Ggra8455.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8455.t1
Unique NameGgra8455.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length280
Homology
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A2V3II56 (Enoyl-CoA delta isomerase 2, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II56_9FLOR)

HSP 1 Score: 192 bits (487), Expect = 1.060e-56
Identity = 105/239 (43.93%), Postives = 147/239 (61.51%), Query Frame = 0
Query:   29 LLQRRHGQHVVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGD------VLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSL 261
            LL+ R+   V +L  NRP+RLNA N +L+     AL  LS    TR++++T AG ++FC+GMD+    +   +     AAR FM AL RCRK++VAA FG+V G+GVTLL+HCD VYC   +TF TPF ++ + PEFASS+      GKQL+   LLRGE + A  M DAG+C +V+G       V    LQ C++W +EA D QW +V  AK L+K   +  ++ A+  EF+ I + L
Sbjct:    9 LLEARYSNQVTQLTLNRPNRLNAFNESLYLATTDALERLSIDNDTRIILITGAG-KTFCAGMDIIEASEKEQSLRTVTAARQFMQALTRCRKIVVAAVFGQVTGIGVTLLMHCDVVYCSESTTFQTPFCQVGIAPEFASSVLFPTMLGKQLSNEFLLRGEVISAYKMADAGICRIVEGSNGDVDKVFQTALQDCVRWSKEASDEQWASVLAAKKLMKMGVMGSVDSAIEREFKQIYEDL 246          
BLAST of Ggra8455.t1 vs. uniprot
Match: R7QJD0 (Enoyl-CoA hydratase/isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJD0_CHOCR)

HSP 1 Score: 172 bits (436), Expect = 5.180e-49
Identity = 109/263 (41.44%), Postives = 155/263 (58.94%), Query Frame = 0
Query:   29 LLQRRHGQHVVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRC----LKWVREADDAQ-WNAVCDAKALIKQPTV----QLIEGAMRSEFELIEQ---SLLKQDTVARFGAALRSAKL 279
            LL+  HG  VV+L  NRP  LNA + AL+   AAALR  +  A+TR++VLT AG R+FC+GMD++ +   A A+   RAARAFM AL+ C K +VAA FG V G+GVTLL+HCD V+  + +TF TPF+ + + PEF SSLT  L  G QL + +L+RG RV    +   G  ++V       V++R     L W R     + W  V +AK L+K+  +    Q I+  M++ +E ++    S L +  VA  G   R++KL
Sbjct:    9 LLEESHGDGVVQLTLNRPAALNAFSEALYYATAAALRRHNDLASTRILVLTGAGTRTFCAGMDIKEVCSRAQAQLTVRAARAFMDALLECSKPVVAAVFGAVTGIGVTLLMHCDAVFAASDATFETPFSAIGIVPEFGSSLTFPLLLGLQLTSDLLMRGVRVGVGELERVGALKVVASQERDVVVRRAVDEALDWSRRNPSVEEWRGVLEAKRLVKEQVIKDTSQAIDKEMKAIYERVDDGTASKLMRKRVAELGR--RTSKL 269          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A495RBW6 (Enoyl-CoA hydratase/carnithine racemase n=2 Tax=Sphingosinicella microcystinivorans TaxID=335406 RepID=A0A495RBW6_SPHMI)

HSP 1 Score: 119 bits (298), Expect = 1.150e-28
Identity = 88/241 (36.51%), Postives = 117/241 (48.55%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAALRSAK 278
            V+ LR NRP   NAL  A++     +++A     ATR V++TA+G  +FC+G D              R    FM AL  C K L+AA  G  VG+G T+LLH D VYC   + FH PF RL L PEFASS  L    G   AAR LL GE + A   RD G+   +  D L     R       A  A     C  +AL++ P  Q +   M +E + + + +   +T  R  A L+S K
Sbjct:   20 VIHLRLNRPEARNALTPAMYDEMRRSIKAAVEDRATRAVLVTASGP-AFCAGNDAAGFDLVRRLPKHERPGYRFMQALTECSKPLIAAVSGNAVGIGATMLLHFDLVYCTPDARFHFPFTRLGLVPEFASSYFLPRMAGHARAARWLLLGEPMSASEARDIGLVSAIVSDDLVEADARSAAERLAALPASSVDAC--RALMRSPKRQCVAEIMAAEMDQLSELISSDETRVRL-AGLKSRK 256          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A1Y6BJR5 (Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Alteromonadaceae bacterium Bs31 TaxID=1304903 RepID=A0A1Y6BJR5_9ALTE)

