Ggra8438.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8438.t1
Unique NameGgra8438.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length773
Homology
BLAST of Ggra8438.t1 vs. uniprot
Match: A0A2V3II26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II26_9FLOR)

HSP 1 Score: 738 bits (1904), Expect = 1.680e-256
Identity = 417/778 (53.60%), Postives = 538/778 (69.15%), Query Frame = 0
Query:    1 MAPRRKPASTRPSHKQSSISDFFARKGDTSSQTTASQLSDAPRAAIRRARRKTARLHAAVAVKREALPRNVKRITADTAAVQDVFKSQSLFKSTAKQAATKQSTPTSVMQLQSRRKSTRAHAFMEEEEHTVIQAMDID-KSPPPLTKEELLVEEAFRSLECSQDVPDADXXXXXXXXXXXXXXLKSPLDATSLSEASQSSSEDSDAELAKLENISATRRSARASNPVRRFDPSHVREASVFGSGPIRSRGAGDIIRNPETYLARLLSNRNVRERKEDELKQMREDIEKPTQAQQDEELFASMAKSEQEAEEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDDRD--TMGDLHEMVVDVVEAGEKGDRALSILLPTLAAKPY-PDVRIPAVVYRMVYYLAVFDSTSPDSRRRSRDKLVDVLVSMVGHELPSFKSEQIKLPTLMNTLHKYGATMKDWSRQELVDEVASHEESLDRQIPTREKSQVSDDFKRALRNLKRVCRMTAGFVRLGIPLTRAIGVKSGTTEKEVLCSLGLMVRILLSAFGNRLYAEVGEIITELVSVIPDSDWPRFRLEAAKYLLSITSRFELHIELVAHLIPQNFERPRYLALDLAFLSFAQWCRGPSKDPVPQRAIDYQASGKAKAVGLKTRSYCLADIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPALFQKRDPAELSDLDNAVKMLRSCAQRLAFDVSSTHMKVELDMLLVTYRAYGATSRESMAAILPNVRPEKKQETL--SFAKKT 772
            MAPRRKP +                 G    Q+     S+  R A+RR RR + R   +    +E LPRNVKRI A TA +     S++ FK +   AA++ S    +        S+   +   E +H   Q MDI+  S  PLTKEEL +EE  RSLECSQDVP+                 K+  DATS S+  +SSSEDSD ELAK E +  TRRSAR SNPV+RFDPS   +ASVFG+  +RSRG  D++RNPE YLA+L+  ++ RERKEDEL+QMR+D++KPTQ  +DEE+FA+MAK+EQEAEE RLAA+ KYSAP+PLF   FTI QMP KYLV+GG+ +++++   T+   H+M+VD+VEAGE+GDRALS+L+P L  K Y P VR+  VV+RMVY  AV+D T P   RRSRD LVD L+ MV +EL +F   +IKLPTLMNTL KYGA M DW + ++V  V+   E LD QIPT E+ Q  D+FK ALRNL+R C++ A F++LG+P+ RAIGVKS    ++VL S+GL+ R+LLSAFGNRLY EVGEIITE++  IP++ WP +RL  AKY+LSIT R ELH+ELVA+LIP   ER RYLALD +FLS++QWCRGP  +P P+   D+Q S +AK VG+K RSYCLAD+V+LL+ +PEIDK T+C WAWL+SYQLRL+LSEP +++KRD  ELS L+  V+ LR+C  R+AFDV    M++ELD L+ T+RA+G  SR+ MA ILPN+R EKKQETL   FA+KT
Sbjct:    1 MAPRRKPPAP----------------GTQKQQSPNRSQSNGQRRAVRRPRRNSVRSSISPPATQENLPRNVKRIVAGTAPIPP--SSRTRFKFSTDAAASRTSARNKLC-------SSDESSPESEPKHEAQQLMDIEPNSTVPLTKEELELEEGIRSLECSQDVPEE----------------KTARDATSCSDTGESSSEDSDEELAKFEQMRTTRRSARTSNPVQRFDPSDAPKASVFGTEQLRSRGRADVVRNPELYLAKLVREQSARERKEDELQQMRDDLQKPTQVHKDEEMFATMAKAEQEAEERRLAALDKYSAPIPLFCKPFTIPQMPAKYLVKGGSNRDENQPYKTLHTAHDMLVDIVEAGEQGDRALSVLVPILKEKRYYPVVRLHHVVFRMVYIHAVYDRTLPKPGRRSRDALVDALIHMVENELDTFIRVKIKLPTLMNTLFKYGAAMPDWLKPKVVGNVSLEVECLDSQIPTAEEPQPPDNFKIALRNLRRACKLAAAFIKLGLPIERAIGVKSVPLGQQVLLSIGLVTRLLLSAFGNRLYVEVGEIITEVLKRIPEAIWPAYRLRLAKYMLSITPRLELHVELVANLIPFTSERTRYLALDYSFLSYSQWCRGPGSNPQPRSVDDFQPSERAKTVGIKVRSYCLADVVDLLRQMPEIDKETDCIWAWLISYQLRLILSEPGVYKKRDSGELSALNQLVQKLRTCTNRMAFDVPVQDMRIELDTLVKTFRAFGCASRDGMAEILPNLRAEKKQETLVSMFAEKT 737          
BLAST of Ggra8438.t1 vs. uniprot
Match: R7QJS0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJS0_CHOCR)

