Ggra8633.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8633.t1
Unique NameGgra8633.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Homology
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A2V3INM9 (GTP 3',8-cyclase, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM9_9FLOR)

HSP 1 Score: 316 bits (809), Expect = 7.640e-106
Identity = 151/223 (67.71%), Postives = 179/223 (80.27%), Query Frame = 0
Query:    1 MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            + AG+S +NLSLDSLCPHTF+LLTRRP   H RVLSAL+DA+ +P L+VKLNVVVMSP N  +LP F  LTE   L VRFIEYMPF GN+W+HASFVPYS ML+++  HYG L    TH  DT+KY+R+PGF G +GFISSMS  FCAGCNR+R+TADGALKTCLFGE E+SLRD+MR GA+D+Q+LE +R AL  K+FALGGK DM  +A  DNRSMVRIGG
Sbjct:   78 LRAGVSGINLSLDSLCPHTFSLLTRRPPQVHERVLSALHDAVTEPSLSVKLNVVVMSPHNHLTLPDFVRLTESHPLSVRFIEYMPFAGNRWKHASFVPYSEMLRSITHHYGPLSAVATHPNDTAKYFRVPGFQGTIGFISSMSAPFCAGCNRIRVTADGALKTCLFGEHEVSLRDIMRQGASDEQVLETIRRALHDKHFALGGKGDMFGIAAGDNRSMVRIGG 300          
BLAST of Ggra8633.t1 vs. uniprot
Match: R7QKM4 (Radical SAM core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKM4_CHOCR)

HSP 1 Score: 261 bits (667), Expect = 2.790e-84
Identity = 132/222 (59.46%), Postives = 159/222 (71.62%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            AAGLS VN+SLD+L    F  + RR    HARVL+A+  A +    AVK+NVVVM  +ND  LP FAALTEH  +DVRFIEYMPFDGN+W     VPY+ ML ++AR YGRL+       DTSK+YR+PGF GRVGFI+SMSDHFC  CNR+R+TADG LK CLFG +E+SLRD MR+G  DD L E +  AL  K++ LGG +DMH LA   NRSM+RIGG
Sbjct:   82 AAGLSGVNISLDTLHAAKFERIARRKG--HARVLAAIQTAAEAGLDAVKVNVVVMKGVNDDELPAFAALTEHMRVDVRFIEYMPFDGNRWSADKLVPYADMLDSVARAYGRLERASDSPNDTSKHYRVPGFLGRVGFITSMSDHFCGTCNRIRVTADGNLKVCLFGREEVSLRDAMREGMADDDLSELIDRALMRKHWMLGGNKDMHVLAKQPNRSMIRIGG 301          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A1X6P1P3 (Radical SAM core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1P3_PORUM)

HSP 1 Score: 236 bits (601), Expect = 2.740e-74
Identity = 122/222 (54.95%), Postives = 155/222 (69.82%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            AAGL+A+N+SLD+L P  F L+TRR      RVL A++ AL     +VKLN VVM  +N+  +  F  LTE + LDVRFIEYMPF GN W  A FV Y+ ML  +    G L+       DT K+YR+PG AGRVGFI+SM++HFC GCNRLR+TADG+LK CLFG  E+SLRD +R GATD +LL  VR A++ K+++LGGK+D H LA +DNR M+ IGG
Sbjct:   82 AAGLTALNVSLDTLVPARFELITRRRG--QGRVLDAIDAALAAGFPSVKLNCVVMRGVNEDEVVDFVRLTETRRLDVRFIEYMPFGGNAWSDARFVSYAEMLGAIGAGVGALERVADDPHDTCKHYRVPGAAGRVGFITSMTNHFCGGCNRLRLTADGSLKVCLFGSDEVSLRDALRGGATDAELLALVRAAVRRKHYSLGGKKDRHELARSDNRPMITIGG 301          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A7S0BU87 (GTP 3',8-cyclase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BU87_9RHOD)

HSP 1 Score: 233 bits (593), Expect = 4.070e-72
Identity = 115/220 (52.27%), Postives = 150/220 (68.18%), Query Frame = 0
Query:    4 GLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            GLSAVN+SLD+L P  F L+TRR    H RV+ A++  L      VK+N V+M  +ND  L  F  +TEH+ LD+RFIEYMPFDGN+W    F+ Y+  ++ +   +G L        DTSK+Y+I GFAGR+GFI+SM+ HFC  CNRLR+TADG LK CLFG  E+SLRD++RDGATDD+L E V  A+  K +ALGG +DM+ +A   NR M+ IGG
Sbjct:  159 GLSAVNISLDTLVPQKFELITRRRG--HERVIEAIDACLDANFGPVKVNCVLMRGVNDDELLDFCRMTEHKDLDIRFIEYMPFDGNRWSDKKFMSYAEAIEKITAEFGALSKVVDDENDTSKHYKISGFAGRIGFITSMTSHFCGTCNRLRMTADGNLKVCLFGSSEVSLRDMLRDGATDDELGEVVEAAIYQKYYALGGNQDMYDIASRKNRPMITIGG 376          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A6V1NXJ4 (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NXJ4_HETAK)

