Ggra8548.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8548.t1
Unique NameGgra8548.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1107
Homology
BLAST of Ggra8548.t1 vs. uniprot
Match: A0A2V3J4Z9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Z9_9FLOR)

HSP 1 Score: 536 bits (1381), Expect = 1.460e-169
Identity = 352/940 (37.45%), Postives = 509/940 (54.15%), Query Frame = 0
Query:  173 LDPAEEQQQGSLWSQIRKDHLKSLLVDPRFVLRSAQVERDDFLKAYMRLHHFAHADRLSDLLGPASRPSEYCQFLLNFMLDLYNKAEVRTKIG-QTRCYVAHRTLLVNHDGYYPDHDPIIRRLDSLERKKKQTREVADASSSLDRK-GDTYQEELIHLAEERLVDESDQEEPEETRYKSQRLQLQDKEMDQLCDFASYILRSYIYNVSGETFYSADEFAKYSQEQGLSFLDAAQADVEHHFDRLKWLNEPVLAPTLGRAKTIKEPLQLWQHAINSFSVKNLARCALIQSDSLLDWLEHVTRLKNNPSSLEEFYASERPVVCFAPVALLYLADTAIDFALEVLRAAISFAE--KDDLYEEATEKAHEEMKEL---DDEDVDSKLAESGETSEELSTLIERVDIHRAASCKYMKSAQASSFILNQILQIGPLPDGSPNPRWF--EAEWSQRKVRPYTASTEFELCSRDPAVKVTVPDSAMIETRAILMGINSFHHMLLYTKGSGLSGVPKKLRKSLSSEEARRFTKEAHESWKKASGGRNVPKKVETVSAEKEAIRPARTDLVPSEKGQAVLKQTEGTNVHKVKEVENAARENGEAKGKEQRNEPQISDEGVRSKDNETTGNEQVVSKLVPEMMDLDMMNQSKTSTQEAIAKNEDMAGPEETSNTRKSGEGVTGKASEENASKDIQSETKPTTDIIINSEAKKIPSSGIERRPVMGPSSQNMCEAFSKDTTSKQEMKGDEAVNSAPKPPLQDERESFTEDATSGGKNERKEKYSTFFGVANLAEGILASVGLKEWRSIKFEDMKATLAKLTGESTTDDEQTSTEDGEEDGLLRHRASSICYNRLRWIVLHALGINMEEKLSAEKPLGYASTANYANFRQFRSKKPLAIADDAFFLLAQLTEQFVRCEAEILMECAAHDDGRPWIDRADVALVHAVRKKDFPY 1103
            LD +E  + G+LW+++R++ +  LL+D RFV RS QVERDDFLKA +RL H  H +RLS LLG +SRP +YC+FLLN ML  YN  ++R KI  ++R +  H  + V HD  YPD+DPII+RLD L+++ +  +       ++  + GD+YQ+ELI L+++ +  ESDQEE E  ++ SQ LQ  D  +++  ++ASY+LRSY++++SGETFY+ ++FAK+ Q+ G+ FLDA ++DV H    LKW+NEP+LA T+G+  TIKEPLQLW+HA+++FS +NLARCALI+++SLLDWLE+V  LKN    +E+ +  ERPVVC APVALL+L+D A +FAL+VLR A+  AE  +D    E  E   E    +   D E  +  L    + +E+   +IE  DIH+AA  K +++      +   IL      D +    +   E++W +RK+RPYT++  F+LCSR P   V++P SA+ E RAI+MG+    H  +YT G+G                           W                               P  +  A+ ++ E + V                        P I  +G R +   T GN+           D  + + S        +           +N   + E + G     ++  +  +ET P   +  N + +             G S Q     F+    +  E    E   S P   +Q    ++  D      N  K+KY+ FF   N A+ + A    K   S++ +D+ A     +   +  +E+  T+ G++D  LRH +SS+CYNR  WIVLHALGIN+ ++ S  +PL YAS ANY NFR F S K L+I  +A + LA LTE  VR EAEILMECA  DDGRPWIDRADVALVHAVRKK+FPY
Sbjct:  213 LDLSENLKLGTLWTRLRENLMADLLIDHRFVPRSHQVERDDFLKACIRLRHMVHPNRLSVLLGTSSRPPQYCEFLLNAMLGFYNVPDIRRKIDPRSRFFKTHVHIDVYHDALYPDNDPIIKRLDRLQKRDESAKGSDHERLAVSGQCGDSYQDELILLSDDPIDRESDQEENETPKFVSQLLQYADSVVEEFAEYASYVLRSYMHSISGETFYNVNDFAKHCQQLGIPFLDAQRSDVNHDDGDLKWINEPILAATIGKRSTIKEPLQLWKHAVDNFSEQNLARCALIRTNSLLDWLEYVVILKNPKRRIEDHFMYERPVVCLAPVALLHLSDIAANFALDVLRTAVRIAETEQDCQAAEKNENVAEGANGIRVQDSEGRNEHLKPDNDDNEDEDLVIEIGDIHKAARSK-LRNTACEGAVAMHILSDDVKHDSNKFIDFLRTESQWPRRKIRPYTSAETFKLCSRFPVAVVSIPHSAICEKRAIVMGMTYLRHNDVYTPGAGAF-------------------------W-------------------------------PRRRLPALRRRLELSEV------------------------PYIGAQGSRVEGAVTGGNQ-----------DRGVSDPSTNVANGLTSXXXXXXXXAIQANCTVNSEKIVGARPTPSSDNNNDNETTPQGGVTGNVQTQVTGE---------GDSQQQRSAKFA----ALHEKGAAENTGSCPGQDIQGSTAAYHSDLAKRRWNTMKKKYTEFFNDTNEAKKLRAQYANK---SVQPKDLHAAAVSRSKTDSESEEEVDTDIGDDD-YLRHSSSSLCYNRFHWIVLHALGINIGQRTSVHRPLTYASAANYTNFRHFTSTKALSIDREALYELASLTELIVRDEAEILMECAIQDDGRPWIDRADVALVHAVRKKEFPY 1043          
BLAST of Ggra8548.t1 vs. uniprot
Match: R7Q9Q2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9Q2_CHOCR)

