Ggra8574.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8574.t1
Unique NameGgra8574.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length183
Homology
BLAST of Ggra8574.t1 vs. uniprot
Match: R7Q2S5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2S5_CHOCR)

HSP 1 Score: 106 bits (264), Expect = 3.540e-24
Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = 0
Query:    1 MLSRPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTLSMR-----RLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQS 126
            +L R DG+I + ++MLAG GAG  QV+AT PME++MINMQ++    R     ++I +L ++GLY    A L RDIPFS+V F M   LR   T  DG L    V LA I AG+TAA  S P DVI+TRLQ+
Sbjct:  106 LLVRKDGTISIPNSMLAGAGAGFCQVVATNPMEMMMINMQSAASRGRAVNTLQMIRQLGLAGLYKGTPATLFRDIPFSIVFFSMNAALRQRLTDSDGRLPIAKVFLAGIAAGSTAATLSTPMDVIKTRLQA 236          
BLAST of Ggra8574.t1 vs. uniprot
Match: A0A1X6NQM0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQM0_PORUM)

HSP 1 Score: 98.2 bits (243), Expect = 7.510e-21
Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = 0
Query:    2 LSRPD-GSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTL-------SMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQS 126
            L+ PD G++ +AS++LAG GAGL QV+AT PME+LMI M T          S+  L+ +L + GLY    A L RD+PFSMV F M   ++     ++G ++   V LA I AG+TAAA S P DVI+TRLQ+
Sbjct:  171 LADPDTGTVSLASSVLAGAGAGLCQVVATCPMEMLMITMMTRAAEDGRKPKSLTHLVRELGLPGLYRGTLATLARDVPFSMVFFSMNAAVKERLADDNGSVSIGRVFLAGITAGSTAAALSTPMDVIKTRLQA 303          
BLAST of Ggra8574.t1 vs. uniprot
Match: A0A7J7IJK8 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJK8_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 7.520e-19
Identity = 59/119 (49.58%), Postives = 73/119 (61.34%), Query Frame = 0
Query:   15 MLAGVGAGLTQVIATKPMEVLMINMQTSTLSMRR------LIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLR-HFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQS 126
            M+AG GAGL QV+AT PMEVLMI MQT + + +        ++ L + GLY  V A L RDIPFSMV F + T L+ H   +  G L    V    ILAG TAAA S P DV++TR+QS
Sbjct:    1 MMAGAGAGLCQVVATNPMEVLMITMQTRSAAGKHGPGLVGTVHSLGLRGLYRGVQAALARDIPFSMVFFGLNTSLKEHLAPRYQGALPIGAVFGIGILAGATAAALSTPLDVVKTRIQS 119          
BLAST of Ggra8574.t1 vs. uniprot
Match: M1VIP3 (Probable calcium-binding mitochondrial carrier protein Aralar n=2 Tax=cellular organisms TaxID=131567 RepID=M1VIP3_CYAM1)

HSP 1 Score: 91.3 bits (225), Expect = 2.930e-18
Identity = 65/130 (50.00%), Postives = 75/130 (57.69%), Query Frame = 0
Query:    4 RPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTL------SMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKE-DGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQS 126
             P G + +   MLAG GAGL QVIAT PMEVLMI MQT         S+   I  L + GLY  VSA L RDIPFSMV F M T L+   +    G L    V    IL+G TAAA S P DV++TR+QS
Sbjct:  258 NPHGPLSVKQGMLAGAGAGLCQVIATNPMEVLMITMQTRAAHGHPQHSVTDTIRMLGLRGLYRGVSATLTRDIPFSMVFFGMNTSLKERLSLHYQGGLPMRIVFGVGILSGVTAAALSTPFDVVKTRIQS 387          
BLAST of Ggra8574.t1 vs. uniprot
Match: M2VX08 (Mitochondrial carrier n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VX08_GALSU)

HSP 1 Score: 86.3 bits (212), Expect = 6.430e-17
Identity = 57/131 (43.51%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    2 LSRPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTL------SMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQS 126
            LS   G     ++++AG GAG  QVIAT PME+LMI  QT +       S+ +L+ +L I G+Y  + A L RD+PFSM+ F    +L+  F      LA P V ++ I AG  AA  S P DVI+TRLQS
Sbjct:  126 LSDEQGKTSFMNSIIAGAGAGFCQVIATCPMEMLMITFQTRSSQGQPIHSVTQLVKELGIRGIYKGLIATLCRDVPFSMIFFSTNAHLKATFQGSSERLAIPYVFVSGIGAGCLAAVLSTPMDVIKTRLQS 256          
BLAST of Ggra8574.t1 vs. uniprot
Match: A0A1V9ZCH4 (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCH4_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.390e-16
Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    7 GSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTST---LSMRR----LIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQSISA 129
            G + M   +LAG GAG  QVIAT PME++ I +QT     L+ R+    ++ +L I GLY   SA LLRD+P+++V FP    LR  +  E+G  + P +  A   AG  AAA + PPDVI+T+ Q I A
Sbjct:  104 GVLPMHKQILAGAGAGFCQVIATNPMEIVKIRIQTQDRLPLAERKSAVEVVKQLGIRGLYKGTSACLLRDVPYAIVFFPTYATLRDTWADENGHTSMPAIVTAGCAAGAFAAAIATPPDVIKTKRQMIGA 233          
BLAST of Ggra8574.t1 vs. uniprot
Match: L8H1J4 (Calciumbinding mitochondrial carrier protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H1J4_ACACA)