HSP 1 Score: 223 bits (569), Expect = 5.310e-70
Identity = 122/223 (54.71%), Postives = 145/223 (65.02%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQP-GLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            AAGL+ VN+SLD+L    F  +TRR    H  VL +L  AL    G  +K+N VVM   N+  L  F ALT  + LDVRFIE+MPFD NQW    FVPY+ ML  L   Y  LQ E     DTSK++R+PG AGRV FI+SMS+HFC  CNR+R+TADG LKTCLFG +ELSLRD +R GA D QL   V   +  K FALGG  DMH +A +DNR MV IGG
Sbjct:   40 AAGLTHVNVSLDTLRREKFRRVTRRDGLGH--VLRSLGAALDAGFGGRLKVNCVVMRGTNEGELADFVALTRDRPLDVRFIEWMPFDSNQWNTREFVPYAEMLDGLREAYPDLQREGDGPNDTSKWWRVPGHAGRVAFITSMSEHFCGSCNRVRVTADGNLKTCLFGNEELSLRDHLRAGAADWQLAHLVSRMVDRKQFALGGHGDMHGIAASDNRPMVLIGG 260          
BLAST of Ggra8633.t1 vs. uniprot
Match: M2XBY9 (GTP 3',8-cyclase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XBY9_GALSU)

HSP 1 Score: 223 bits (568), Expect = 1.300e-68
Identity = 112/221 (50.68%), Postives = 152/221 (68.78%), Query Frame = 0
Query:    3 AGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            +G+S +N+SLD+L P  F  +TRR    H  VL ++  A++    +VK+N VV+   ND  +  F  LT+  ++ VRFIEYMPF+GN+W    FV +  M Q +A  +G L+ E     DT+K++RIPGF GR+GFI+SMS+HFCAGCNRLRITADG L+ CLFG++E+SLRD MR GA+DD+L E V  A++ K+FALGG  DM  +A   NR M+ IGG
Sbjct:  137 SGVSGLNISLDTLIPVKFEFITRRRG--HKTVLDSIFKAVELGFPSVKINCVVIRGFNDDEILSFCYLTKDWNITVRFIEYMPFEGNRWNTGKFVSFEEMKQKIALEFGTLKPEQNGIHDTTKHFRIPGFVGRIGFITSMSEHFCAGCNRLRITADGNLRVCLFGDKEVSLRDYMRQGASDDELAEIVAFAVKRKDFALGGYEDMTGIASNPNRPMIHIGG 355          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A8H7ZRF2 (GTP 3',8-cyclase n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H7ZRF2_9FUNG)

HSP 1 Score: 216 bits (549), Expect = 1.240e-64
Identity = 113/220 (51.36%), Postives = 147/220 (66.82%), Query Frame = 0
Query:    4 GLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            GL+ VN+SLD+L P  F L+TRR    H +VL  +++A+   G+  K+N VV+  +ND  +  F   T H+ +DVRFIEYMPFDGN+W     VPY  +++ ++R YG L  +     DTSK YR+PGFAGR+GFI+SM+DHFCAGCNRLRITADG LK CLFG  E+S+RD MR GA+D +LLE V  A++ K     G   M  L  A NR M+ IGG
Sbjct:  240 GLNLVNISLDTLDPLKFQLITRRKG--HDKVLECVDEAVAA-GVRTKINSVVVGGVNDGEVVDFVEFTRHRPVDVRFIEYMPFDGNKWNPGKVVPYEELVRRISREYGPLARDVDETGDTSKAYRVPGFAGRLGFITSMTDHFCAGCNRLRITADGNLKVCLFGNAEVSIRDAMRGGASDAELLEIVGAAVKRKKARHAG---MFELWRAPNRPMILIGG 453          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A8H7QHL5 (GTP 3',8-cyclase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QHL5_9FUNG)

HSP 1 Score: 210 bits (534), Expect = 1.650e-63
Identity = 105/223 (47.09%), Postives = 151/223 (67.71%), Query Frame = 0
Query:    1 MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            +A+GL  +N+SLD+L PH F ++TRR      RV  A+++A+Q     VK+N VVM  +NDA +  FAA T+ + ++VRFIEYMPFDGNQW     VP+  ++  +   YGRL      A DT+K+Y++PG+ G++GFI+SM+DHFC  CNRLRITADG++K CLFG  E+SLRDL+R+ +TD+++++ +  A++ K     G   M  LA   NR M+ IGG
Sbjct:  137 VASGLDTLNVSLDTLDPHLFEIMTRRRG--FQRVTEAIDEAIQLNMKHVKINTVVMRGVNDAEVLNFAAYTKDRRVNVRFIEYMPFDGNQWNRQKLVPFKELIGRIEAVYGRLDRLTDTANDTTKHYKVPGYQGKLGFITSMTDHFCGTCNRLRITADGSIKVCLFGNTEVSLRDLIRNESTDEEIVQVISMAVKKKKKQHAG---MFELASQKNRPMILIGG 354          
BLAST of Ggra8633.t1 vs. uniprot
Match: A0A1X7V7I0 (Radical SAM core domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V7I0_AMPQE)

