Ggra8495.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8495.t1
Unique NameGgra8495.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length637
Homology
BLAST of Ggra8495.t1 vs. uniprot
Match: A0A2V3IT96 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT96_9FLOR)

HSP 1 Score: 881 bits (2277), Expect = 0.000e+0
Identity = 442/637 (69.39%), Postives = 532/637 (83.52%), Query Frame = 0
Query:    1 MVGRYRGLRAELSTILAVDEYAQQPVQHDVPPPNESISAHLAHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHALDDQDLSPRTSRSYLAPLLAPSMRNETDDVIFLSPLDYFFICMIASSTCKYVNAPGASTTKIPKRSRSIPSIRAQYNQVISAYAVLRDPSAAVDNNDIFIPTCLDYLIIPWVTASPTKLPYLSTSTADAIATLLLALPPSSPRDLDLSAES--CNLATNRMMNFRFVTNSGALYCFLPSMLDMIFSNYDSATPIFPLNAYIRVLSLMIAPWRQSIRSTAAQMLLPKPKPNKGQQGNGSQPMTAWSSTLSSINAHLPSSTGSPGNATSVKEAKWREELGQRHSKCDKALLRSAVILAASMHIASSADGVRVLSLLTEAAQSARLYSVTVPEEDPDRMEELQLCLDALRDQKSQLQRKGGHRGRNFIPILAANLGDKPSNGGVLRGISEIVGVGRGKVVSAVNGGSSSSTRRRLKDFRDNWMGSAQDVDVPFIGNVWDRPISGNESEMLVLFAYWLAVKMEPRLGFLPNIRFLGQYWVWGLIAFFCFLILVTKSVVASL 635
            M  RYRGLRAELSTILAVDE+AQ+P+Q D+PPPNE IS+HLA+LI RAT HPDEARTVYAYLP+I+LRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFC +HTRPRS  IDF HDMRFEF RRNLP LTN ALD   +    SRSYLAPLLA S+RN+ DDVIFLSPLDYF ICMIAS T K+VNAPG+S+ KIPKRSRSIPS+RAQYNQVI+AYA LR  +A+VD++DIFI  CLDYL IPW+TA P+ LPYLSTS ADA+A+LLLAL P+SP+DLDL  E+    L  + M++    TN G LY    SML+ +FSN+D++ PIFPLN+YIRVL+++IAPWRQS+RST + MLLPKPKP+KG++ + +  M A SSTLSSINAHLPSS  SPGNAT+V++++WRE+L  R +  DK LLR+AV+LAA+MH+AS ADG RV++LL +AAQ ARLYS+T+P +DPDR+EELQLCLDALR Q+S+LQRK G R +NFIPILA+NLGDK  NGGV  GISE+VGVG  +V+S VNG S S+T+RRLKDF++NWMG  +  +VPFIG+VWDRPI+GNESEM+V+FAYW+A+++EPRLG+LPN RFLGQYWVW + A    +  VTK VV+SL
Sbjct:    1 MSRRYRGLRAELSTILAVDEFAQRPLQQDLPPPNEPISSHLANLILRATNHPDEARTVYAYLPAIILRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCKEHTRPRSTKIDFGHDMRFEFARRNLPPLTNAALDSDRIPTPGSRSYLAPLLASSLRNKADDVIFLSPLDYFVICMIASPTQKFVNAPGSSSVKIPKRSRSIPSLRAQYNQVITAYAALRSANASVDSDDIFILACLDYLFIPWITALPSNLPYLSTSAADAVASLLLALAPTSPKDLDLDLETDDSTLGNHYMVDIHLFTNCGVLYRLTASMLENLFSNFDASAPIFPLNSYIRVLAMLIAPWRQSVRSTVSLMLLPKPKPSKGKRPSRTS-MAALSSTLSSINAHLPSSA-SPGNATAVRDSEWREQLRSRQTLIDKHLLRTAVVLAANMHVASVADGSRVMALLADAAQGARLYSITLPNDDPDRLEELQLCLDALRGQRSRLQRKNGSREKNFIPILASNLGDKTKNGGVFSGISEMVGVGSAQVLSQVNGESLSTTKRRLKDFKENWMGRGRSQEVPFIGSVWDRPIAGNESEMMVIFAYWIALRLEPRLGYLPNTRFLGQYWVWIMTAIIFVVSWVTKRVVSSL 635          
