Ggra8588.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8588.t1
Unique NameGgra8588.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length387
Homology
BLAST of Ggra8588.t1 vs. uniprot
Match: A0A2V3J5G1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G1_9FLOR)

HSP 1 Score: 325 bits (834), Expect = 1.570e-105
Identity = 178/320 (55.62%), Postives = 229/320 (71.56%), Query Frame = 0
Query:    5 SAAPGIRSSLGPFPSRDQLLADIFRLRDLEATSGQSSGTPNDRSNLDKLIKMTPEPVMARAREQPAELRALMNSALKVDPALKPRSIPESNAFEAAFIALSWLMSAVKQVSRQQAHHVPNPI--QPAIPPSSAVVQSKNPFSIPTALAQPDLDNQDSDNSEDNDNVRPTKKKKSVINPKSFSIGVSNAHRSTLAQYPGKGIMATTLNVEELMGPSTLSLLISQGTDVMTFLQRHFEHWKRPQSGHPTAPEMEAISLARMIHLERLIHDSPKQALEQRPSLEVDLRCLFVILGVQEDLSTGVHFDRRDALEEVHHLLETVP 322
            SA   +R+SL PFP RDQLL D+ RL DLEA++   + T  DR NLD L+KM+P+  MA ARE+  EL+ LM S++  D +LK RS+PESN FEAA +A+SWL+SAV+Q+  Q  +  PN    Q  +  ++++  S NP S      +    N +SDNSED+  +RP KK K V+NPKS+ IG++NA++STLA+YPGK  MAT+LN+++L+GP+ LSL    GTD+M FL  HF+HWKRP SG PTA +MEAIS+ RM HLE LIHDS +QALEQRPSL+V LR L+ IL VQEDLS GV  DRR+ALEEVH L E VP
Sbjct:   88 SAPSELRTSLCPFPFRDQLLGDVLRLHDLEASAATKNITSTDRRNLDTLMKMSPDQGMALARERLDELKVLMKSSVIADSSLKLRSVPESNPFEAAAVAISWLLSAVQQL--QSGNSQPNQANNQHILASATSLSGSGNPLSFLQPSPKTAAANINSDNSEDDAEIRPAKKAKPVVNPKSYYIGMANAYQSTLARYPGKRNMATSLNIDDLIGPAILSLRTYHGTDIMKFLLHHFQHWKRPASGLPTAQKMEAISIGRMTHLEILIHDSARQALEQRPSLQVGLRRLYAILCVQEDLSNGVQNDRRNALEEVHCLFEVVP 405          
BLAST of Ggra8588.t1 vs. uniprot
Match: A0A2V3II27 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II27_9FLOR)

HSP 1 Score: 105 bits (263), Expect = 1.920e-23
Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 0
Query:    5 SAAPGIRSSLGPFPSRDQLLADIFRLRDLEATSGQSSGTPNDRSNLDKLIKMTPEPVMARAREQPAELRALMNSALKVDPALKPRSIPESNAFEAAFIALS 105
            SA P +R+SLGPFP RD LL D+FRLRDLE  +  SS + +D  N  KL+K TP  +M+ AR+   +L+ LM S+ K DP+LK R +PESN FEAA IA+S
Sbjct:   86 SAPPELRTSLGPFPPRDSLLGDVFRLRDLELAAA-SSASASDHHNHTKLMKTTPAQIMSLARDYLEQLKTLMKSSTKADPSLKHRIVPESNQFEAASIAIS 185          
BLAST of Ggra8588.t1 vs. uniprot
Match: A0A2V3IIJ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIJ3_9FLOR)

HSP 1 Score: 72.8 bits (177), Expect = 1.910e-11
Identity = 46/119 (38.66%), Postives = 64/119 (53.78%), Query Frame = 0
Query:    5 SAAPGIRSSLGPFPSRDQLLADIFRLRDLEATSGQSSGTPNDRSNLDKLIKMTPEPVMARAREQPAELRALMNSALKVDPALKPRSIPESNAFEAAFIA-----LSWLMSAVKQVSRQQ 118
            SA P +R++    P++ QLLAD+FRLR  EA    SS       +L+KL+  + + +     + P EL+ +MNSALK D  L PR IPE N  EA  +A     LS+  S      R+Q
Sbjct:   46 SAPPHLRTTFSDPPTKPQLLADLFRLRQAEAA--MSSDPQAVMQDLEKLLSTSQDGLRKMTNDDPNELKRMMNSALKADATLSPREIPE-NPLEAGMVAIERQYLSYRQSTPHSAQRRQ 161          
The following BLAST results are available for this feature:
BLAST of Ggra8588.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5G11.570e-10555.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II271.920e-2354.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIJ31.910e-1138.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000116_piloncontigtig00000116_pilon:280038..281198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8588.t1Ggra8588.t1Gracilaria gracilis GNS1m malemRNAtig00000116_pilon 280038..281198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8588.t1 ID=Ggra8588.t1|Name=Ggra8588.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=387bp
MWWSSAAPGIRSSLGPFPSRDQLLADIFRLRDLEATSGQSSGTPNDRSNL
DKLIKMTPEPVMARAREQPAELRALMNSALKVDPALKPRSIPESNAFEAA
FIALSWLMSAVKQVSRQQAHHVPNPIQPAIPPSSAVVQSKNPFSIPTALA
QPDLDNQDSDNSEDNDNVRPTKKKKSVINPKSFSIGVSNAHRSTLAQYPG
KGIMATTLNVEELMGPSTLSLLISQGTDVMTFLQRHFEHWKRPQSGHPTA
PEMEAISLARMIHLERLIHDSPKQALEQRPSLEVDLRCLFVILGVQEDLS
TGVHFDRRDALEEVHHLLETVPQGTIRSQDRGSCHTKNIHEEEATDCHQG
NSRVPRQTTPAPDHRAPQNSERRSSDARDKHRFARN*
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