HSP 1 Score: 111 bits (277), Expect = 1.500e-25
Identity = 84/225 (37.33%), Postives = 115/225 (51.11%), Query Frame = 0
Query:   41 LRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAAR----AFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSL 261
            +  NRP + NAL+ A++ R  A L    + AA RVVVL       F SG D+              + +    AFM AL RC K +VA   G  VG+G TLLLHCD VYC A+++F  PF  L L PE+ASSL +    G   AA  L+ GE + A      G+   V  D+     Q+  + VR+A +A    VC  K L+K  T  L+E +M +E E  +++L
Sbjct:   18 IHLNRPEKKNALSLAMYERMTALLGEAESDAAIRVVVLQGVSG-CFTSGNDLADFAQLVSRPEQLDSPQNPILAFMNALARCSKPIVALVDGVAVGIGTTLLLHCDLVYCSAQASFSLPFVNLGLCPEYASSLLIPRLAGHVKAAEWLMLGETISAEEAGRFGLVNAVVNDLDTYSQQKIQRLVRQAPEAV--RVC--KRLLKAETKVLVEQSMTTEIEDFKKAL 237          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A8I1QXI5 (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Bosea sp. TaxID=1871050 RepID=A0A8I1QXI5_9HYPH)

HSP 1 Score: 110 bits (274), Expect = 3.010e-25
Identity = 81/238 (34.03%), Postives = 116/238 (48.74%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAALR 275
            V ++  NRP R NAL+ A +     A+ A  A  + R V+LT AG   F SG D++    AA A    R A  F+ A+   RK +VAA  G  VG+G T+LLHCD  +  A ++F  PF  L L PE  SS  L L  G + AA +L+ GE   A    +AG+   V  +  G  L+  L   +        +V   K L+K+ T + +   +  E +   Q L   + +A F A L+
Sbjct:   14 VAQITMNRPERRNALDRASYAGLIEAITAAEADESIRAVLLTGAG-NCFTSGNDIKDFAAAAAAGEGPRVAIDFLNAIATARKPIVAAVEGFAVGIGTTMLLHCDLAFAGATASFRLPFVTLGLSPEGGSSYLLPLVAGGKKAAELLMLGEAFDAATATEAGLLNAVVSE--GTALEHGLARAKALAALPPQSVALTKMLLKRGTAEAVAETIAIEADHFGQRLRSTEAMAAFAAFLK 248          
BLAST of Ggra8455.t1 vs. uniprot
Match: enoyl-CoA hydratase-related protein n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI00164824EC (enoyl-CoA hydratase-related protein n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI00164824EC)

HSP 1 Score: 108 bits (270), Expect = 1.120e-24
Identity = 84/246 (34.15%), Postives = 119/246 (48.37%), Query Frame = 0
Query:   29 LLQRRHGQHVVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAAL 274
            +L     + V ++  +RP R NAL+ A ++    AL A  A AA RV+VLT AG   F SG D++    AAG     R A  F+ A+   RK +VAA  G  VG+G T+LLHCD  Y    ++F  PF  L L PE  SS  L L  G + AA +L+ GE       R+AG+   V  +  G  L   L+  R        +V   K+L+K+     +   + +E     + L+  +  A F A L
Sbjct:    5 VLSETPAEGVRQITMSRPERRNALDRATYQGLIDALAAADADAAVRVIVLTGAGG-CFTSGNDIKDF--AAGGLDGPRVAIDFLTAISTARKPIVAAVEGFAVGIGTTMLLHCDLAYAGRGASFRLPFVTLGLCPEGGSSYLLPLIAGSKRAAELLMLGEPFGPEQAREAGLVNDVTAE--GGALAAALEKARALAALPPQSVALTKSLLKRGGAAAVAETIATEARHFGERLMSAEAQAAFAAFL 245          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A1H5ZB42 (Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Bosea lathyri TaxID=1036778 RepID=A0A1H5ZB42_9HYPH)