BLAST of Ggra8495.t1 vs. uniprot
Match: R7Q4E9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4E9_CHOCR)

HSP 1 Score: 464 bits (1193), Expect = 6.740e-153
Identity = 250/601 (41.60%), Postives = 377/601 (62.73%), Query Frame = 0
Query:   28 HDVPP----PNESISAHLAHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHALDDQD----LSPRTS-RSYLAPLLAPSMRNETDDVIFLSPLDYFFICMIASSTCKYVNAPGASTTKIPKRSRSIPSIRAQYNQVISAYAVLRDPSAAVDNNDIFIPTCLDYLIIPWVTASPT-KLPYLSTSTADAIATLLLALPPSSPRDLDLSAESCNLATNRMMNFRFVTNSGALYCFLPSMLDMIFSNYDSATPIFPLNAYIRVLSLMIAPWRQSIRSTAAQMLLPKPKPNKGQQGNGSQPMTAWSSTLSSINAHLPSSTGSPGNATSVKEAKWREELGQRHSKCDKALLRSAVILAASMHIASSADGVRVLSLLTEAAQSARLYSV-TVPEEDPDRMEELQLCLDALRDQKSQLQRKGGHRGRNFIPILAANLGDKPSNGGVLRGISEIVGVGRGKVVSAVNGGSSSSTRRRLKDFRDNWMG---SAQDVDVPFIGNVWDRPISGNESEMLVLFAYWLAVKMEPRLGFLPNIRFLGQYWV 614
            HD+ P    P E  + HLA LI  +  HPD+ R VY +LP +MLR+FG+  G GWLET SELPS+DRDAL+   +P GP+ T+C +++ PR  +++F  DMRFEFP  +LP  T  AL +      + P T  +S+LAP L  S+++  +  ++LSP+DYF+ICM+AS T K+  + G +  +  +RS S+PS RA YN+ I++YA   + +  V  N +F+ TCLD+L +PW +  P+ + P  ST+ A+++ ++LLAL P++P  LDL  +   +     +++R  TN+ A+Y     ML+ +  +Y+    + PL AY+R+L+L IAPWR SIR+  +  L PK K +  +  + +  M A +STLSSINAHL S +GSPGNA+SVKE++WR EL +R    D  LLR A++ AA     +  +G RVL++L EAAQ+ARL    +  E D D+ EEL+ CL ALR+Q ++ +R    R R++I  LAA++G +  +G                    VN  S S   + LK+ R   +    ++ +  VPF+GNVWDRPI+  E+E++V++ YWLA+++EPRLG++PN+RFLG+YW+
Sbjct:    2 HDLQPDSLAPTEPTTTHLAQLILASFSHPDDIRIVYEFLPLLMLRVFGYRQGHGWLETASELPSKDRDALIRFTMPGGPIDTYCRRNSPPRDAAVNFDVDMRFEFPVSSLPLATRDALREGPSAALVRPITDGQSFLAPFLFSSLKDTDEKNVYLSPIDYFYICMVASPTRKWAPSSGQNPARRVRRSASLPSTRALYNRTIASYASALNGTDRVGPNSLFLATCLDFLFMPWASYRPSSEPPVASTNAAESVTSILLALAPAAPSALDLDLDFHPMDVPDELDWRIQTNTSAVYRAAEKMLENVLKHYEPEASLGPLVAYMRILALYIAPWRASIRNGLSACLFPKKKTSSSRSNHRTPSMAAITSTLSSINAHLASPSGSPGNASSVKESQWRTELKERQRSVDDELLRLAIVKAAHRRFPAFPEGSRVLAVLAEAAQAARLAGTWSSRERDMDKAEELKNCLLALRNQIAESERSSARRERSYIGTLAASVGIRLESGVXXXXXXXXXXXXXXXXXXVVNMLSGSPHGKNLKELRQRRLSVFRTSDEESVPFLGNVWDRPIAEGENEVVVVWLYWLALRLEPRLGYVPNLRFLGRYWI 602          
BLAST of Ggra8495.t1 vs. uniprot
Match: A0A7S2ZQ50 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQ50_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 9.370e-24
