Ggra857.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra857.t1
Unique NameGgra857.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra857.t1 vs. uniprot
Match: A0A8A3AW80 (Peptidoglycan-binding protein n=2 Tax=unclassified Dolichospermum TaxID=2622029 RepID=A0A8A3AW80_9CYAN)

HSP 1 Score: 177 bits (448), Expect = 1.180e-51
Identity = 88/188 (46.81%), Postives = 119/188 (63.30%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGIS-FVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            CST +  GL+ Q+I E+N +  +  V+ +D +    S    P+LQ +AK+AL  A   +   + +NSAYR+ AQQ+LL  W  + QCNIP AARPG S HEDGLA+D   +  W S LE   WDWFG+ D VHFT+ GS     +    ++AFQ+LWN+NNP DQI  DG +GP TAARL  +P +G+
Sbjct:   16 CSTAIVRGLSLQIIAEMNLLIPNVLVNFEDLNINPTSQAVNPFLQPAAKEALRRAIQTRGTTLKINSAYRTVAQQHLLRSWHENGQCNIPRAARPGLSNHEDGLALDTPDFQAWISALENEGWDWFGNADSVHFTYRGSGVRDDIGDIGVKAFQQLWNKNNPNDQITIDGTFGPQTAARLDMSPAEGF 203          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A8F4QWX2 (Putative peptidoglycan-binding domain-containing protein n=1 Tax=Richelia sinica FACHB-800 TaxID=1357546 RepID=A0A8F4QWX2_9NOST)

HSP 1 Score: 175 bits (444), Expect = 4.850e-51
Identity = 90/189 (47.62%), Postives = 118/189 (62.43%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGIS-FVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWF-LDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            CST +  GL+ Q+I E+N +  +  V+ DD +    SS   P+LQ +AK+AL  A   K   + +NSAYR+ AQQ+LL  W+ L  QC  P AARPG S HEDGLA+D   +  W S LE   WDWFG  D VHFT+ GS     +    ++AFQ+LWN+NNP+DQI  DG +G  TAARL R P +G+
Sbjct:   16 CSTSIVRGLSLQIIAEMNLLIPNVLVNFDDLNISAASSAVNPFLQPAAKEALRRAIRTKGGTLRINSAYRTVAQQHLLRSWYELGGQCAPPRAARPGLSNHEDGLALDTPDFQGWMSALENEGWDWFGRGDEVHFTYRGSGVRDDIGDIGVKAFQQLWNKNNPSDQITVDGQFGAQTAARLDRCPAEGF 204          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A3S1C2W0 (Uncharacterized protein n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A3S1C2W0_ANAVA)

HSP 1 Score: 171 bits (433), Expect = 2.180e-49
Identity = 86/189 (45.50%), Postives = 120/189 (63.49%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGISF-VSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWF-LDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            CST + +GL+ Q+I E+N +  +  V+ +D +    S P   +LQ +AK+AL  A  ++   + + SAYR+ AQQ+LLY WF L  QC  P AA+PG S HEDGLA+D   +  W S LE   WDWFG+ D VHFT+ GS     +    ++AFQ+LWN+NNP DQI  DG +GP TAA+L  +P +G+
Sbjct:   16 CSTAIVAGLSLQIIAEMNLLIPNILVNFEDLNVSAASPPVNLFLQPAAKEALRRAIRKRGTTLNITSAYRTVAQQHLLYSWFKLGGQCAPPRAAKPGLSNHEDGLALDTPDFQAWISALENEGWDWFGNADSVHFTYRGSGVRDDIGDIGVKAFQQLWNKNNPNDQITVDGGFGPQTAAKLDMSPAEGF 204          
BLAST of Ggra857.t1 vs. uniprot
Match: peptidoglycan-binding protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F3B8464 (peptidoglycan-binding protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F3B8464)

HSP 1 Score: 176 bits (446), Expect = 3.200e-49
Identity = 87/189 (46.03%), Postives = 121/189 (64.02%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGISFVSLDDRDRFRCSSPCV-PYLQQSAKDALEAATLEK-NDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            CST    GL  Q+I E+N +  + ++  +      SSP + P+LQ +AK+AL  A   + N  + + SAYR+ AQQY+L+QWF   QC IP AA PGRS HEDGLA+D+  YS WRS LE+  W WF S+D VHFT++     + +    L+AFQ LWN++NP D I+ DG++GP TA RL  +P +G+
Sbjct:   16 CSTATTQGLNLQIIAEMNLLVPNVLTSFEDLNVAISSPAINPFLQPAAKEALRRAIRSRGNTTLQITSAYRTVAQQYILWQWFQRGQCGIPDAATPGRSNHEDGLALDIPDYSAWRSPLEREGWQWFNSQDPVHFTYMAGGVRNDIGDIGLKAFQILWNKHNPNDLIETDGLFGPETAKRLDLSPAEGF 204          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A8J7DKX1 (Peptidoglycan-binding protein n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7DKX1_9CYAN)