HSP 1 Score: 99.0 bits (245), Expect = 1.740e-17
Identity = 54/114 (47.37%), Postives = 72/114 (63.16%), Query Frame = 0
Query:  994 RHRASS-ICYNRLRWIVLHALGINMEEKLSAEKPLGYASTANYANFRQFRSKKPLAIADDAFFLLAQLTEQFVRCEAEILMECAAHDDGRPWIDRADVALVHAVRKKDFPYKTL 1106
            RH  SS +  +RL WI LHALG +  E+    K + + S ANY NF +F + + + ++      LA   +Q VR EAEILM CAAHDDGRPWIDRADV ++ +VRK+ + Y  L
Sbjct:  510 RHLPSSTVSLHRLAWICLHALGQDTGEEDG--KLMSFGSRANYTNFGEFGTPEKVTLSLQGLSTLAGFADQIVREEAEILMACAAHDDGRPWIDRADVIVISSVRKEPYLYAGL 621          
The following BLAST results are available for this feature:
BLAST of Ggra8548.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4Z91.460e-16937.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9Q21.740e-1747.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 525..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 722..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..861
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 913..928
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 739..778

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:153414..156734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8548.t1Ggra8548.t1Gracilaria gracilis GNS1m malemRNAtig00000191_pilon 153414..156734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8548.t1 ID=Ggra8548.t1|Name=Ggra8548.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1107bp
MEGTDNFAKRKQPDEPHGRPPQPVFKRQRKQAPEDFELEPDDTEQRNAEF
LTQSQVKEDLLEEAMLLGIPSKFDDDPNIEKDENFSDAQADSLSDVEAEQ
SIKPQVEVIDVDALESQPSTNEITATPKPTNFVLYRPIPWGLEQARAHEQ
RRLLAKFKAHPEFSEAFRTQSWLDPAEEQQQGSLWSQIRKDHLKSLLVDP
RFVLRSAQVERDDFLKAYMRLHHFAHADRLSDLLGPASRPSEYCQFLLNF
MLDLYNKAEVRTKIGQTRCYVAHRTLLVNHDGYYPDHDPIIRRLDSLERK
KKQTREVADASSSLDRKGDTYQEELIHLAEERLVDESDQEEPEETRYKSQ
RLQLQDKEMDQLCDFASYILRSYIYNVSGETFYSADEFAKYSQEQGLSFL
DAAQADVEHHFDRLKWLNEPVLAPTLGRAKTIKEPLQLWQHAINSFSVKN
LARCALIQSDSLLDWLEHVTRLKNNPSSLEEFYASERPVVCFAPVALLYL
ADTAIDFALEVLRAAISFAEKDDLYEEATEKAHEEMKELDDEDVDSKLAE
SGETSEELSTLIERVDIHRAASCKYMKSAQASSFILNQILQIGPLPDGSP
NPRWFEAEWSQRKVRPYTASTEFELCSRDPAVKVTVPDSAMIETRAILMG
INSFHHMLLYTKGSGLSGVPKKLRKSLSSEEARRFTKEAHESWKKASGGR
NVPKKVETVSAEKEAIRPARTDLVPSEKGQAVLKQTEGTNVHKVKEVENA
ARENGEAKGKEQRNEPQISDEGVRSKDNETTGNEQVVSKLVPEMMDLDMM
NQSKTSTQEAIAKNEDMAGPEETSNTRKSGEGVTGKASEENASKDIQSET
KPTTDIIINSEAKKIPSSGIERRPVMGPSSQNMCEAFSKDTTSKQEMKGD
EAVNSAPKPPLQDERESFTEDATSGGKNERKEKYSTFFGVANLAEGILAS
VGLKEWRSIKFEDMKATLAKLTGESTTDDEQTSTEDGEEDGLLRHRASSI
CYNRLRWIVLHALGINMEEKLSAEKPLGYASTANYANFRQFRSKKPLAIA
DDAFFLLAQLTEQFVRCEAEILMECAAHDDGRPWIDRADVALVHAVRKKD
FPYKTL*
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