HSP 1 Score: 214 bits (544), Expect = 3.920e-63
Identity = 111/221 (50.23%), Postives = 147/221 (66.52%), Query Frame = 0
Query:    3 AGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            AGLS+VN+SLD+L P  F  ++RR    H RVL+A++ A+      VK+N VVM  +ND  L  F ALTE + +DVRFIEYMPFDGN+W    F+PY  ML +L  +Y  L        DTSK+Y++PG+ GRVGFI+SMS+HFC  CNRLRITADG LK CLFG  E+SL++ +R GA+D++LL  +  A++ K+    G   M  L+   NR M+ IGG
Sbjct:  140 AGLSSVNISLDTLIPQKFEFISRRRG--HERVLNAIDSAIDSGINPVKVNCVVMRGVNDDELNDFVALTEEKPIDVRFIEYMPFDGNKWNTKRFLPYHEMLSSLQNYYPSLARHQDSENDTSKHYQVPGYKGRVGFITSMSEHFCGSCNRLRITADGNLKVCLFGASEVSLKNYIRSGASDEELLPVISAAVKRKHPHHAG---MLTLSKRKNRPMILIGG 355          
BLAST of Ggra8633.t1 vs. uniprot
Match: GTP 3',8-cyclase MoaA n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI0014230F1C (GTP 3',8-cyclase MoaA n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI0014230F1C)

HSP 1 Score: 207 bits (527), Expect = 9.220e-63
Identity = 114/222 (51.35%), Postives = 145/222 (65.32%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVKLNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYSHMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGCNRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFALGGKRDMHALAVADNRSMVRIGG 223
            AAG++ +N+SLD+L P  F  +TRR     A VL A++ A+      VK+N VVM   ND  L  F ALTE + ++VRFIEYMPF GN W+ A F+PY  ML  L   +  L+        T+K YR+PGF GR+GFI+SMS+HFC GCNRLR+TADG LK CLFG  E+SLRD +R GATDD+L   +R A++ K  A  G   MH LA A+NR M+ IGG
Sbjct:  113 AAGVNLLNISLDTLRPERFDHITRRQGL--ALVLHAIDLAIAYGYDPVKVNCVVMRGFNDDELADFVALTETKPIEVRFIEYMPFAGNGWQDARFMPYRDMLARLGERFPVLERLDDGPNATAKTYRVPGFRGRIGFITSMSEHFCDGCNRLRLTADGNLKVCLFGRAEVSLRDALRAGATDDELGAIIRAAVRRKKAAHAG---MHTLAKAENRPMILIGG 329          
The following BLAST results are available for this feature:
BLAST of Ggra8633.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM97.640e-10667.71GTP 3',8-cyclase, mitochondrial n=1 Tax=Gracilario... [more]
R7QKM42.790e-8459.46Radical SAM core domain-containing protein n=1 Tax... [more]
A0A1X6P1P32.740e-7454.95Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S0BU874.070e-7252.27GTP 3',8-cyclase n=4 Tax=Rhodosorus marinus TaxID=... [more]
A0A6V1NXJ45.310e-7054.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M2XBY91.300e-6850.68GTP 3',8-cyclase n=1 Tax=Galdieria sulphuraria Tax... [more]
A0A8H7ZRF21.240e-6451.36GTP 3',8-cyclase n=1 Tax=Olpidium bornovanus TaxID... [more]
A0A8H7QHL51.650e-6347.09GTP 3',8-cyclase n=1 Tax=Mucor saturninus TaxID=64... [more]
A0A1X7V7I03.920e-6350.23Radical SAM core domain-containing protein n=1 Tax... [more]
GTP 3',8-cyclase MoaA n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI0014230F1C9.220e-6351.35GTP 3',8-cyclase MoaA n=1 Tax=Rhodocaloribacter li... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010505Molybdenum cofactor synthesis C-terminalPFAMPF06463Mob_synth_Ccoord: 77..198
e-value: 5.9E-40
score: 136.1
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..223
e-value: 2.2E-55
score: 189.9
NoneNo IPR availablePANTHERPTHR22960:SF0MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN 1coord: 2..209
NoneNo IPR availablePANTHERPTHR22960MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN Acoord: 2..209
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 2..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:77418..78089 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8633.t1Ggra8633.t1Gracilaria gracilis GNS1m malemRNAtig00000196_pilon 77418..78089 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8633.t1 ID=Ggra8633.t1|Name=Ggra8633.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSALNDALQQPGLAVK
LNVVVMSPINDASLPQFAALTEHQSLDVRFIEYMPFDGNQWRHASFVPYS
HMLQTLARHYGRLQHEPTHATDTSKYYRIPGFAGRVGFISSMSDHFCAGC
NRLRITADGALKTCLFGEQELSLRDLMRDGATDDQLLEAVRHALQLKNFA
LGGKRDMHALAVADNRSMVRIGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010505Mob_synth_C
IPR013785Aldolase_TIM