HSP 1 Score: 84.3 bits (207), Expect = 1.060e-15
Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 0
Query:    7 GSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQT------STLSMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQ 125
            G I+    +LAG GAG +QVI T P+E++ I +Q       +  S  ++  +L  +GLY   SA  LRDIPFS + FP    L+  F  E+G L+  N+ LA  LAG  AA+ + P DVI+TRLQ
Sbjct:  509 GEIYFPLEVLAGAGAGASQVIFTNPLEIVKIRLQVQGETPGAKKSAYQICKELGFTGLYRGASACFLRDIPFSGIYFPAYAKLKQSFRDEEGRLSNTNLLLAGSLAGVAAASTTTPADVIKTRLQ 633          
BLAST of Ggra8574.t1 vs. uniprot
Match: K3X550 (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X550_GLOUD)

HSP 1 Score: 81.6 bits (200), Expect = 3.230e-15
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    7 GSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTST-------LSMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQ 125
            G + +   +LAG GAGL QVIAT P E++ I +QT         L+  +++  L I GLY      L+RDIP++++ FPM   ++  FT  +G  +  ++ LA   AG TAA    P DVI+TR Q
Sbjct:  130 GKLTLGKQVLAGAGAGLAQVIATNPTEIVKIRLQTQAALPPAERLTAAQVVQSLGIRGLYKGAGVCLMRDIPYAVIFFPMYATIKDAFTDAEGNNSITSIVLAGATAGATAAGLCTPADVIKTRRQ 255          
BLAST of Ggra8574.t1 vs. uniprot
Match: W7TVG3 (Putative mitochondrial aspartate-glutamate transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVG3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.670e-15
Identity = 55/143 (38.46%), Postives = 78/143 (54.55%), Query Frame = 0
Query:    2 LSRPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTL-------SMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFF----TKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQSISATKRF 133
            L  PDGS+ +   M+AG GAGL QV+AT PME++ I MQ   L       S   ++  L + G+Y   +A L RDIPFS++ FP+   L+  F    TKE+ I +      A  LAG   +  + P DVI+TRLQ     +++
Sbjct:  110 LESPDGSLPLHKEMIAGAGAGLCQVVATNPMEIVKIRMQMQALLPPAERQSTMEVVRGLGLRGMYQGTTATLSRDIPFSLIFFPLYANLKKAFADPKTKENSIASLLG---AGGLAGAMGSWAATPADVIKTRLQLAGGKEKY 249          
BLAST of Ggra8574.t1 vs. uniprot
Match: F4Q1H9 (EF-hand domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q1H9_CAVFA)

HSP 1 Score: 81.6 bits (200), Expect = 9.010e-15
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 0
Query:    4 RPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTL----SMRRLIYKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVSLAVILAGTTAAAPSKPPDVIETRLQ 125
            +  G I++   +LAG GAG +QV+ T P+E++ I +Q  T     S   ++ +L ++GLY    A LLRDIPFS + FP    ++     +DG LA  ++ LA ++AG  AA+   P DVI+TRLQ
Sbjct:  477 KSKGEIYLPLEVLAGGGAGASQVLFTNPLEIVKIRLQVQTAGKGASAISIVRELGLTGLYKGAGACLLRDIPFSAIYFPAYAKMKTVLADKDGNLAPRHLFLAGMVAGIPAASLVTPADVIKTRLQ 602          
The following BLAST results are available for this feature:
BLAST of Ggra8574.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q2S53.540e-2449.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NQM07.510e-2146.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IJK87.520e-1949.58Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VIP32.930e-1850.00Probable calcium-binding mitochondrial carrier pro... [more]
M2VX086.430e-1743.51Mitochondrial carrier n=1 Tax=Galdieria sulphurari... [more]
A0A1V9ZCH42.390e-1643.08Mitochondrial Carrier (MC) Family n=1 Tax=Thrausto... [more]
L8H1J41.060e-1542.40Calciumbinding mitochondrial carrier protein n=1 T... [more]
K3X5503.230e-1538.89Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W7TVG35.670e-1538.46Putative mitochondrial aspartate-glutamate transpo... [more]
F4Q1H99.010e-1539.68EF-hand domain-containing protein n=1 Tax=Cavender... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 9..90
e-value: 1.0E-5
score: 25.3
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 9..86
score: 10.842524
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10Mitochondrial carrier domaincoord: 11..182
e-value: 2.6E-17
score: 64.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 5..130
NoneNo IPR availablePANTHERPTHR45678MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATEDcoord: 2..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000116_piloncontigtig00000116_pilon:57719..58267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8574.t1Ggra8574.t1Gracilaria gracilis GNS1m malemRNAtig00000116_pilon 57719..58267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8574.t1 ID=Ggra8574.t1|Name=Ggra8574.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=183bp
MLSRPDGSIFMASAMLAGVGAGLTQVIATKPMEVLMINMQTSTLSMRRLI
YKLRISGLYNNVSAVLLRDIPFSMVLFPMKTYLRHFFTKEDGILATPNVS
LAVILAGTTAAAPSKPPDVIETRLQSISATKRFVWPTATTALSSAPHTIH
PGAPTSQSAHAMSSSAASPNSHLTIVQCARCI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom_sf