Ggra8493.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8493.t1
Unique NameGgra8493.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length181
Homology
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A2V3ITA8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITA8_9FLOR)

HSP 1 Score: 240 bits (613), Expect = 1.710e-78
Identity = 120/178 (67.42%), Postives = 142/178 (79.78%), Query Frame = 0
Query:    4 PPTKAQHFAELNAARREDGDLSPP-RMLVLVGIPGSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEILAAP 180
            P  +   F +L AA +ED   +PP RMLVLVGIPGSGKSTFAK L ++GWAR+SQD+LG R +CEV TV+HL  G NVVIDRCNF+KAQRK W D+A ARGSACGVIVFATSL +C++RVRNR  HPTL+GDQ    V+K +A+ F FPDRTEGFAFCRVIRSE D  RVL+E+L+AP
Sbjct:    6 PNNRTNDFVQLQAASKEDAPHTPPPRMLVLVGIPGSGKSTFAKQLCELGWARISQDDLGTRRKCEVLTVEHLCTGTNVVIDRCNFDKAQRKRWVDYASARGSACGVIVFATSLQDCLQRVRNRRGHPTLEGDQS-VGVIKRVAESFEFPDRTEGFAFCRVIRSETDATRVLSELLSAP 182          
BLAST of Ggra8493.t1 vs. uniprot
Match: R7Q7F6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7F6_CHOCR)

HSP 1 Score: 155 bits (393), Expect = 4.850e-44
Identity = 84/162 (51.85%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   17 ARREDGDLSPPRMLVLVGIP--GSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEI 176
            AR+    L+  R+L     P  GSGKSTFA  L+ +G+  + QDELGNR  CE  TV  L   +NVVIDRCNF+  QRKHW D+ +A G+  GVIVF TSL EC KRVR RT+H TL    +++ +V  M+ +FVFP+  EGF FCRV+RS  D  RV+ EI
Sbjct:   96 ARQARKRLARIRLLTTKCAPCAGSGKSTFASELNQLGFQVICQDELGNRIACERATVGALLAEKNVVIDRCNFDAKQRKHWVDYGRANGAEIGVIVFGTSLEECKKRVRERTNHKTLLPGVNNDAIVTGMSRKFVFPNEEEGFGFCRVVRSATDRARVMEEI 257          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A5J4YL06 (Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL06_PORPP)

HSP 1 Score: 145 bits (367), Expect = 1.430e-39
Identity = 78/161 (48.45%), Postives = 107/161 (66.46%), Query Frame = 0
Query:   17 ARREDGDLSPPRMLVLVGIPGSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLK-GDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEI 176
            A + DG+   PR+L++VGIPGSGKST A+ L   GW R+SQDELGNR RCEV+ ++ L  G+N VIDRCNF+  QR+ W   A++RG   G IV AT L +C+ RVR+R  HPTL   + + E+VV+  A +F  P   EG  F R +RS  D +++ +E+
Sbjct:  159 ADKPDGER--PRVLIMVGIPGSGKSTMAEMLVARGWKRISQDELGNRYRCEVELIRALLKGQNCVIDRCNFDVDQRRPWIRLARSRGCRVGAIVLATPLEQCIARVRSRESHPTLPPNNPNSEEVVRRFALQFEPPTSDEGIDFARHVRSNTDLDQLCSEM 317          
BLAST of Ggra8493.t1 vs. uniprot
Match: M2VYB2 (Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VYB2_GALSU)

HSP 1 Score: 142 bits (357), Expect = 3.770e-39
Identity = 73/151 (48.34%), Postives = 95/151 (62.91%), Query Frame = 0
Query:   27 PRMLVLVGIPGSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLKG-DQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEI 176
            P +L+L+GIPGSGK+TFAK L   GW RV QDEL  R +CE  T+ HL  G+++VIDRCN  K QR  W + AK   +  G +VF T +  C+ RV  R++HP LKG D   E V+   A EF  P   EG  FCR I++E DE R+L ++
Sbjct:   61 PILLMLIGIPGSGKTTFAKKLEAKGWCRVCQDELFTRQQCENYTITHLLQGKSIVIDRCNVTKEQRAIWINLAKNANAVVGCVVFTTPIHICISRVAQRSEHPNLKGNDPKTENVIFQFAREFCAPIAEEGIDFCRRIQTEQDEYRILQQL 211          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A7S0ZIR1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZIR1_9RHOD)