HSP 1 Score: 108 bits (269), Expect = 1.540e-24
Identity = 81/238 (34.03%), Postives = 116/238 (48.74%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAALR 275
            + ++  NRP R NAL+ A +    AA+ A  A  A RV+VLT A    F SG D+R    AAG     R A  F+ A+   +K ++AA  G  VG+G T+LLHCD  Y    + F  PF  L L PE ASS  L L  G + AA +L+ GE   A    +AG+   +  +  GA L + L   R        +V   K L+K+    ++   + +E     + L   + +A F A L+
Sbjct:   14 ISQITMNRPERRNALDRASYAGLIAAIAAAEADEAIRVMVLTGASG-CFTSGNDIRDFAAAAGD--GPRIAMDFLTAISTAKKPIIAAVEGFAVGIGTTMLLHCDLAYAGRSANFRMPFVALGLSPEGASSYLLPLIAGSKRAAELLMLGEAFGADAAAEAGLLNEIVEE--GAALAKALDKARALAALPPQSVALTKMLLKRGGAAIVTETIATEARHFAERLQSAEAMAAFAAFLK 246          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A0Q9I3W5 (Enoyl-CoA hydratase n=1 Tax=Bosea sp. Root381 TaxID=1736524 RepID=A0A0Q9I3W5_9HYPH)

HSP 1 Score: 108 bits (269), Expect = 1.540e-24
Identity = 83/240 (34.58%), Postives = 115/240 (47.92%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCE--LVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAALR 275
            V ++  NRP R NAL+ A +R   AA  A  A A TR +V+T  G   F SG D+R    A  A    R A  F+  +    K +VAA  G  VG+G T+LLHCD  Y    STF  PFA L L PE ASS  L L  G + A+ +L+  E   +   R+AG+    + QG  LG  L +     +        ++   K L+K+     I  A+ +E    ++ L   +  A F A L+
Sbjct:   14 VTQITMNRPERKNALDQASYRGLIAAFAAAEADAQTRAIVVTGTGG-CFTSGNDIRDF--ATSALEGARVAMDFLTTISTATKPIVAAVEGFAVGIGTTMLLHCDLAYAGEGSTFRMPFAALGLCPEGASSYLLPLAAGSKRASELLMLAEAFGSEIAREAGLLNGVVAQGAALGTALDKA----KALAALPPQSIALTKQLLKRGQAAAIADAIATEARHFDERLRSDEAQAAFAAFLK 246          
BLAST of Ggra8455.t1 vs. uniprot
Match: A0A2S8BN88 (2,3-dehydroadipyl-CoA hydratase n=2 Tax=Mycobacterium talmoniae TaxID=1858794 RepID=A0A2S8BN88_9MYCO)

HSP 1 Score: 107 bits (268), Expect = 1.720e-24
Identity = 93/226 (41.15%), Postives = 120/226 (53.10%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDA-KALIKQPTVQLIEGAMRSEFELIEQSLL 262
            VV +R NRP + NA+ AA++   A AL A  A AA  VVVLT AG  +F +G D++ + D           R F+ AL   R VLVAA  G  +GVG T+LLHCDFVY  ARSTF  PF  L L PE AS+L L    G Q AA ++L GER  A    + G+   V  D  G  L + L     A  A+  A   A KAL+   T + +   +  +  ++ QSLL
Sbjct:    7 VVTIRLNRPDKRNAITAAMYTALADALIAAEASAAA-VVVLTGAGG-AFTAGNDLQDMRDNPPVGDNPPPVR-FLAALTGLRAVLVAAVDGPAIGVGTTVLLHCDFVYATARSTFRLPFVDLGLVPEAASTLLLPRLVGHQRAAELMLFGERFDAATAANVGIVTAVVAD--GTALDQLLAERTAALVAKPRAALRATKALLVDSTARTVPARLVLDRRVL-QSLL 226          
BLAST of Ggra8455.t1 vs. uniprot
Match: enoyl-CoA hydratase n=1 Tax=Teredinibacter purpureus TaxID=2731756 RepID=UPI0005F86B57 (enoyl-CoA hydratase n=1 Tax=Teredinibacter purpureus TaxID=2731756 RepID=UPI0005F86B57)