HSP 1 Score: 203 bits (516), Expect = 6.070e-56
Identity = 113/275 (41.09%), Postives = 160/275 (58.18%), Query Frame = 0
Query:  494 RALRNLKRVCRMTAGFVRLGIPLTRAIGVK--SGTTEKEVLCSLGLMVRILLSAFGNRLYAEVGEIITELVSVIPDSDWPRFRLEAAKYLLSITSRFELHIELVAHLIPQNFERPRYLALDLAFLSFAQWCRGPSKDPVPQRAIDYQASGKAKAVGLKTRSYCLADIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPALFQKRDPAELSDLDNAVKMLRSCAQRLAFDVSSTHMKVELDMLLVTYRAYGATSRESMAAILPNVRPEKKQETL 766
            +A RNLKR     A  VRL   L R I  K      EK +L +LG+ VR+LLS FG RL  EVG ++  ++S + +  W  FR  AAKY+LSIT+R  LH+ELVAHL+P + +R R LALD+ FLS  QW  GP   P  +    ++ S  AKA G+   S+CLAD+ +L K +P+  K TN  WA  ++  L+ +L++    ++RD  EL+ +  ++  LRSCA RL F ++   M++ LD LL+  R     +R  ++ I P  R EK Q  L
Sbjct:   15 KATRNLKRAFIYAASRVRLNDKLHRIISRKIYKQDREKSILYTLGVCVRVLLSVFGARLATEVGYLVAAVLSRVNEKHWASFRRTAAKYILSITTRLGLHVELVAHLLPYHTDRARSLALDVGFLSLMQWSCGPGDSPKTREIHAWEPSSSAKAAGVGVISFCLADLADLAKHIPDFQKTTNVEWACGIARMLKQILADQTTLERRDNGELNAIHQSLTKLRSCAHRLEFGLAVQEMRLALDALLLALRELVGKTRSGISEISPKARFEKVQTHL 289          
BLAST of Ggra8438.t1 vs. uniprot
Match: A0A2V3IUI6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUI6_9FLOR)

HSP 1 Score: 151 bits (382), Expect = 1.200e-38
Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 0
Query:  281 MREDIEKPTQAQQDEELFASMAKSEQEAEEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDDRD--TMGDLHEMVVDVVEAGEKGDRALSILLPTLAAKPY-PDVRIPAVVYRMVYYLAVFDSTSPDSRRRSRDKLVDVLVSMVGHELPSFKSEQIKLPTLMNTLHKYGATMKD 459
            MR D++KPTQ  ++EE+FA+M K+EQ A+E  LAA+ KYSAP+PL    FTI QMP KYL+RGG+ ++D++   T    H+M+    +AGE+GD ALS+L+P L  K Y P VR   VV+ M     V+D T P+S  RSRD  VD  +  V + L S    +IKL +LMN L KYGA+M +
Sbjct:    1 MRHDLQKPTQVHKEEEMFATMPKAEQVAKERLLAALHKYSAPIPLLCKPFTIPQMPSKYLLRGGSYRDDNQPYKTPHAAHDMLAYKFKAGEQGDHALSVLIPILREKRYYPVVRFHHVVFCMASIHPVYDRTLPESGSRSRDAFVDAPIHTVENGLDSLIGVRIKLLSLMNILCKYGASMPE 182          
BLAST of Ggra8438.t1 vs. uniprot
Match: A0A2V3IUH8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH8_9FLOR)

HSP 1 Score: 62.0 bits (149), Expect = 1.460e-8
Identity = 33/66 (50.00%), Postives = 43/66 (65.15%), Query Frame = 0
Query:  709 VKMLRSCAQRLAFDVSSTHMKVELDMLLVTYRAYGATSRESMAAILPNVRPEKKQETLS--FAKKT 772
            ++ LR C     FDV    M++ELD L  T+RA    SR+ MA ILPN+R EKKQ+T++  FAKKT
Sbjct:    1 MQKLRKCTDCTEFDVRVHRMRIELDTLAKTFRASECASRDGMAKILPNIREEKKQDTITSMFAKKT 66          
The following BLAST results are available for this feature:
BLAST of Ggra8438.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3II261.680e-25653.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJS06.070e-5641.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IUI61.200e-3848.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUH81.460e-850.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:713905..716281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8438.t1Ggra8438.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 713905..716281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8438.t1 ID=Ggra8438.t1|Name=Ggra8438.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=773bp
MAPRRKPASTRPSHKQSSISDFFARKGDTSSQTTASQLSDAPRAAIRRAR
RKTARLHAAVAVKREALPRNVKRITADTAAVQDVFKSQSLFKSTAKQAAT
KQSTPTSVMQLQSRRKSTRAHAFMEEEEHTVIQAMDIDKSPPPLTKEELL
VEEAFRSLECSQDVPDADADADADAQAEPQSQLKSPLDATSLSEASQSSS
EDSDAELAKLENISATRRSARASNPVRRFDPSHVREASVFGSGPIRSRGA
GDIIRNPETYLARLLSNRNVRERKEDELKQMREDIEKPTQAQQDEELFAS
MAKSEQEAEEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDD
RDTMGDLHEMVVDVVEAGEKGDRALSILLPTLAAKPYPDVRIPAVVYRMV
YYLAVFDSTSPDSRRRSRDKLVDVLVSMVGHELPSFKSEQIKLPTLMNTL
HKYGATMKDWSRQELVDEVASHEESLDRQIPTREKSQVSDDFKRALRNLK
RVCRMTAGFVRLGIPLTRAIGVKSGTTEKEVLCSLGLMVRILLSAFGNRL
YAEVGEIITELVSVIPDSDWPRFRLEAAKYLLSITSRFELHIELVAHLIP
QNFERPRYLALDLAFLSFAQWCRGPSKDPVPQRAIDYQASGKAKAVGLKT
RSYCLADIVELLKFLPEIDKNTNCTWAWLLSYQLRLVLSEPALFQKRDPA
ELSDLDNAVKMLRSCAQRLAFDVSSTHMKVELDMLLVTYRAYGATSRESM
AAILPNVRPEKKQETLSFAKKT*
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