HSP 1 Score: 139 bits (351), Expect = 1.260e-38
Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = 0
Query:   28 RMLVLVGIPGSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEIL 177
            R+L++VGIPGSGKST ++     GW R++QDEL  R +CE    +  + GRN+V+DRCN  + QRK W D  K    + G IV A S+  CV R+++RTDH T+K   +   + K  A +   P   EG  FCR IR+E+D +RVLTE+L
Sbjct:   41 RVLLMVGIPGSGKSTVSRRFEQFGWTRINQDELKTRKKCEALFSEAYQNGRNIVVDRCNVTRDQRKPWLDKCKELDCSVGAIVMAVSIDTCVARMKSRTDHETIKPSSNLYAIAKNFASQMEVPSPEEGINFCRFIRTESDIDRVLTELL 190          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A7J7IME7 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IME7_9RHOD)

HSP 1 Score: 121 bits (304), Expect = 7.270e-30
Identity = 74/159 (46.54%), Postives = 97/159 (61.01%), Query Frame = 0
Query:   28 RMLVLVGIPGSGKSTFAKHLSDVG---WARVSQDELGNRGRCEVKTVQHLRI--GRNVVIDRCNFNKAQRKHWADFA-KARGSACGVIVFATSLGECVKRVRNR-TDHPTL--KGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEIL 177
            R+++L G+PGSGKSTFAK L + G   W R+SQDELG+R  CE    + L      +VVIDRCN +  QR  W   A +A     GV+VF+ S+ EC+ RV+ R  DHPTL    D D  +V+   A ++  P   EG AFCRVI+S  D ERVL E++
Sbjct:  209 RVILLCGLPGSGKSTFAKLLLERGGDAWQRISQDELGSRQECERLMQEALTTYPPHHVVIDRCNVDCGQRAFWIGAAARANAYPVGVVVFSVSMDECILRVQRRGPDHPTLVESSDSDIVKVITSFASKWQNPSAAEGIAFCRVIQSAEDVERVLAELV 367          
BLAST of Ggra8493.t1 vs. uniprot
Match: M1VES0 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VES0_CYAM1)

HSP 1 Score: 117 bits (292), Expect = 3.560e-28
Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 0
Query:   28 RMLVLVGIPGSGKSTFAKHLSDVG---WARVSQDELGNRGRCEVKTVQHLRIG--RNVVIDRCNFNKAQRKHW-ADFAKARGSACGVIVFATSLGECVKRVRNR-TDHPTL--KGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEIL 177
            R+++L GIPGSGKSTFAK +   G   W RVSQD+LG+R  CE    + L     R+V++DRCN + AQR  W A  A+A     GV+VF   L EC++RV  R  +HPTL    + D  +VV   A ++  P   EG  FCR++ S ADEERV+ E+L
Sbjct:  200 RVVLLCGIPGSGKSTFAKLVLKHGGENWVRVSQDDLGSRQECERMMQEALTSDPPRHVIVDRCNVDSAQRAVWIAIAAQANAYPVGVLVFPVPLDECIRRVLLRGPNHPTLFESTENDVVKVVTSFAGKWENPSPGEGIGFCRIVASPADEERVMAELL 358          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A1X6PDW0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PDW0_PORUM)

HSP 1 Score: 115 bits (288), Expect = 1.230e-27
Identity = 64/151 (42.38%), Postives = 92/151 (60.93%), Query Frame = 0
Query:   29 MLVLVGIPGSGKSTFAKHLSDVG-WARVSQDELG-NRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSLGECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEIL 177
            +L+LVG+PGSGK+TFA  L +VG W RVSQDE+G +R   E + ++ L  G  VV+DRCN    QR  + + A++ G++ G ++F + +  C+ RV  R  HPTL        VV+     F  P   EG AF RV+R+++D  RVL +IL
Sbjct:  203 VLLLVGLPGSGKTTFASRLVEVGGWVRVSQDEVGGSRQAVERQFLRALESGNAVVVDRCNCTVRQRSWFIENARSVGASVGTVLFVSPVSTCISRVNTRAYHPTLPPSSSVPGVVRAFLTTFEAPSAKEGVAFGRVVRTDSDTSRVLNDIL 353          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A2J7ZVC4 (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZVC4_9CHLO)

