e-23
Identity = 49/85 (57.65%), Postives = 68/85 (80.00%), Query Frame = 0
Query:  241 PTRAPGLVSAWMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIKEMCQKIAVDAPERVVVLDTKTKSRR 325
            P+ +PG V+AWM+H SINGPEA+ A++ L   A RP+ F+ EQLVT + IIAN+PQES++++CQ +AVDAPE+VV+L+  T SRR
Sbjct:    2 PSSSPGFVTAWMSHGSINGPEAMTAILFLAISAARPVTFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVMLEKNTPSRR 86          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A2V3IFY1 (Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFY1_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 5.460e-23
Identity = 52/85 (61.18%), Postives = 68/85 (80.00%), Query Frame = 0
Query:  241 PTRAPGLVSAWMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIKEMCQKIAVDAPERVVVLDTKTKSRR 325
            P+  PGL +A M+HVSING EA++A+V LV  A RP+PF+ EQLVT + IIAN+PQES++++CQ +AVDAPE+VVVL   T SRR
Sbjct:    5 PSSPPGLFTACMSHVSINGLEAMSAIVFLVISAARPVPFSREQLVTSDMIIANEPQESVRDLCQVLAVDAPEKVVVLAKDTPSRR 89          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A6J4MD97 (Acetylornithine deacetylase n=1 Tax=uncultured Gemmatimonadaceae bacterium TaxID=246130 RepID=A0A6J4MD97_9BACT)

HSP 1 Score: 100 bits (250), Expect = 1.080e-20
Identity = 71/171 (41.52%), Postives = 88/171 (51.46%), Query Frame = 0
Query:   72 VVTLTQQEVNIPSPSGFEQRAFQHAKSWFVVRGWKVVTHPVPPLFTLLATIASDSSVRALLSTHLEVVPGAAHSCLAHGRLYGRGAVDAKRQAASLMLASASL---RDERVALLLVPGEETDHDGMAAAQAFGVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHS 239
            VV L  + ++I SPSG E  A      W V RGW V    V P        AS       LSTHL+ VP      L  GRLYGRGA DAK  AA+++ A+  L    +ERV LLL+ GEE + DG  AA     P +  L+N EPTE++L    KG L+V  +     AHS
Sbjct:    4 VVALAAELLSIASPSGAEGPAVDFVSRWLVARGWNVTVQEVAPGRG--NVWASRRGGGVTLSTHLDTVPPYVKPELRDGRLYGRGACDAKGIAAAMLAAADGLVREGEERVDLLLLVGEEKNSDGARAANNLA-PTSRFLVNGEPTESRLASGAKGSLRVTLRTRGREAHS 171          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A0L0FTB9 (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FTB9_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 3.790e-19
Identity = 66/178 (37.08%), Postives = 91/178 (51.12%), Query Frame = 0
Query:   72 VVTLTQQEVNIPSPSGFEQRAFQHAKSWFVVRGWKVVTHPVPPLFTLLATI------ASDSSVRALLSTHLEVVPGAAHSCLAHGRLYGRGAVDAKRQAASLMLASASLRDER---VALLLVPGEETDHDGMAAAQAFGVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHSG 240
            VV L +  V+I S SG EQ       SW V RGW V    V   + L           + +  +  ++THL+VVP    S +    LYGRGA D K   A++++A+ +L +     V LL V  EET H+GM  A   G+     ++ E PT+AK+V  QKG+LK    A  V+AHSG
Sbjct:  495 VVALARSLVDINSTSGSEQHMAAAVTSWLVARGWNVAQQAVGSRYNLHCVRNHANGEVNSAPPKVYMNTHLDVVPPWFPSTVDDTNLYGRGACDTKSLIAAMLIAAQTLTETNRSAVGLLFVVSEETTHEGMIKANELGINPQYLIVGE-PTDAKVVLLQKGILKCTLTAKGVAAHSG 671          
BLAST of Ggra8646.t1 vs. uniprot
Match: A0A8J7U6M1 (M20/M25/M40 family metallo-hydrolase n=1 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7U6M1_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 9.670e-19