HSP 1 Score: 107 bits (268), Expect = 2.730e-24
Identity = 87/244 (35.66%), Postives = 120/244 (49.18%), Query Frame = 0
Query:   38 VVELRFNRPHRLNALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGD-------AAGARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARSTFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGVCELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAMRSEFELIEQSLLKQDTVARFGAAL 274
            V+ +  NR ++ NALN A+++  A  L A + + A RVV++T      FCSG D+    +        AG+   T A   FMLAL +C K +VAA  G  VG+G T+LLHCD VYC   + F  PF  L L PE+ASS  L    G   AA  +L GE   A     AG+   V  D L    + C K   +A      AV +AKAL+K    + +   + +E +    SL   +    FG A+
Sbjct:   13 VLMITLNRVNKKNALNQAMYQALAETLNAAADNQAVRVVLITGV-EDCFCSGNDLADFANFMSEPEKLAGSENPTLA---FMLALEKCPKPVVAAVSGPAVGIGTTMLLHCDLVYCAENTAFSLPFVNLGLRPEYASSYLLPRLAGHARAAEWILLGEPFGAEAAYQAGLVNGVVDDPLLKAREVCHKLAAQAP----IAVREAKALLKLSGRKAVSDTLNTELQSFVASLSSPE----FGEAV 244          
The following BLAST results are available for this feature:
BLAST of Ggra8455.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II561.060e-5643.93Enoyl-CoA delta isomerase 2, mitochondrial n=1 Tax... [more]
R7QJD05.180e-4941.44Enoyl-CoA hydratase/isomerase n=1 Tax=Chondrus cri... [more]
A0A495RBW61.150e-2836.51Enoyl-CoA hydratase/carnithine racemase n=2 Tax=Sp... [more]
A0A1Y6BJR51.500e-2537.33Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Al... [more]
A0A8I1QXI53.010e-2534.03Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
enoyl-CoA hydratase-related protein n=1 Tax=Bosea sp. CS1GBMeth4 TaxID=1892849 RepID=UPI00164824EC1.120e-2434.15enoyl-CoA hydratase-related protein n=1 Tax=Bosea ... [more]
A0A1H5ZB421.540e-2434.03Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Bo... [more]
A0A0Q9I3W51.540e-2434.58Enoyl-CoA hydratase n=1 Tax=Bosea sp. Root381 TaxI... [more]
A0A2S8BN881.720e-2441.152,3-dehydroadipyl-CoA hydratase n=2 Tax=Mycobacter... [more]
enoyl-CoA hydratase n=1 Tax=Teredinibacter purpureus TaxID=2731756 RepID=UPI0005F86B572.730e-2435.66enoyl-CoA hydratase n=1 Tax=Teredinibacter purpure... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.226.10coord: 28..274
e-value: 1.5E-44
score: 154.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR43684FAMILY NOT NAMEDcoord: 28..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..279
NoneNo IPR availableCDDcd06558crotonase-likecoord: 28..222
e-value: 6.93551E-33
score: 117.276
IPR001753Enoyl-CoA hydratase/isomerasePFAMPF00378ECH_1coord: 36..226
e-value: 6.1E-29
score: 101.1
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 29..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:767573..768412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8455.t1Ggra8455.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 767573..768412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8455.t1 ID=Ggra8455.t1|Name=Ggra8455.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=280bp
MARAEQRADEDGDDEPDIVEEGDDEPDILLQRRHGQHVVELRFNRPHRLN
ALNAALFRRAAAALRALSAHAATRVVVLTAAGARSFCSGMDVRAIGDAAG
ARAATRAARAFMLALMRCRKVLVAAAFGRVVGVGVTLLLHCDFVYCDARS
TFHTPFARLALPPEFASSLTLRLFGGKQLAARMLLRGERVRARHMRDAGV
CELVQGDVLGAVLQRCLKWVREADDAQWNAVCDAKALIKQPTVQLIEGAM
RSEFELIEQSLLKQDTVARFGAALRSAKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001753Enoyl-CoA_hydra/iso
IPR029045ClpP/crotonase-like_dom_sf