Identity = 161/650 (24.77%), Postives = 256/650 (39.38%), Query Frame = 0
Query:   41 LAHLITRATEHPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHAL--------------DDQDLSPRTSRS--YLAPLLA-------PSMRNET-------------DDVIFLSPLDYFFICMIASSTCKYVNAPGASTTKIPKRSRSIPSIRAQYNQVISAYAVLRDPSAAVDN-------NDIFIPTCLDYLIIPWVTASPTKLPYLSTSTADAIATLLLALPPSSPRD----LDLSAESCNLATNRMMNFRFVTNSGALYCFLPSMLDMI---------FSNYDSATPIFPLNAYIRVLSLMIAPWRQSIRSTAAQMLLPKPKPNKGQQGNGSQPMT-AWSSTLSSINAHLPSSTGSPGNATSVKEAKWREELGQRHSKCDKALLRSAVILAASMHIASSADGVRVLSLLTEAAQ----SARLYSVTVPEEDPDRMEELQLCLDALRDQKSQLQRKGGHRGRNF------IPILAANLGDKPSNGGVLRGISEIVGVGRGKVVSAVNGGSSSS-TRRRLKDFRDNWMGSAQDV----------DVPFIGNVWDRPISGNESEMLVLFAYWLAVKMEPRLGFLPNIRFLGQY 612
            L   + R     +E R VY   P +ML+IFGF   +GWLE  S + S+DRDA++ ++LP+GPLH      T P         +  FEFP  NLP  T + +              D  +L P  S++  YL  + A       PS  N +               ++ LS  +YF +CM +S   +  +     + +   RS  +PS RA +N + S+YA    P    D          +F+   L++     ++++       ++ T DA+  L L + P +P +    L   AE   L     +    +T S  L     S+   +           +  S +    L +++R  SL I PW Q  RS A +  LP+   ++G   +  + +  +    ++ +     S  G       + E  W E +     +    L R     AA + + ++ DG  +L LL+EA      +  L S       P    + +  L  L  Q S   R+  H   NF      +  LA  LG   S  G   G   + G  RG +      G++S   R+ L+   ++     + V          DV FIG  WD P    E   L+   Y L+++M  R     N+RFL  Y
Sbjct:   63 LGFALGRVISGEEEFRPVYEGFPRLMLKIFGFGD-EGWLEDASRVQSKDRDAVLKVLLPNGPLHRLVCA-TAP---------EYTFEFPVSNLPLSTQNDINTIRQQHPIPGSESDRTNLDPYLSQNGKYLPRVSAGVLGDRDPSQLNSSLLSWFCWMRLSNSGSLLTLSCYEYFLLCMCSSPLWRGRSGSSGMSGRRRTRSSLLPSRRAVFNYLFSSYANFFAPKDHSDRAGQGPAYGKLFLAASLEFFCRAPLSSNDPP----TSGTMDALTILALHVQPRTPLEATEALPKRAELYALRNGPKLADPQLTGSIGLATMRKSVASELRYLGAEAEGLWSASSTSGSAVLISFMRSTSLFIVPWNQHARSLAEKRTLPRRSRSRGVAASALEYLPPSIGDRINDLQDSAASRVGRDSGELDIGE--WAEVISHLDLEITYVLPRFTE-RAAKLSLGATEDGSHLLELLSEAFSPRPIANALASARSTFSGPWYSSDSESNLRELATQISSYMRQSHHAVDNFTHKRTDLNGLACALGVALSIPGA--GSYTLQGFQRGLLDRGRKAGNASERVRKVLEPEHEDVEVMRKQVALGQRKFSNRDVEFIGGPWDLPPFSYELASLLPPLYALSIEMSARFHVDVNLRFLASY 692          
BLAST of Ggra8495.t1 vs. uniprot
Match: A0A7S1TDU4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDU4_9RHOD)

HSP 1 Score: 109 bits (273), Expect = 1.900e-21
Identity = 155/603 (25.70%), Postives = 245/603 (40.63%), Query Frame = 0
