Ggra8627.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8627.t1
Unique NameGgra8627.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length366
Homology
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A2V3IKH8 (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH8_9FLOR)

HSP 1 Score: 320 bits (821), Expect = 3.780e-104
Identity = 190/332 (57.23%), Postives = 217/332 (65.36%), Query Frame = 0
Query:   38 ASRLLHQLLRERDAIAHLRASLPKLCALLDAEIQRCRAACSPSSARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGAR------AFAPEPEPLAPLSLQXXXXXXXXXXXXXPRVSARAGARXXXXXXXXSTSLPDFSPL------SAQLLRVSGLDDLALASMRNRSAESS-----------PPQPEVKVAASTALSAGGFIGREFYNGAFSNGAVLGSSSSSRAAWDDTACSS 346
            A+RLL QLLRERD I   RASLP L ALLDAEI R RAA   +  R+RVKL VP+DKFPDYNFVGRLLGPRGTTL+TL+RD+GCRIMIRGKGSIRKDKEPDVRGKPGWEHVF+EPLHVVIEAPD L E +A+AAL+RA DAVELLLVPVPEERDALKRHQLRALAIMNGT+RGA        +  E EPLAPL                P  S R            + S+P  +PL      + +L   + LD+   +S+ + + ESS                +K+   TAL  GGF+G EFYNGAFSNGA     SS    WD T  SS
Sbjct:   29 AARLLAQLLRERDRILPFRASLPNLVALLDAEIARARAATPSTHPRKRVKLPVPSDKFPDYNFVGRLLGPRGTTLRTLERDTGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFNEPLHVVIEAPDGLQEPSASAALARAADAVELLLVPVPEERDALKRHQLRALAIMNGTYRGAPHAQYPIPYPIESEPLAPLPSPILSAYDSLSMLLEPTASLRKSPSSTDHFVDGACSIPVSTPLVNLPTLNTKLRAAASLDEFGSSSVGDDTPESSHGSEHDDAAPSTSASNLKLPTGTALGVGGFMGHEFYNGAFSNGA-----SSPTTTWDQTVSSS 355          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A7S0BGQ7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGQ7_9RHOD)

HSP 1 Score: 202 bits (513), Expect = 3.450e-58
Identity = 115/236 (48.73%), Postives = 150/236 (63.56%), Query Frame = 0
Query:   32 PSSPRQAS------RLLHQLLRERDAIAHLRASLPKLCALLDAEIQRC----------------------------------RAACSPSSARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGARAFAPEPEPLAPLSLQ 227
            P+SP ++S      + L +L++ER  +  +++  P   +++D EI R                                   R+A S   +++RVKL +PADK+P+YNFVGRLLGPRG TLK L+R++GC+IMIRG+GSIRKDKE +VRGKPGWEHVF+EPLHVVIEA    P   A+ AL+RA +A+ELLLVPVPEE D+LKR QLR LAI+NGTFRG    +   E   PL LQ
Sbjct:    7 PTSPPESSESMSTAKKLEELIKERTVMEQIKSKCPLSWSVIDTEITRLQLETQQFSGIASGMSNGATANDVNDSSHNSTSSRRSASSNMGSKKRVKLPIPADKYPEYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKETEVRGKPGWEHVFNEPLHVVIEADFEEPH--ASRALNRAKEAIELLLVPVPEENDSLKRQQLRDLAILNGTFRGG--ISEGKEAGTPLGLQ 238          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A2V3IN56 (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN56_9FLOR)

HSP 1 Score: 206 bits (525), Expect = 2.090e-57
Identity = 112/208 (53.85%), Postives = 138/208 (66.35%), Query Frame = 0
Query:   42 LHQLLRERDAIAHLRASLPKLCALLDAEIQRCRAAC--------------SPS----------SARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGARAFAPEPEPLAPLS 225
            L +L+RE + ++ ++A +P    +L+ EI R RAA                P+          S R+RVKL VPAD++P+YNFVGRLLGPRG TLK L+RD+GCRIMIRGKGSIRKDKE DVRGKPGWEHVF+EPLHVVIE  D+  E +A   L+ A   VE+LL+PVPEERD+LKR QLR LAI+NGT R         +   PLS
Sbjct:    9 LEELVREAEVLSRIKADVPNAWKILEMEIGRARAAIVRANDPEASVSLSTDPTPPLQDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEADVRGKPGWEHVFNEPLHVVIEVVDSPDELSATRILAHAKQLVEMLLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGASQHTNPLS 216          
BLAST of Ggra8627.t1 vs. uniprot
Match: M2XRR5 (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR5_GALSU)

