Ggra8642.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IFK7 (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 413 bits (1061), Expect = 1.440e-136 Identity = 209/329 (63.53%), Postives = 256/329 (77.81%), Query Frame = 0
Query: 297 ICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGTKYSAYGFSSSANLIQGSTTQLESVFIPAVNLTARVTGGTVIYDGLDACFREVNGSSGNRVIVIVTDGQDGGFLSALDLAPSVKAEGIAIVTVGVGDGVDEEYLRSLATTPNFFIGSSFDTLPSDVVRVAESSCDVVEVSPGPVFITPAPEPFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVENVVVGR 625
+C+ +D+SGSI EY+VEQQFVI+VSR ++ RTNGT YSAYGF+SSA++IQ ST+ LE F+P +N + + G T +Y GL+ACF EVNG++GNRVIV++TDG D G A LAP+VKA G+AIVT+GVG GVDE+YLRSLATTP FFI S+F +LP+DVVRVAESSCDVVEVSP P ITP P P DPCEEAYD C+F F+N VP F+VD PDV FTP +VSRN E +G+LNTN+++VE IEDDG+VT ITS PA Q+FS TQFKP T+ TS SGI HESFQ+DQ + RDRCVRVF S FQLL+++ P NV+ N V R
Sbjct: 42 VCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVPD-ITPTPIP--DPCEEAYDTCDFAFMNELSVPTFAVDVAPDVPFTPKIVSRNPLELVGVLNTNDIVVEFIEDDGTVTPITSEPAIQSFSATQFKPITLTGTSRSGIAHESFQADQLSLARDRCVRVFVSSFQLLDVTPPNNVIGNPAVTR 367
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3J5W6 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 258 bits (659), Expect = 8.220e-75 Identity = 166/496 (33.47%), Postives = 230/496 (46.37%), Query Frame = 0
Query: 279 EEDSGTNAKPLEIPPEPPICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGTKYSAYGFSSSANLIQGSTTQLESVFIPAVNLTARVTGGTVIYDGLDACFREVNGSSGNRVIVIVTDGQDGGFLSALDLAPSVKAEGIAIVTVGVGDGVDEEYLRSLATTPNFFIGSSFDTLPSDVVRVAESSCDVVEVSPGPV---------FITPAPE--------------------------------------------------------------------------------------------------------------------------------------------PFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVENVVVGR 625
++DS P++ +C+AMDQSGSI + Y Q FVI V+RE+ R+ GT +SAYGFS+S IQ ST+QLE++F+PAV + +G T +Y GL+ CF ++ GN+VI+++TDGQD F A LAP +K GI IVTVG+G GV YL LA+TP+FFI F TLPS+VV +++ +CD V+ SP P F+T P P +D CE+AY C+F F + VP F++ G PD FTP +VSR +G+LNTN ++ E IE DGSV ITS PA F+PTQFKP +I + SG+G+++FQ +Q R+RCVR+FF+ FQLLE + P++V+ N+ R
Sbjct: 25 QDDSSEETCPIDS-----VCFAMDQSGSIFLN-YGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQLMFSTLPSEVVSLSQMTCDAVDASPEPSETPEETMEPFVTETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFXXXXXXXXXXXXXXLVSESPEPSMTXXXXXXXXXXXXXXXXXXXXXXXXXVIESPIXXXXXXXXXXXVPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADR 514
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IGK2 (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 214 bits (546), Expect = 2.290e-60 Identity = 124/318 (38.99%), Postives = 188/318 (59.12%), Query Frame = 0
Query: 297 ICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGTKY-SAYGFSSSANLIQGSTTQLESVFIPAVNLTARVTGGTVIYDGLDACFREVNGSSGNRVIVIVTDGQDGGFL-----SALDLAPSVKAEGIAIVTVGVGDGVDEEYLRSLATTPNFFIGSSFDTLPSDVVRVAESSC-DVVEVSPGPVFITPAPEPFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQ 607
+CY +DQS S++ +Y E+ FVI ++R++ ++ + SA FS+ A +IQ T L F+ AVN + GT L C + + G++ IV++TDG GF +A +A +K EG IVTVGVG +DE +LR +A+ P+ F+G+SFD L +++V C D++E C +A+D CEF F + FS+ G PD +FTP +VS++AS RLG+LN+N ++ E IED+G V IT+ +Q+ F+PT FKP+T+ N SGIGH++F +QK V +DRC+RV+F+ FQ
Sbjct: 33 VCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLNK-FVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDG---GFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIAS-PDLFVGTSFDNLDEVIMQVVSDICVDIIETD----------------CSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNG-VFPITNFGSQR-FTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQ 327
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IP66 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 214 bits (545), Expect = 1.100e-57 Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 0
Query: 451 FDTLPSDVVRVAESSCDVVEVSPGPVFITPAPEPFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVENVVVGRK 626
F P+ V + SC + +PGPV TP PEP VD C++AYD+C F F N DVP FSVDGP +VAF+P++ SRN +E LG+LN+N + VEI E DG+ ITSLPA Q FS TQFKPF++ NT SGIGHE+FQ+DQ++V+R RCVRVFFS FQLLEL+ P+NVV NVV GR+
Sbjct: 419 FYIYPTPFVEYLQRSC--LGGTPGPVLPTPTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGRE 592
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3ISB7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB7_9FLOR) HSP 1 Score: 170 bits (430), Expect = 1.130e-44 Identity = 90/192 (46.88%), Postives = 121/192 (63.02%), Query Frame = 0
Query: 143 LSMCHINSYCERGETCVFLDGLSGSWCKASALVEERNASATATKLGLERCEHTWECVTPRRCARFYEGGLFDECNGHADCFCLDTEYRCFRDDECDADEQCEPFEEVSVCVARNMVASGSIPIREMLEASAEGEEEE-EDSGTNAKPLEIPPEPPICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGT 333
+ MCH+NS+CE GETCVF +GLS + CKA+ LVE+R+ + KL L+ C +T EC PRRCARF E GLFDEC+ +DCFCLDTEY+CFRDDEC +E C+ F + C A ++V + SIP +E + +GEE EDS + P+E+PPEP I + G++ D V + EL T+ T
Sbjct: 1 MPMCHVNSFCEPGETCVFHEGLSSAVCKAAKLVEQRDPAHPGIKLSLQGCSYTRECRAPRRCARFAETGLFDECHERSDCFCLDTEYQCFRDDECLENESCQRFANSAACAAHSIVVANSIPQKET--ENEKGEEPAFEDSDDSLVPIELPPEPTIGVS---EGAVRADACVAVKHLQELERNELLFATHRT 187
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IQ26 (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR) HSP 1 Score: 114 bits (284), Expect = 1.150e-23 Identity = 57/175 (32.57%), Postives = 102/175 (58.29%), Query Frame = 0
Query: 297 ICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGTKYSAYGFSSSANLIQGSTTQLESVFIPAVNLTARVTGGTVIYDGLDACFREVNGSSGNRVIVIVTDGQDGGFLSALDLAPSVKAEGIAIVTVGVGDGVDEEYLRSLATTPNFFIG-SSFDTLPSDVVRVAESSCDVVE 470
+C+A+D+SGSIS +++ + + ++A+++EL+ G+ SA GFSS A LIQ TT + F+ A+ +++ G T L C ++ ++ R+IV++TDG D +A +K GI I+T+G+G G++ LRS+A++P+ FI F + + + ++ C V E
Sbjct: 79 VCFAIDESGSISPTDFIEQTEAIVAIAQELSTFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAADPRIIVLLTDGADNTMPFGTSVAGGIKNNGIIIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPVPE 253
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3J0X3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0X3_9FLOR) HSP 1 Score: 97.1 bits (240), Expect = 1.170e-19 Identity = 55/168 (32.74%), Postives = 87/168 (51.79%), Query Frame = 0
Query: 458 VVRVAESSCDVVEVSPGPVFITPAPEPFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVENVVVGR 625