Identity = 62/173 (35.84%), Postives = 93/173 (53.76%), Query Frame = 0
Query:   72 VVTLTQQEVNIPSPSGFEQRAFQHAKSWFVVRGWKVVTHPVPPLFTLLATIASDSSVRALLSTHLEVVPGAAHSCLAHGRLYGRGAVDAKRQAASLMLASASL----RDERVALLLVPGEETDHDGMAAAQAFGVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHSG 240
            VV L  + +N  S SG E+   +  + +   RGW+V    V P    +    +    R + ++H++ VP    + + +G LYGRGA D K   A+ +LA+  L    RD+ +ALL V GEE DH GM  A   G+  +  ++ E PTE+KLV +QKG+LK+       +AHSG
Sbjct:    5 VVALAMEMINTESISGNEEPMARFLRDYLEPRGWQVTFQEVAPGRPNVLARRNAKQPRLVFNSHIDTVPPFFPATIENGTLYGRGACDTKSLIAAQLLAAQELVEAGRDD-IALLYVVGEEVDHIGMIHANELGLKPDYLIVGE-PTESKLVTRQKGILKLALTCKGKAAHSG 175          
The following BLAST results are available for this feature:
BLAST of Ggra8646.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISS01.960e-6768.05Peptidase M20 domain-containing protein n=1 Tax=Gr... [more]
A0A2V3J5P44.700e-2765.85STAG domain-containing protein n=2 Tax=Gracilariop... [more]
R7Q8T61.470e-2641.34M20_dimer domain-containing protein n=1 Tax=Chondr... [more]
A0A2V3IQR78.690e-2664.71Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IGA31.120e-2452.17Cohesin subunit SA-1 n=1 Tax=Gracilariopsis chorda... [more]
A0A2V3IQS11.190e-2357.65Sister-chromatid cohesion protein 3 n=1 Tax=Gracil... [more]
A0A2V3IFY15.460e-2361.18Cohesin subunit SA-3 n=1 Tax=Gracilariopsis chorda... [more]
A0A6J4MD971.080e-2041.52Acetylornithine deacetylase n=1 Tax=uncultured Gem... [more]
A0A0L0FTB93.790e-1937.08Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A8J7U6M19.670e-1935.84M20/M25/M40 family metallo-hydrolase n=1 Tax=Acant... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 329..331
NoneNo IPR availableGENE3D3.40.630.10Zn peptidasescoord: 71..269
e-value: 7.9E-21
score: 76.9
NoneNo IPR availablePANTHERPTHR43808ACETYLORNITHINE DEACETYLASEcoord: 65..240
NoneNo IPR availablePANTHERPTHR43808:SF8PEPTIDASE M20 DOMAIN-CONTAINING PROTEIN C757.05Ccoord: 65..240
NoneNo IPR availableSUPERFAMILY53187Zn-dependent exopeptidasescoord: 71..231
IPR002933Peptidase M20PFAMPF01546Peptidase_M20coord: 131..199
e-value: 6.0E-8
score: 32.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000855_piloncontigtig00000855_pilon:224714..229883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8646.t1Ggra8646.t1Gracilaria gracilis GNS1m malemRNAtig00000855_pilon 224714..229883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8646.t1 ID=Ggra8646.t1|Name=Ggra8646.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MDAAGGMRQRIVAGPDYNMAQLGEAVGEPRDTALDVKHLDLEHASSSWMR
SNYFSHAAEIELGNNPNSDHHVVTLTQQEVNIPSPSGFEQRAFQHAKSWF
VVRGWKVVTHPVPPLFTLLATIASDSSVRALLSTHLEVVPGAAHSCLAHG
RLYGRGAVDAKRQAASLMLASASLRDERVALLLVPGEETDHDGMAAAQAF
GVPRNITLMNEEPTEAKLVEKQKGMLKVMHKANSVSAHSGPTRAPGLVSA
WMNHVSINGPEAIAALVLLVNCAVRPIPFAHEQLVTPETIIANDPQESIK
EMCQKIAVDAPERVVVLDTKTKSRRFDSERK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002933Peptidase_M20