HSP 1 Score: 200 bits (508), Expect = 1.000e-56
Identity = 105/196 (53.57%), Postives = 136/196 (69.39%), Query Frame = 0
Query:   42 LHQLLRERDAIAHLRASLPKLCALLDAEIQRCRAACSPSSA---------------------------RRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRG 210
            L  L+RER+ +  L++++P+   LL+ EI         SS+                           ++R+KL +PA K+PDYNFVGRLLGPRG TLK L+R++GC+IMIRGKGSIRKDKE +VRGKPGWEHVF+EPLHVV+EA   + E +A  AL+RA +++ELLLVPVPEE+D+LKR QLR LAI+NGTFRG
Sbjct:   10 LGDLIRERNTLETLKSAVPQTYWLLEREISEIETLLRDSSSSIQDVYFGNVNQTQNQTNKYTYNSVPVKKRIKLPIPAHKYPDYNFVGRLLGPRGATLKALERETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFNEPLHVVVEAE--MDEASALVALNRAKESIELLLVPVPEEKDSLKRQQLRDLAILNGTFRG 203          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A5J4Z4E7 (Protein quaking-A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4E7_PORPP)

HSP 1 Score: 201 bits (512), Expect = 2.030e-56
Identity = 98/128 (76.56%), Postives = 113/128 (88.28%), Query Frame = 0
Query:   83 RRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRG 210
            ++RVKL VPADK+PDYNFVGRLLGPRG TLK L+RD+GC+IMIRGKGSIRKDKE +VRGKPGWEHVF+EPLHVV+EA +   E  A  AL+RA +AVELLLVPVPE+RD+LKR QLR LAI+NGTFRG
Sbjct:  193 KKRVKLPVPADKYPDYNFVGRLLGPRGATLKALERDTGCKIMIRGKGSIRKDKEMEVRGKPGWEHVFNEPLHVVVEAENE--EAVATRALNRAKEAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRG 318          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A7S1T622 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T622_9RHOD)

HSP 1 Score: 197 bits (502), Expect = 1.500e-55
Identity = 99/147 (67.35%), Postives = 120/147 (81.63%), Query Frame = 0
Query:   80 SSARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGARAFAPEPEPLAPLSL 226
            S  ++RVKL +PADK+P YNFVGRLLGPRG TLK L+R++GC+IMIRG+GSIRKDKE +VRGKPGWEHVF+EPLHVVIEA   + E +A  AL+RA +AVELLLVPVPE+RD+LKR QLR LAI+NGTFRG      +P  L P ++
Sbjct:  138 SVVKKRVKLPIPADKYPVYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKEIEVRGKPGWEHVFNEPLHVVIEAE--MDEISATRALNRAKEAVELLLVPVPEDRDSLKRQQLRELAILNGTFRGGAL--TQPHSLGPATM 280          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A7S0ZJQ1 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJQ1_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 2.660e-55
Identity = 96/142 (67.61%), Postives = 117/142 (82.39%), Query Frame = 0
Query:   78 SPSSA--------RRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGA 211
            +PSSA        ++RVKL VPA+++P+YNFVGRLLGPRG TLK L+R++GC+IMIRG+GSIRKDKE +VRGKPGWEHVF+EPLHVVIEA     +     AL+RA +AVELLLVPVPE+RD+LKR QLR LAI+NGTFRG+
Sbjct:  196 TPSSASNSTSTLPKKRVKLAVPAERYPEYNFVGRLLGPRGATLKQLERETGCKIMIRGRGSIRKDKEGEVRGKPGWEHVFNEPLHVVIEADSMEDDAVCHRALNRAREAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRGS 337          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A7S1XEW8 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEW8_9RHOD)

HSP 1 Score: 185 bits (469), Expect = 1.810e-53
Identity = 86/128 (67.19%), Postives = 111/128 (86.72%), Query Frame = 0
Query:   82 ARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFR 209
            AR+RV++ VP +K+PDYNFVGRLLGPRG TLK L++D+GCRI+IRGKGS+RK++E +V GKPGWEHVF +PLHV+IE+  T  +  A  AL+RA +A+ELLLVPVP+++D+LKRHQLR LAI+NGTFR
Sbjct:   11 ARKRVRVPVPTEKYPDYNFVGRLLGPRGATLKKLEQDTGCRILIRGKGSVRKEREAEVVGKPGWEHVFTDPLHVIIESSST--DAHAQKALNRAKEAIELLLVPVPDDQDSLKRHQLRELAIINGTFR 136          
BLAST of Ggra8627.t1 vs. uniprot
Match: A0A1X6NLT3 (KH domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLT3_PORUM)

