Ggra8537.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8537.t1
Unique NameGgra8537.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
BLAST of Ggra8537.t1 vs. uniprot
Match: M2VVP7 (MA3 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVP7_GALSU)

HSP 1 Score: 65.5 bits (158), Expect = 2.680e-11
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    2 RSPKSPSASGRAGRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            RSP SP+      R ++RH S  G RGLPKKGGAGGKGVWG+   Q+G ++LDK DPNYDSD
Sbjct:   18 RSPPSPTK-----RLYNRH-SAVG-RGLPKKGGAGGKGVWGSMWVQDGKSFLDKNDPNYDSD 72          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A7N0TUB2 (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TUB2_KALFE)

HSP 1 Score: 61.6 bits (148), Expect = 1.480e-8
Identity = 36/72 (50.00%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    2 RSPKSPSASGRAGRQF-----------DRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDS 62
            RSPKSP+  G  G +            DRH     T G PKKGGAGGKG+WG  +D +G  +LD KDPNYDS
Sbjct:   41 RSPKSPAGKGHQGGKRVSSKAGSPLKKDRHSHSPKT-GKPKKGGAGGKGIWGGLLDTDGSHFLDAKDPNYDS 111          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A401NL58 (Programmed cell death protein 4 n=3 Tax=Scyliorhinus TaxID=7829 RepID=A0A401NL58_SCYTO)

HSP 1 Score: 57.0 bits (136), Expect = 5.710e-7
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = 0
Query:    5 KSPSASGRAGRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            ++PS+ G+ G +  R   G   RGLPKKGGAGGKGVWGAA     V   D +DPNYD D
Sbjct:   69 EAPSSKGKMGDKKSRSGKG---RGLPKKGGAGGKGVWGAAAQVYDVEQPDIRDPNYDDD 124          
BLAST of Ggra8537.t1 vs. uniprot
Match: programmed cell death protein 4-like n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E75B0 (programmed cell death protein 4-like n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E75B0)

HSP 1 Score: 56.6 bits (135), Expect = 7.790e-7
Identity = 31/55 (56.36%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    9 ASGRAGRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            ASG  G+  D+       RGLPKKGGAGGKGVWGAA     V   D +DPNYD D
Sbjct:   70 ASGTKGKMGDKKSRSGKGRGLPKKGGAGGKGVWGAAAQVYDVEQPDIRDPNYDDD 124          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A1I8I134 (Programmed cell death protein 4 n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8I134_9PLAT)

HSP 1 Score: 56.2 bits (134), Expect = 1.080e-6
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   24 TGTRGLPKKGGAGGKGVWGA-AMDQEGVAYLDKKDPNYDSD 63
            TG RGLPKKGGAGGKGVWG    + + V  LD+ DPNYDSD
Sbjct:  128 TGLRGLPKKGGAGGKGVWGQPGSELDAVGVLDENDPNYDSD 168          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A401RI31 (Programmed cell death protein 4 n=5 Tax=Orectolobiformes TaxID=30503 RepID=A0A401RI31_CHIPU)

HSP 1 Score: 55.8 bits (133), Expect = 1.450e-6
Identity = 31/59 (52.54%), Postives = 37/59 (62.71%), Query Frame = 0
Query:    5 KSPSASGRAGRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            ++P   G+ G +  R   G   RGLPKKGGAGGKGVWGAA+    V   D +DPNYD D
Sbjct:   69 EAPGTKGKMGDKKSRSGKG---RGLPKKGGAGGKGVWGAAVQVYDVEQPDIRDPNYDDD 124          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A3P3YKT2 (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YKT2_PLABS)

HSP 1 Score: 55.8 bits (133), Expect = 1.540e-6
Identity = 30/46 (65.22%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   17 FDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQE-GVAYLDKKDPNYD 61
             DRH SG+G RG PKKGGAGGKG WG+  D     A LDK DPNYD
Sbjct:  644 LDRH-SGSGVRGEPKKGGAGGKGTWGSVTDHTVAPAALDKNDPNYD 688          
BLAST of Ggra8537.t1 vs. uniprot
Match: programmed cell death protein 4-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7785EA (programmed cell death protein 4-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7785EA)

HSP 1 Score: 53.5 bits (127), Expect = 2.930e-6
Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0
Query:   27 RGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            RGLPKKGGAGGKG WG   D+  + ++D  DPNYDSD
Sbjct:   99 RGLPKKGGAGGKGTWGKLGDEIDLPWVDPNDPNYDSD 135          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A2J8W777 (Programmed cell death protein 4 (Fragment) n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A2J8W777_PONAB)

HSP 1 Score: 54.3 bits (129), Expect = 3.070e-6
Identity = 29/50 (58.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   14 GRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            GR  DR       RGLPKKGGAGGKGVWG       V  +D KDPNYD D
Sbjct:   83 GRLLDRRSRSGKGRGLPKKGGAGGKGVWGTPGQVYDVEEVDVKDPNYDDD 132          
BLAST of Ggra8537.t1 vs. uniprot
Match: A0A851FF03 (PDCD4 protein (Fragment) n=1 Tax=Pitta sordida TaxID=9163 RepID=A0A851FF03_PITSO)

HSP 1 Score: 52.8 bits (125), Expect = 3.140e-6
Identity = 28/50 (56.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:   14 GRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGVAYLDKKDPNYDSD 63
            G+  DR       RGLPKKGGAGGKGVWG       V  +D KDPNYD D
Sbjct:   81 GKLLDRRSRSGKGRGLPKKGGAGGKGVWGTPGQVYDVEEVDIKDPNYDDD 130          
The following BLAST results are available for this feature:
BLAST of Ggra8537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2VVP72.680e-1161.29MA3 domain-containing protein n=1 Tax=Galdieria su... [more]
A0A7N0TUB21.480e-850.00Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A401NL585.710e-754.24Programmed cell death protein 4 n=3 Tax=Scyliorhin... [more]
programmed cell death protein 4-like n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7E75B07.790e-756.36programmed cell death protein 4-like n=1 Tax=Carch... [more]
A0A1I8I1341.080e-668.29Programmed cell death protein 4 n=4 Tax=Macrostomu... [more]
A0A401RI311.450e-652.54Programmed cell death protein 4 n=5 Tax=Orectolobi... [more]
A0A3P3YKT21.540e-665.22Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
programmed cell death protein 4-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C7785EA2.930e-664.86programmed cell death protein 4-like n=1 Tax=Euryt... [more]
A0A2J8W7773.070e-658.00Programmed cell death protein 4 (Fragment) n=2 Tax... [more]
A0A851FF033.140e-656.00PDCD4 protein (Fragment) n=1 Tax=Pitta sordida Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000191_piloncontigtig00000191_pilon:126462..126839 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8537.t1Ggra8537.t1Gracilaria gracilis GNS1m malemRNAtig00000191_pilon 126462..126839 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8537.t1 ID=Ggra8537.t1|Name=Ggra8537.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MRSPKSPSASGRAGRQFDRHVSGTGTRGLPKKGGAGGKGVWGAAMDQEGV
AYLDKKDPNYDSDQEQQQQQQQQQQQQQPPQLELGANAPPPGAAAPEAQS
TPAAAGADAAASAADAPAEQQQQQQ*
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