++R + V+ + G PA PF C EAY C++ F N+ +P +++ P D AFTP++VS+N S +L ++N+N E + +G + + + F + FKPF N S + HE + +Q+ V RC+RV+FS +Q L VENV V R
Sbjct: 1 MIRCLPVALAVLMLMSGVAAQGPALTPFYPACVEAYSKCDWTFYNVSSLPTYNISAPADTAFTPLIVSKNKSVKLTVVNSNNAFTEFVYKEGLLPSVYE--GKPRFRISTFKPFQGIN--GSRLAHERYTGNQERVASGRCLRVYFSSYQQLVTGR----VENVRVAR 160
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IT54 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT54_9FLOR) HSP 1 Score: 95.9 bits (237), Expect = 2.170e-19 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 0
Query: 489 CEEAYDICEFGFV-NMDDVPAFSVDGPPDVAFTPIVVSRNASERLGILNTNEMMVEIIED-DGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVEN 620
C+ ++ C+F F + + +P +++ GP D+ FTP +VS E LG+LN NE+ + D D S E ++ F+ TQFKP + +SGI HE FQ + D R RCVR++F+ FQ+L + V+ N
Sbjct: 24 CDGFFNSCQFSFEGHSESIPTYNIGGPSDIPFTPRIVSNRPGEILGVLNVNEIDAIFVNDPDFSTLE------EEGFARTQFKPMPFPDGFSSGIAHEHFQPGKLDEARGRCVRIYFTSFQILSNDSQPVVINN 151
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A7S1XGG3 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGG3_9RHOD) HSP 1 Score: 90.1 bits (222), Expect = 9.660e-16 Identity = 88/337 (26.11%), Postives = 154/337 (45.70%), Query Frame = 0
Query: 297 ICYAMDQSGSISGDEYVVEQQFVIAVSRELNGRTNGT----KYSAYGFSSSANLIQGSTTQLESVFIPAVN-LTARVTGGTVIYDGLDACFREVNGSSGNRVIVIVTDGQDGGFLSALDLAPSVKAE-GIAIVTVGVGDGVD-EEYLRSLATTPNFFI-GSSFDTLPSDVVRVAESSCDVVEVSPGPVFITPAPEPFVDPCEEAYDICEFGFVNMDDVPAFSVDGPPDVAFTP--IVVSRNASERLGILN-TNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPF-TIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLELSAPYNVVENV 621
IC+A+D+SGS+S ++ E+ V+ V+ + ++ A F + + TT L S F VN ++R G T L AC ++G +G RVIV++TDG +A A ++K+ +VTVGV + L+ LA+ P +F+ +SF L + + C P PV C + + C F + TP I+V + S +G++ + E V + +++ + Q FS + FK + T+Y + SG+G+E+ Q +Q + + CVR+ F+ +Q+L+ + NV+ N+
Sbjct: 49 ICFAIDESGSVSQADFDKEKSAVVDVATRIQSIDTALGISPRFGAIAFDGNVQPVSPLTTSL-SAFTTTVNGFSSRFGGDTRYAPALQACQSLLSGQTGVRVIVLLTDGAPSDATAATTAANAIKSTPNTFLVTVGVNLAASGKTLLQGLASGPEYFVDATSFVDLQQKTGDIVAAMC------PPPV------------CPKT-NFCRF-------------------SLTPGGIIVRKGGSFIVGVVGGSREASVRVGSSYIPISQWSPPGLAQHFSSSFFKTYSTVYPSMRSGVGYETAQQNQGNFLDMACVRLPFAAYQILDTNG--NVISNI 344
BLAST of Ggra8642.t1 vs. uniprot
Match: A0A2V3IEB5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEB5_9FLOR) HSP 1 Score: 83.2 bits (204), Expect = 7.090e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query: 487 DPCEEAYDICEFGFVNMDDVPAFSVDGPPD-VAFTPIVVSRNASERLGILNTNEMMVEIIEDDGSVTEITSLPAQQAFSPTQFKPFTIYNTSASGIGHESFQSDQKDVVRDRCVRVFFSQFQLLE 610
D C +D C F + F + D VAFTP +V E++GI+N+N ++ + IE S T++ A +PTQFKPFTI NT+ SG+GHE+FQ V + RCVRV+F+ Q+L+
Sbjct: 25 DFCVSFFDDCVLRFAGQAALATFPLAATVDNVAFTPAIVFPG--EQIGIVNSNGVIPQFIESKPSGITATNVTAF-GLTPTQFKPFTIVNTTTSGVGHETFQG-AVSVAQRRCVRVYFTSGQILQ 145 The following BLAST results are available for this feature:
BLAST of Ggra8642.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8642.t1 ID=Ggra8642.t1|Name=Ggra8642.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=637bpback to top |