Query:   79 LETCSELPSRDRDALVSIVLPDGPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHALDD-------------QDLSPRTSRS--YLAPLLAPSMRNETDDVIFLSPLDYFFICMIASSTCKYVNAPGASTTKIPKRSRSIPSIRAQYNQVISAYAVL---RDPSAAVDNNDIFIPTCLDYLIIPWVTASPTK--LPYLSTSTA----------DAIATLLLALPPSSPRDLDLSAESCNLATNRMMNFRFVTNSGALYCFLPSMLDMIFSNYDSATPIFPLN-------AYIRVLSLMIAPWRQSIRSTAAQMLLPKPKPNKGQQGNGSQPMTAWSSTLSSINAHLPSSTGSPGNATSVKEAK----WREELGQRHSKCDKAL--LRSAVILAASMHIASSADGVRVLSLLT------EAAQSARLYSVTVPEEDP-DRMEELQLCLDALRDQKSQLQRKGGH-------RGRNFIPI--LAANLGDKP-SNGGVLRGISEIVGVGRGKVVSAVNGGSSSSTRRRLKDFRDNW-----MGSAQDV----DVPFIGNVWDRPISGNESEMLVLFAYWLAVKMEPRLGFLPNIRFLGQY 612
            +E  +E P+R+R+ALV +  P G +             ++ +  D  FE+P  N P     A++              QD+S        +L     P +       I +S  +Y  +C++A++  K   +    T+K P+RS S+PS RA YNQ+IS Y       D S   D  ++F     DY I  W+  +P++  LP    S A          DAI  L + L P SP D    A       N + +  + T+S  L      +  ++   +      +P N       A +R  ++ +APW +          LPK + +  +        T+  S + ++   +P+          V+EA+    W E L +R    D  L  L +A+  AA + I S  +G  VLS L        AA+  R    TV E       E+L   L +L  Q      KG         RG N   +  L   LG  P + G     + +I+  G  K     +       R+ L++ R +      +GS+  V    DV F+G VW+RP+  +E   LV+ AY L++ +E R     N+RFLG +
Sbjct:    1 MEDFAERPNREREALVHLFGPSGSIF----------QSALAYCADCYFEYPLNNFPDNLQLAIERILVGGSSREGGTVQDVSELGEEPDPWLLSFCLPRVGGLVTSSITVSSAEYVVLCLVANAFWKPQPSQSMYTSKKPRRSSSLPSRRALYNQLISLYMTYFWPSDDSEPSDLGELFTRAVADYWI-GWMVTNPSRDILPRRRGSAATFSPPTVEVADAICRLCVTLCPLSPGD---DAIMHAFQANGLGSSPYSTSSVTLPRARALLQPLLRRAFSDCFQCWPANRNSTAFIAMLRAFNVFVAPWSRRACYAVQDKTLPKDRSSSAR--------TSSRSVVRAVLEQIPTFQSLGHAIPPVEEARLFREWEEFLWRRK---DLYLTDLPNALTRAAILRIGSIPEGGDVLSTLAGSFKLEAAAELIRRSVRTVYETGVLPNSEDLSSALVSLASQIDDSLYKGASSVESLRARGPNSQDLQPLCILLGLPPLARGAGSTRLHQIMTSGAWK-----SRADHEDARKALQELRRSVEPPQSLGSSGAVYSNRDVSFVGGVWERPLRSDEIRPLVMLAYRLSIFLENRFHRPFNLRFLGSF 573          
BLAST of Ggra8495.t1 vs. uniprot
Match: A0A7S1TDQ0 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDQ0_9RHOD)

HSP 1 Score: 83.2 bits (204), Expect = 3.390e-14
Identity = 61/221 (27.60%), Postives = 99/221 (44.80%), Query Frame = 0
Query:   54 EARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPDGPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHALDD-------------QDLSPRTSRS--YLAPLLAPSMRNETDDVIFLSPLDYFFICMIASSTCKYVNAPGASTTKIPKRSRSIPSIRAQYNQVISAYAVL---RDPSAAVDNNDIFIPTCLDYLIIPWVTASP 256
