Ggra8628.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8628.t1
Unique NameGgra8628.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length286
Homology
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BLAST of Ggra8628.t1 vs. uniprot
Match: A0A2V3IHC4 (Mitotic spindle checkpoint protein BUBR1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC4_9FLOR)

HSP 1 Score: 130 bits (328), Expect = 1.640e-30
Identity = 74/129 (57.36%), Postives = 93/129 (72.09%), Query Frame = 0 
Query:    1 MRRDKLDVFSYMKRKRIGRSWMLFYEACAATLEAARQYGEVQNVYLLAKDVNYRPQDKIAQPVREFECRMPVRKKQDQKKKLDAEAKXXXEAQREVARKERKTALAEPSVASSI------ENGGTSTAK 123
            MR DKLDVFSYMKR+RIG+SW LFYEA AATLEAARQY   +++  L K VN +PQ+++ + VREF+ RM  R +++QKKK DAEA+   +A+RE AR +R T  AEPS+ASSI      E    STAK
Sbjct:  115 MRSDKLDVFSYMKRRRIGQSWTLFYEAYAATLEAARQYERAEDILALGKQVNAQPQERLQRRVREFQNRMAARARREQKKKEDAEARKNDDAKREAARMQRNTIRAEPSLASSILSQQNAEGNQASTAK 243
The following BLAST results are available for this feature:
BLAST of Ggra8628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHC41.640e-3057.36Mitotic spindle checkpoint protein BUBR1 n=1 Tax=G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..102
NoneNo IPR availableGENE3D1.25.40.430coord: 1..72
e-value: 1.6E-12
score: 49.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..104
IPR013212Mad3/Bub1 homology region 1PROSITEPS51489BUB1_Ncoord: 1..88
score: 15.987658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000196_piloncontigtig00000196_pilon:31302..32626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8628.t1Ggra8628.t1Gracilaria gracilis GNS1m malemRNAtig00000196_pilon 31302..32626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8628.t1 ID=Ggra8628.t1|Name=Ggra8628.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=286bp
MRRDKLDVFSYMKRKRIGRSWMLFYEACAATLEAARQYGEVQNVYLLAKD
VNYRPQDKIAQPVREFECRMPVRKKQDQKKKLDAEAKKMDEAQREVARKE
RKTALAEPSVASSIENGGTSTAKTAAYIKMKAINVEDDLLLKIKNWINLP
HQMRTTKTQTKPQTFPVSSPDASRRGPSPVHKQNVDSYNRPPSPTINTKT
AMPDIGDILNSSFPIEQTDDAKFSVPVPPSLSLETEMPRKPTAIKILADE
EPPEYLRTWTVDQPSVQFIGDVPVNVEPDTMVKLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013212Mad3/Bub1_I