Ggra8449.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8449.t1
Unique NameGgra8449.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length318
Homology
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BLAST of Ggra8449.t1 vs. uniprot
Match: A0A2V3II30 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II30_9FLOR)

HSP 1 Score: 417 bits (1071), Expect = 4.160e-144
Identity = 205/296 (69.26%), Postives = 239/296 (80.74%), Query Frame = 0 
Query:   23 MRRVPRVSISNVLLALPVLLLFGFALHVNDGHYFRALTAVEPPP----HERVHRPIFYLKMHKTASTTISKALERYARRHGLSISRASGRKYITKPNPSRSRYDVIALQHMPYNLEVLDTFLNDRPNLVLSSIRHPTDRAVSWFRQQITQFERVSQRDCPKKESNILAQFDKFVDKGRLQASQFFQLQERTARLALHPKTMNLTQIVSQFDFIFLQERLKDSFECFCKTHNVHLCDDQHPVRRENAKRKRSCVEHVLMQHRPNVLTKGYEQDLQVLEWVRDKLDQCVKDIPAYCRC 314
            MRR+ RV IS VL+ L +L L  FA  + +    R  +           ERVHRPIFYLKMHKTASTTIS+AL+ YA RHGLSIS ASG +YI +PNP+ +RYD+IALQHM +N E+LDTFL +RPNL+L+SIRHPTDRAVSWFRQQI +FER+S RDC KKE  IL +FDKFVD+GRLQASQFFQ+QERTARLALHP+ MNLTQIV QF FIFLQERL DSFECFCK H V LCD  +PV+ ENAK+ R CV+H+LMQHRPNVLTKGYEQD+QV+ WVR++LDQCVKDIP +CRC
Sbjct:    1 MRRIGRVPISTVLMLLLILSLLVFAYQLRNSDAIRPASXXXXXXXXXXEERVHRPIFYLKMHKTASTTISRALKLYAGRHGLSISTASGLRYIIEPNPTSNRYDIIALQHMAFNFEILDTFLTERPNLILTSIRHPTDRAVSWFRQQIPKFERISDRDCQKKEKQILDEFDKFVDQGRLQASQFFQMQERTARLALHPRKMNLTQIVDQFHFIFLQERLTDSFECFCKQHGVFLCDANNPVKYENAKKSRGCVQHMLMQHRPNVLTKGYEQDVQVMNWVREQLDQCVKDIPEHCRC 296
The following BLAST results are available for this feature:
BLAST of Ggra8449.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3II304.160e-14469.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009729Galactose-3-O-sulfotransferasePFAMPF06990Gal-3-0_sulfotrcoord: 19..206
e-value: 2.3E-7
score: 30.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 70..310
e-value: 6.3E-16
score: 60.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..50
NoneNo IPR availableTMHMMTMhelixcoord: 29..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:748310..749263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8449.t1Ggra8449.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 748310..749263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8449.t1 ID=Ggra8449.t1|Name=Ggra8449.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=318bp
MRYVAAPPAAPRASVSAAMLCAMRRVPRVSISNVLLALPVLLLFGFALHV
NDGHYFRALTAVEPPPHERVHRPIFYLKMHKTASTTISKALERYARRHGL
SISRASGRKYITKPNPSRSRYDVIALQHMPYNLEVLDTFLNDRPNLVLSS
IRHPTDRAVSWFRQQITQFERVSQRDCPKKESNILAQFDKFVDKGRLQAS
QFFQLQERTARLALHPKTMNLTQIVSQFDFIFLQERLKDSFECFCKTHNV
HLCDDQHPVRRENAKRKRSCVEHVLMQHRPNVLTKGYEQDLQVLEWVRDK
LDQCVKDIPAYCRCDTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009729Gal-3-0_sulfotransfrase
IPR027417P-loop_NTPase