            + R +   LP +M+++ GF    GW+E  +E P+R+R+ALV +  P G +             ++ +  D  FE+P  N P     A++              QD+S        +L     P +       I +S  +Y  +C++A++  K   +    T+K P+RS S+PS RA YNQ+IS Y       D S   D  ++F     DY I  W+  +P
Sbjct:   37 DVRLLKEQLPGLMVQVLGFGQ-DGWMEDFAERPNREREALVHLFGPSGSIF----------QSALAYCADCYFEYPLNNFPDNLQLAIERILVGGSSREGGTVQDVSELGEEPDPWLLSFCLPRVGGLVTSSITVSSAEYVVLCLVANAFWKPQPSQSMYTSKKPRRSSSLPSRRALYNQLISLYMTYFWPSDDSEPSDLGELFTRAVADYWI-GWMITNP 245          
The following BLAST results are available for this feature:
BLAST of Ggra8495.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IT960.000e+069.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4E96.740e-15341.60Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZQ509.370e-2424.77Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TDU41.900e-2125.70Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1TDQ03.390e-1427.60Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 474..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..381
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 633..636
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..611
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 612..632
NoneNo IPR availableTMHMMTMhelixcoord: 611..633

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:881113..883023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8495.t1Ggra8495.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 881113..883023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8495.t1 ID=Ggra8495.t1|Name=Ggra8495.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=637bp
MVGRYRGLRAELSTILAVDEYAQQPVQHDVPPPNESISAHLAHLITRATE
HPDEARTVYAYLPSIMLRIFGFAPGQGWLETCSELPSRDRDALVSIVLPD
GPLHTFCTKHTRPRSKSIDFVHDMRFEFPRRNLPSLTNHALDDQDLSPRT
SRSYLAPLLAPSMRNETDDVIFLSPLDYFFICMIASSTCKYVNAPGASTT
KIPKRSRSIPSIRAQYNQVISAYAVLRDPSAAVDNNDIFIPTCLDYLIIP
WVTASPTKLPYLSTSTADAIATLLLALPPSSPRDLDLSAESCNLATNRMM
NFRFVTNSGALYCFLPSMLDMIFSNYDSATPIFPLNAYIRVLSLMIAPWR
QSIRSTAAQMLLPKPKPNKGQQGNGSQPMTAWSSTLSSINAHLPSSTGSP
GNATSVKEAKWREELGQRHSKCDKALLRSAVILAASMHIASSADGVRVLS
LLTEAAQSARLYSVTVPEEDPDRMEELQLCLDALRDQKSQLQRKGGHRGR
NFIPILAANLGDKPSNGGVLRGISEIVGVGRGKVVSAVNGGSSSSTRRRL
KDFRDNWMGSAQDVDVPFIGNVWDRPISGNESEMLVLFAYWLAVKMEPRL
GFLPNIRFLGQYWVWGLIAFFCFLILVTKSVVASLT*
back to top