Ggra8452.t3 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8452.t3
Unique Name	Ggra8452.t3
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	239

Homology

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BLAST of Ggra8452.t3 vs. uniprot
Match: A0A2V3II65 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II65_9FLOR)

HSP 1 Score: 254 bits (649), Expect = 2.410e-75
Identity = 161/265 (60.75%), Postives = 201/265 (75.85%), Query Frame = 0

Query:    1 LADRTANFAKVEAELNDARSTYIEAADNFETQRAALTKRLAAAQREKLELKSILAAMNCSSEQ---------------DSENCTQRLG-------DRS---RSTSSDEDGTCNSLRSDACSMTSALTATSAASDDTLG--HRVQQLQGLLQEETRVKEDKSKRLHEAEVSLKEMCAEMERMKVLAKEKEREAEGMRSEMKSIHSRMRKMAHVSMPRDYEKWLEDDDEDMERLQQVREASRKERDVDRRSKGRRKSKGLALENKGR 238
            LA+RTANFA++EAELNDAR TYIEAA+NFE QRAAL K+L  +QREK ++  +L AM+ S+E+               + EN   RL        +R+   RS + +ED   +S RSD+CS+TS+LT +SA S++ LG   RVQQLQ  L EETRV+EDK+KRL EAE  L++M  +ME++K +AK+KEREA+G+R+EMKSIHSRMRKMAHVSMPRDYEKWLE DDED+ERLQQVREA+RKER+VDRRSKGRRKSKG+  ENKGR
Sbjct:  662 LAERTANFAELEAELNDARKTYIEAANNFEAQRAALEKQLGVSQREKEQVNDLLVAMSGSNEEGDKRLEQAMKRCEQLEQENDGLRLSVGESRQVNRNVHLRSMTREEDS--SSFRSDSCSVTSSLTTSSAGSEEGLGLSRRVQQLQSRLDEETRVREDKAKRLREAEQRLRDMRGDMEKLKNVAKDKEREADGLRNEMKSIHSRMRKMAHVSMPRDYEKWLEGDDEDLERLQQVREATRKEREVDRRSKGRRKSKGVMFENKGR 924

The following BLAST results are available for this feature:

BLAST of Ggra8452.t3 vs. uniprot

BLAST of Ggra8452.t3 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3II65	2.410e-75	60.75	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 144..178
None	No IPR available	COILS	Coil	Coil	coord: 195..215
None	No IPR available	COILS	Coil	Coil	coord: 26..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000041_pilon	contig	tig00000041_pilon:764397..765113 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8452.t3	Ggra8452.t3	Gracilaria gracilis GNS1m male	mRNA	tig00000041_pilon 764397..765113 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8452.t3 ID=Ggra8452.t3|Name=Ggra8452.t3|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=239bp
LADRTANFAKVEAELNDARSTYIEAADNFETQRAALTKRLAAAQREKLEL
KSILAAMNCSSEQDSENCTQRLGDRSRSTSSDEDGTCNSLRSDACSMTSA
LTATSAASDDTLGHRVQQLQGLLQEETRVKEDKSKRLHEAEVSLKEMCAE
MERMKVLAKEKEREAEGMRSEMKSIHSRMRKMAHVSMPRDYEKWLEDDDE
DMERLQQVREASRKERDVDRRSKGRRKSKGLALENKGR*