HSP 1 Score: 170 bits (431), Expect = 3.800e-49
Identity = 87/191 (45.55%), Postives = 118/191 (61.78%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGIS-FVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGS---RDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            C T    GL+ Q+IDE+N +  S  V+++D +    SS   PYLQ +AK+AL  A   +   + + SAYR+ AQQYLL +WF   +CNI AAARPG S HEDGLA+D   +  WR+ LE   WDW G    +D  HFTFVG      +    ++AFQ+LWN+N P DQI  D ++GP TA RL ++P +G+
Sbjct:   16 CGTSTVRGLSLQIIDEMNLLIPSVLVNIEDLNVKLESSGVNPYLQPAAKEALRRAITRRRATLHITSAYRTVAQQYLLRRWFEMGKCNIGAAARPGFSNHEDGLALDTPDFDAWRTALEAEKWDWLGDTNHKDPFHFTFVGGSVRDDIGDIGVKAFQQLWNKNKPDDQISVDNVFGPQTAKRLDQSPSEGF 206          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A482S1L8 (VanY domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1L8_9ARCH)

HSP 1 Score: 167 bits (423), Expect = 6.050e-48
Identity = 92/200 (46.00%), Postives = 122/200 (61.00%), Query Frame = 0
Query:   18 SACTLGTATGCST-DVASGLTTQLIDELNSMGISFVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSW-DWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQ-IDEDGIYGPNTAARLSRAPCDGW 214
            S C LGT + C    +  G+T Q++ ELNSMG SF  L+   R  C +     LQ SA  +LE+A     D+ITLNSA+RSSA+QY+LY ++   +C I  AA PG+S HE G AID   YS+W  TL ++ W   + S D VHF + G+   S +  ++L AFQRL+NR+  +   I EDGIYGP+TA  L  APC GW
Sbjct:   78 SGCILGTVSSCDAYSLTVGMTNQIVAELNSMGYSFRGLNP-SRVHCGAGMSCTLQSSAASSLESAAASIGDYITLNSAFRSSAEQYILYNFYKSGRCGITLAATPGQSNHEGGRAIDTSYYSYWAGTLGKYGWVHSYPSSDPVHFDYSGA---SDIASQNLRAFQRLYNRHRGSSPAIAEDGIYGPDTANALYHAPCGGW 273          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A2T1DBG3 (D-alanyl-D-alanine carboxypeptidase n=1 Tax=filamentous cyanobacterium CCP2 TaxID=2107700 RepID=A0A2T1DBG3_9CYAN)

HSP 1 Score: 167 bits (423), Expect = 6.570e-48
Identity = 85/188 (45.21%), Postives = 114/188 (60.64%), Query Frame = 0
Query:   28 CSTDVASGLTTQLIDELNSMGIS-FVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            CST    GL+ Q+IDE+N +  +  VS D+ D     +    +LQ  AK++L  A   +   + LNS YR+  QQ++L+ W     C I  AARPGRS HEDG AID   ++ WRS LE   WDWFG  D VHFT+VG      V    ++AFQ LWN++NP D+I+ DG+YGP TA+RL R+P  G+
Sbjct:   16 CSTAAVKGLSLQIIDEMNLLIPNVLVSFDELDVSGNEATVNFFLQPRAKESLRRAIRRRGVTLRLNSVYRTVVQQHILFSW--RGSCGISIAARPGRSNHEDGFAIDTPDFAAWRSALEAEGWDWFGPPDEVHFTYVGGGVRDDVGDIGVKAFQILWNKHNPTDKIETDGLYGPETASRLDRSPTSGF 201          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A4U1HU64 (VanY domain-containing protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HU64_9DELT)

HSP 1 Score: 164 bits (415), Expect = 4.050e-46
Identity = 88/197 (44.67%), Postives = 121/197 (61.42%), Query Frame = 0
Query:   23 GTATGCSTDVASGLTTQLIDELNSM-GISFVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDF--ITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLE--AFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
              +  CST    GL+ Q+I+E   M G ++V +         S   PYL++ AKDAL AA L+ N    +T+NS  R+ AQQYLLY+W+   +C I  AA+PG S HE GLA+D+  YS W+S+L    + W GS D VHF + GS +   V  K L+  AFQRLWNRN+P D+ID DG++GP T AR+ ++P  G+
Sbjct:   73 AVSASCSTSSVKGLSLQIINEARCMNGDAYVQVPKLANVTFGSAVFPYLEKPAKDALVAA-LKANPSRSMTINSGLRTVAQQYLLYRWYQQGRCGIGLAAKPGSSNHETGLALDISQYSAWKSSLTSRGFKWLGSGDPVHFDYAGSGA---VSHKGLDVKAFQRLWNRNHPEDKIDTDGVWGPQTEARMKKSPTKGF 265          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A6P0T1L1 (Peptidoglycan-binding protein n=1 Tax=Moorena sp. SIO2I5 TaxID=2607825 RepID=A0A6P0T1L1_9CYAN)

HSP 1 Score: 160 bits (406), Expect = 5.580e-46
Identity = 89/205 (43.41%), Postives = 122/205 (59.51%), Query Frame = 0
Query:   11 SIKVFHISACTLGTATGCSTDVASGLTTQLIDELNSMGI-SFVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            SIKV  I+ C+L            GL  QLID LN +   S VS +D +         PYLQ +AK AL+ A  E+   + + SAYR+ AQQ +L+    D++C IP AARP RS H+ GLA+D+R Y  W+  LE++ W W G +D  HF +VG+++   +R  S+ AFQ+LWN NNP D+I EDGIY   T  RL+ +P DG+
Sbjct:   23 SIKVKDITTCSLSKGMA----EVHGLDQQLIDRLNILRPNSLVSFEDLN-VEMDGATWPYLQPAAKQALQQAIDERGIRLVVASAYRTIAQQLVLWNLPRDERCRIPIAARPSRSNHQSGLALDIRDYQGWKPFLEKYGWRWLGPKDAPHFDYVGANTRD-IRANSVRAFQQLWNLNNPTDRIIEDGIYNAVTEQRLNNSPVDGF 221          
BLAST of Ggra857.t1 vs. uniprot
Match: A0A8D5QVP1 (VanY domain-containing protein n=2 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A8D5QVP1_MICAE)

HSP 1 Score: 160 bits (405), Expect = 9.400e-46
Identity = 84/195 (43.08%), Postives = 118/195 (60.51%), Query Frame = 0
Query:   21 TLGTATGCSTDVASGLTTQLIDELNSMGISFVSLD-DRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQQYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWDWFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGPNTAARLSRAPCDGW 214
            T    T CST V  GL  QLI ++N + +S   +D    + R      P+LQ +AK AL+ A   +   + +NSAYR+ AQQ LL+Q    ++C I  AA PG+S H+ GLA+D+  ++ WR  LE   W W G  D VHF F G+     +R  ++ AFQ+LWN+NNP D+I EDG +GPNTAARL ++P +G+
Sbjct:    5 TQAGTTSCSTTVVRGLDRQLIAQMNRL-VSGALVDFSSPKIRLGQAVWPFLQPAAKRALDRAVANRGQTLIVNSAYRTIAQQLLLFQHDQANRCGITIAAEPGKSNHQSGLALDIEDHAGWRPFLEAQGWKWLGPSDPVHFDFKGAGVRD-IRSTAILAFQQLWNQNNPNDRIAEDGQWGPNTAARLGKSPANGF 197          
The following BLAST results are available for this feature:
BLAST of Ggra857.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8A3AW801.180e-5146.81Peptidoglycan-binding protein n=2 Tax=unclassified... [more]
A0A8F4QWX24.850e-5147.62Putative peptidoglycan-binding domain-containing p... [more]
A0A3S1C2W02.180e-4945.50Uncharacterized protein n=3 Tax=Nostocaceae TaxID=... [more]
peptidoglycan-binding protein n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F3B84643.200e-4946.03peptidoglycan-binding protein n=1 Tax=Leptodesmis ... [more]
A0A8J7DKX13.800e-4945.55Peptidoglycan-binding protein n=1 Tax=Romeria aff.... [more]
A0A482S1L86.050e-4846.00VanY domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A2T1DBG36.570e-4845.21D-alanyl-D-alanine carboxypeptidase n=1 Tax=filame... [more]
A0A4U1HU644.050e-4644.67VanY domain-containing protein n=2 Tax=Polyangium ... [more]
A0A6P0T1L15.580e-4643.41Peptidoglycan-binding protein n=1 Tax=Moorena sp. ... [more]
A0A8D5QVP19.400e-4643.08VanY domain-containing protein n=2 Tax=Microcystis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009045Hedgehog signalling/DD-peptidase zinc-binding domain superfamilyGENE3D3.30.1380.10coord: 56..186
e-value: 4.2E-10
score: 41.1
IPR009045Hedgehog signalling/DD-peptidase zinc-binding domain superfamilySUPERFAMILY55166Hedgehog/DD-peptidasecoord: 68..165
IPR003709Peptidase M15BPFAMPF02557VanYcoord: 77..144
e-value: 6.5E-7
score: 29.2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..28
score: 5.0
NoneNo IPR availableCDDcd14814Peptidase_M15coord: 75..188
e-value: 4.62593E-24
score: 90.1929

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000178_piloncontigtig00000178_pilon:255408..256052 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra857.t1Ggra857.t1Gracilaria gracilis GNS1m malemRNAtig00000178_pilon 255408..256052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra857.t1 ID=Ggra857.t1|Name=Ggra857.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MKLLIILLPLSIKVFHISACTLGTATGCSTDVASGLTTQLIDELNSMGIS
FVSLDDRDRFRCSSPCVPYLQQSAKDALEAATLEKNDFITLNSAYRSSAQ
QYLLYQWFLDDQCNIPAAARPGRSRHEDGLAIDVRSYSFWRSTLEQFSWD
WFGSRDRVHFTFVGSDSSSGVRRKSLEAFQRLWNRNNPADQIDEDGIYGP
NTAARLSRAPCDGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009045Hedgehog_sig/DD-Pept_Zn-bd_sf
IPR003709Pept_M15B