HSP 1 Score: 190 bits (483), Expect = 1.650e-51
Identity = 91/135 (67.41%), Postives = 113/135 (83.70%), Query Frame = 0
Query:   79 PSSARRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGARA 213
            P S ++RV+LLVPA+++P++NFVGR+LGPRG TLK L+R++ C+IMIRGKGSIR+DKE DVRGKPGWEHVF +PLHV+IE+ +   E A   AL+RA +AVELLLVPVPEERD+LKR QLR LAI+NG  R A A
Sbjct:  330 PGSTKQRVRLLVPAERYPEFNFVGRILGPRGATLKALERETACKIMIRGKGSIRRDKEADVRGKPGWEHVFQDPLHVIIES-EGADEAATTRALTRAKEAVELLLVPVPEERDSLKRQQLRDLAIINGACRAADA 463          
BLAST of Ggra8627.t1 vs. uniprot
Match: M1VE76 (Similar to RNA-binding protein QKI n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VE76_CYAM1)

HSP 1 Score: 184 bits (466), Expect = 6.500e-49
Identity = 89/143 (62.24%), Postives = 112/143 (78.32%), Query Frame = 0
Query:   83 RRRVKLLVPADKFPDYNFVGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFHEPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRALAIMNGTFRGARAFAPEPEPLAPLS 225
            ++R ++ VPAD++PDYNFVGRLLGPRG TLK L++++GC+IMIRGKGSIRKDKE +VRGKPGWEHVF EPLHV++EA   + E  A  AL RA + VELLL+PVPE+RD LKR QLR LA++NGT R +      P   +P+S
Sbjct:  435 KKRCRVSVPADQYPDYNFVGRLLGPRGATLKKLEKETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFSEPLHVILEAE--MEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAMLNGTLRQSATEHEIPTGASPMS 575          
The following BLAST results are available for this feature:
BLAST of Ggra8627.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKH83.780e-10457.23Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7S0BGQ73.450e-5848.73Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IN562.090e-5753.85Female germline-specific tumor suppressor gld-1 n=... [more]
M2XRR51.000e-5653.57RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A5J4Z4E72.030e-5676.56Protein quaking-A n=1 Tax=Porphyridium purpureum T... [more]
A0A7S1T6221.500e-5567.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZJQ12.660e-5567.61Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1XEW81.810e-5367.19Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A1X6NLT31.650e-5167.41KH domain-containing protein n=1 Tax=Porphyra umbi... [more]
M1VE766.500e-4962.24Similar to RNA-binding protein QKI n=1 Tax=Cyanidi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 82..180
e-value: 8.4E-9
score: 45.2
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 35..217
e-value: 2.2E-52
score: 179.9
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 87..209
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 87..131
e-value: 2.2E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..365
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 99..156
score: 8.407913
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 87..209
e-value: 7.39585E-49
score: 158.946
IPR045071KH domain-containing BBP-likePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 20..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000086_piloncontigtig00000086_pilon:28131..29228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8627.t1Ggra8627.t1Gracilaria gracilis GNS1m malemRNAtig00000086_pilon 28131..29228 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8627.t1 ID=Ggra8627.t1|Name=Ggra8627.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=366bp
MPARALFLPSSSPASSPSPSPAPSPAPSPARPSSPRQASRLLHQLLRERD
AIAHLRASLPKLCALLDAEIQRCRAACSPSSARRRVKLLVPADKFPDYNF
VGRLLGPRGTTLKTLQRDSGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFH
EPLHVVIEAPDTLPERAAAAALSRATDAVELLLVPVPEERDALKRHQLRA
LAIMNGTFRGARAFAPEPEPLAPLSLQPPPLAPRALKSPPPRVSARAGAR
AAAAAAAASTSLPDFSPLSAQLLRVSGLDDLALASMRNRSAESSPPQPEV
KVAASTALSAGGFIGREFYNGAFSNGAVLGSSSSSRAAWDDTACSSPSLS
ISASAATSSFEALRY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR045071BBP-like