HSP 1 Score: 115 bits (287), Expect = 1.340e-26
Identity = 66/146 (45.21%), Postives = 86/146 (58.90%), Query Frame = 0
Query:   29 MLVLVGIPGSGKSTFAKHLSDVGWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSL----GECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEE 170
            +LVLVG+PGSGKS  ++ L   GWAR++QDELG+R  CE      L++ R+VV+DRCNF+  QR HW   A A  S  GV++ A  L      C +R R RTDHPTL     DE + +F +D FV   + EGF      RS  + E
Sbjct:    5 VLVLVGVPGSGKSFLSRRLEMRGWARINQDELGSRRACEDAYCSALQLRRHVVVDRCNFDVTQRSHWVRLAHAARSPSGVVLVALQLLVPLPLCKERARARTDHPTLGPHNCDEVIGRFASD-FVPASQREGFHRVLTARSSQEAE 149          
BLAST of Ggra8493.t1 vs. uniprot
Match: A0A835TAK2 (FCP1 homology domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TAK2_CHLIN)

HSP 1 Score: 111 bits (277), Expect = 4.140e-25
Identity = 70/156 (44.87%), Postives = 88/156 (56.41%), Query Frame = 0
Query:   29 MLVLVGIPGSGKSTFAKHLSDVG-WARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAKARGSACGVIVFATSL----GECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVFPDRTEGFAFCRVIRSEADEERVLTEILAA 179
            +LVLVG+PG+GKS  A+ L   G W  VSQDELG+R  CE +  + LR G NVV+DRCNF+  QR HW   A++ G    + V A  L      C +R R RTDHPTL     DE + +F AD FV     EGF      R+  + E  + E LAA
Sbjct:    2 LLVLVGVPGAGKSYLARRLVARGTWVHVSQDELGSRRACEEECARALRQGWNVVVDRCNFDVQQRSHWVQIARSCGVGPALQVVAVQLLLPLDVCRERARRRTDHPTLGPHNCDEVIARFAAD-FVHAGPAEGFHRVLTARTSPEAEAQV-EALAA 155          
The following BLAST results are available for this feature:
BLAST of Ggra8493.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITA81.710e-7867.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7F64.850e-4451.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YL061.430e-3948.45Bifunctional polynucleotide phosphatase/kinase n=1... [more]
M2VYB23.770e-3948.34Bifunctional polynucleotide phosphatase/kinase n=1... [more]
A0A7S0ZIR11.260e-3845.33Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7J7IME77.270e-3046.54Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VES03.560e-2845.91Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A1X6PDW01.230e-2742.38Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2J7ZVC41.340e-2645.21Uncharacterized protein n=1 Tax=Tetrabaena sociali... [more]
A0A835TAK24.140e-2544.87FCP1 homology domain-containing protein n=1 Tax=Ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13671AAA_33coord: 71..130
e-value: 1.6E-7
score: 31.6
NoneNo IPR availablePANTHERPTHR12083BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASEcoord: 15..168
NoneNo IPR availablePANTHERPTHR12083:SF20POLYNUCLEOTIDE KINASE 3-PHOSPHATASE, EUKARYOTAcoord: 15..168
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..176
e-value: 9.4E-39
score: 135.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:878766..879478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8493.t1Ggra8493.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 878766..879478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8493.t1 ID=Ggra8493.t1|Name=Ggra8493.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=181bp
MTEPPTKAQHFAELNAARREDGDLSPPRMLVLVGIPGSGKSTFAKHLSDV
GWARVSQDELGNRGRCEVKTVQHLRIGRNVVIDRCNFNKAQRKHWADFAK
ARGSACGVIVFATSLGECVKRVRNRTDHPTLKGDQDDEQVVKFMADEFVF
PDRTEGFAFCRVIRSEADEERVLTEILAAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase