Ggra8552.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8552.t1
Unique NameGgra8552.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length113
Homology
BLAST of Ggra8552.t1 vs. uniprot
Match: M2Y4E9 (ADP-ribosylation factor isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4E9_GALSU)

HSP 1 Score: 154 bits (388), Expect = 2.270e-45
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0
Query:   19 WLSNGRTHTH-YYKNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            WL N   +   YYKNAK+LFLGLDNAGKTTLMHVLRDD+VA+HIPT QPTAEEVV+GNI+FRAFDLGGHAAA QIWRNYY  VD +V++V+A DR
Sbjct:    4 WLFNILAYLGLYYKNAKILFLGLDNAGKTTLMHVLRDDKVAQHIPTQQPTAEEVVIGNIKFRAFDLGGHAAARQIWRNYYTKVDAIVYMVDAADR 98          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A1X6PED4 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PED4_PORUM)

HSP 1 Score: 145 bits (366), Expect = 5.080e-42
Identity = 67/83 (80.72%), Postives = 75/83 (90.36%), Query Frame = 0
Query:   30 YKNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            +KNA+ LFLGLDNAGKTTLMHVLRDDRVA H+PT QPTAEE+V+G +RFRAFDLGGH AA QIWRNYYA VD VVFLV++VDR
Sbjct:   16 HKNARCLFLGLDNAGKTTLMHVLRDDRVALHVPTQQPTAEEIVIGAVRFRAFDLGGHEAARQIWRNYYAKVDAVVFLVDSVDR 98          
BLAST of Ggra8552.t1 vs. uniprot
Match: M1UXI1 (Small GTP-binding protein Sar1 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXI1_CYAM1)

HSP 1 Score: 140 bits (354), Expect = 3.980e-40
Identity = 64/95 (67.37%), Postives = 79/95 (83.16%), Query Frame = 0
Query:   19 WLSNGRTHTH-YYKNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            WL N  ++   YYKNAK+LFLGLDNAGKTTLMHVL+DDR+A+H+PT   T+EEV++GN+RFRAFDLGGH  A QIWRNYY  VD +V++V+A DR
Sbjct:    4 WLWNLLSYLGLYYKNAKILFLGLDNAGKTTLMHVLKDDRLAQHVPTQHATSEEVILGNVRFRAFDLGGHEVARQIWRNYYTNVDAIVYIVDANDR 98          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A7J6L5X2 (COPII coat GTPase n=5 Tax=Perkinsus TaxID=28000 RepID=A0A7J6L5X2_PEROL)

HSP 1 Score: 133 bits (335), Expect = 3.350e-37
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0
Query:   30 YKNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            +KNAK+LFLGLDNAGKTTL+H+L+DD+VA H+PTL P +EE+++G IRFR FDLGGH  A +IW++YYA VDG++FLV+A DR
Sbjct:   18 HKNAKILFLGLDNAGKTTLLHMLKDDKVATHVPTLHPCSEELLIGKIRFRTFDLGGHETARRIWKDYYATVDGIIFLVDAADR 100          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A7J6LYP5 (COPII coat GTPase n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LYP5_PEROL)

HSP 1 Score: 132 bits (332), Expect = 6.410e-37
Identity = 56/82 (68.29%), Postives = 72/82 (87.80%), Query Frame = 0
Query:   31 KNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            KNAK+LFLGLDNAGKTTL+H+L+DD+VA H+PTL P +EE+++G IRFR FDLGGH  A +IW++YYA VDG++FLV+A DR
Sbjct:   19 KNAKILFLGLDNAGKTTLLHMLKDDKVATHVPTLHPHSEELLIGKIRFRTFDLGGHETARRIWKDYYATVDGIIFLVDAADR 100          
BLAST of Ggra8552.t1 vs. uniprot
Match: C5KQW2 (Small GTP-binding protein sar1, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KQW2_PERM5)

HSP 1 Score: 131 bits (329), Expect = 2.490e-36
Identity = 56/82 (68.29%), Postives = 72/82 (87.80%), Query Frame = 0
Query:   31 KNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            KNAK+LFLGLDNAGKTTL+H+L+DD+VA H+PTL P +EE+++G IRFR FDLGGH  A +IW++Y+A VDG+VFLV+A DR
Sbjct:   19 KNAKILFLGLDNAGKTTLLHMLKDDKVATHVPTLHPHSEELLIGKIRFRTFDLGGHETARRIWKDYFATVDGIVFLVDAADR 100          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A7S2LSY9 (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LSY9_9DINO)

HSP 1 Score: 130 bits (326), Expect = 6.680e-36
Identity = 55/82 (67.07%), Postives = 72/82 (87.80%), Query Frame = 0
Query:   31 KNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            KNAK+LFLGLDNAGKTTL+H+L+DDRVA H+PTL P +EE+++ NIRFR +DLGGH  A +IW++Y+A VDG++FLV+A DR
Sbjct:   33 KNAKILFLGLDNAGKTTLLHMLKDDRVATHVPTLHPHSEELMIKNIRFRTYDLGGHETARRIWKDYFATVDGIIFLVDAADR 114          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A7S1S0R8 (Hypothetical protein (Fragment) n=2 Tax=Gonyaulacales TaxID=40984 RepID=A0A7S1S0R8_ALECA)

HSP 1 Score: 129 bits (325), Expect = 9.470e-36
Identity = 55/82 (67.07%), Postives = 71/82 (86.59%), Query Frame = 0
Query:   31 KNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            KNAK+LFLGLDNAGKTTL+H+L+DDRVA H+PTL P  EE+++ NIRFR +DLGGH  A +IW++Y+A VDG++FLV+A DR
Sbjct:   21 KNAKILFLGLDNAGKTTLLHMLKDDRVATHVPTLHPHTEELMIKNIRFRTYDLGGHETARRIWKDYFATVDGIIFLVDAADR 102          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A812WLC8 (SAR1B protein n=2 Tax=Suessiales TaxID=89954 RepID=A0A812WLC8_9DINO)

HSP 1 Score: 130 bits (326), Expect = 1.320e-35
Identity = 55/82 (67.07%), Postives = 72/82 (87.80%), Query Frame = 0
Query:   31 KNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            KNAK+LFLGLDNAGKTTL+H+L+DDR+A H+PTL P +EE+++ NIRFR +DLGGH  A +IW++Y+A VDG+VFLV+A DR
Sbjct:   45 KNAKILFLGLDNAGKTTLLHMLKDDRIATHVPTLHPHSEELMIKNIRFRTYDLGGHETARRIWKDYFATVDGIVFLVDAADR 126          
BLAST of Ggra8552.t1 vs. uniprot
Match: A0A7S3F673 (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F673_9VIRI)

HSP 1 Score: 129 bits (325), Expect = 1.470e-35
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0
Query:   13 AKWVNRWLSNGRTHTH-YYKNAKVLFLGLDNAGKTTLMHVLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMVDGVVFLVNAVDR 112
            A WV  W  +       ++K+AK+LFLGLDNAGKTTL+H+L+D+R+A+H PT  PT+EE+ +G IRF+AFDLGGH  A ++W++YYA VDG+V+LV+A+DR
Sbjct:   61 AMWVMDWFYSALASLGLWHKDAKILFLGLDNAGKTTLLHMLKDERLAQHQPTQYPTSEELQIGKIRFKAFDLGGHEIARRVWKDYYAKVDGIVYLVDALDR 161          
The following BLAST results are available for this feature:
BLAST of Ggra8552.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2Y4E92.270e-4575.79ADP-ribosylation factor isoform 1 n=2 Tax=Galdieri... [more]
A0A1X6PED45.080e-4280.72Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M1UXI13.980e-4067.37Small GTP-binding protein Sar1 n=1 Tax=Cyanidiosch... [more]
A0A7J6L5X23.350e-3767.47COPII coat GTPase n=5 Tax=Perkinsus TaxID=28000 Re... [more]
A0A7J6LYP56.410e-3768.29COPII coat GTPase n=3 Tax=Perkinsus olseni TaxID=3... [more]
C5KQW22.490e-3668.29Small GTP-binding protein sar1, putative n=1 Tax=P... [more]
A0A7S2LSY96.680e-3667.07Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A7S1S0R89.470e-3667.07Hypothetical protein (Fragment) n=2 Tax=Gonyaulaca... [more]
A0A812WLC81.320e-3567.07SAR1B protein n=2 Tax=Suessiales TaxID=89954 RepID... [more]
A0A7S3F6731.470e-3556.44Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 62..86
score: 63.53
coord: 34..57
score: 75.25
coord: 89..112
score: 47.74
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 13..112
e-value: 0.0026
score: 8.9
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 28..112
e-value: 2.3E-29
score: 102.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 9..112
e-value: 6.1E-31
score: 109.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 31..111
IPR006687Small GTPase superfamily, SAR1-typePANTHERPTHR45684RE74312Pcoord: 27..112
NoneNo IPR availablePANTHERPTHR45684:SF31OS06G0225000 PROTEINcoord: 27..112
NoneNo IPR availablePROSITEPS51422SAR1coord: 26..112
score: 9.900776

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:167481..167819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8552.t1Ggra8552.t1Gracilaria gracilis GNS1m malemRNAtig00000191_pilon 167481..167819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8552.t1 ID=Ggra8552.t1|Name=Ggra8552.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=113bp
MVRLYLSVHAIIAKWVNRWLSNGRTHTHYYKNAKVLFLGLDNAGKTTLMH
VLRDDRVAKHIPTLQPTAEEVVVGNIRFRAFDLGGHAAAHQIWRNYYAMV
DGVVFLVNAVDR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase
IPR006687Small_GTPase_SAR1