Ggra8404.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8404.t1
Unique NameGgra8404.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length761
Homology
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A2V3IKK5 (BRCT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKK5_9FLOR)

HSP 1 Score: 917 bits (2371), Expect = 0.000e+0
Identity = 468/708 (66.10%), Postives = 564/708 (79.66%), Query Frame = 0
Query:   60 MSAAVRASLT--SFQSGRKSSMLSRKRQRPPPLQGCSVCVTDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGTEVPTSMA-TSSVTNSSHVKDHASFTKWQHAAPANVLDAATLYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATTLEWLEDCILQQKLLDTAKYQVPQLMEVPMAESSQPSSQAQIITSSTFLGLRVAVGPLAVRDASTAYSVCSQLSSGRGKILAHDAAGYVTSGSPTHVLCGHNVTSRELEAIKDAQSRNSRVLKVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLIADGRSEDSEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYALGTEVTPTRSPA----SKTGAAHSDSKTKGRVEMRDAEAINLFQKLTEKFDREAAEGGETAGDEGVEENIRFTRRSRSTSREHMDDERSWSMDASQSQVIVHRDLTPPPSPTQRVKRARQTL 760
            M+A++ AS T  + +  R S+MLSRKRQRPP L GC++CV  F DDD + I + IRRMG  FS+ + PKTTHLVCE AGS +HRA C+ NSR GV PI IV +SWL+SC+ A+M  +   HV+LPL+GMI+CS+GF+ +E+  IS TA  LGA+YSKSL+A+CTHLIC+   GDKY FAKEVP MFIV   W+E CA+L LL+DE+RF+    D++ + + SGTEV  S A +SS+T  SH      +TKWQ A+P++VLDA TLYLTESPLR+NDKHAPLRAKAL+LANLGGAS+S+ELTD VNYI+VVRMP+APSKI +IR+AQ+ G+I TTLEWLE CIL QKLL TA ++ PQL +V M +SSQPSSQAQ ITSS FLG+RVAVGPLAVRD ST Y+VC+QL+SGR K+LAHDAAGYVTSG+PTHVLC  NV +RELE +KDAQ++N +VLKVT FWVDMCVKAE LLPV +C+LF PVPYE PL D   QK+ LSISGF+N RERDWNRRREVLKRLAV+LGAKCSERMRRRQTNYLIAD R  +SEKV+KAREWGIKVVTHEWLLACARAGKVVGAEGYA G++  PTRSP     SK     S+++++  +E+ D++AI LFQKL+ K  +   E      +E ++E IRF+RRSRS SR+  DDERSWSMDASQSQVIVHRDLTPPPSPTQ+VKR R TL
Sbjct:    1 MNASLTASQTVSAIRRTRLSAMLSRKRQRPPALHGCTICVAGFSDDDKLAIVSHIRRMGATFSEHINPKTTHLVCERAGSEIHRAACEHNSREGVTPIIIVHRSWLESCQAAAMHTDTPAHVVLPLSGMIVCSSGFEAEEKHQISNTAKELGATYSKSLTADCTHLICKKAAGDKYEFAKEVPEMFIVNRHWIESCAELGLLLDETRFSFRPLDSKHSRSSSGTEVAPSCANSSSITPLSHRPSSRVYTKWQDASPSDVLDAVTLYLTESPLRENDKHAPLRAKALQLANLGGASLSAELTDLVNYIIVVRMPVAPSKIPIIRKAQQRGSITTTLEWLEQCILHQKLLSTANFEPPQLGQVLMPDSSQPSSQAQTITSSVFLGMRVAVGPLAVRDTSTTYTVCAQLASGRAKVLAHDAAGYVTSGTPTHVLCAPNVGARELEVVKDAQAKNVKVLKVTPFWVDMCVKAETLLPVFICSLFSPVPYEMPLSDMVTQKVSLSISGFRNERERDWNRRREVLKRLAVMLGAKCSERMRRRQTNYLIADSRVGESEKVVKAREWGIKVVTHEWLLACARAGKVVGAEGYAFGSDDIPTRSPGQSPNSKMEPLRSEARSQASMELPDSDAIVLFQKLSAKI-KVGKEDDADCREEVLKETIRFSRRSRSVSRDGADDERSWSMDASQSQVIVHRDLTPPPSPTQKVKRPRLTL 707          
BLAST of Ggra8404.t1 vs. uniprot
Match: R7QGX3 (DNA topoisomerase 2-binding protein 1 (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX3_CHOCR)

HSP 1 Score: 402 bits (1033), Expect = 5.540e-127
Identity = 236/597 (39.53%), Postives = 333/597 (55.78%), Query Frame = 0
Query:   83 KRQRPPPLQGCSVCVTDFGDDDTVHIAA---QIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGV--KPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRF----------TLDTEDA----------REATTCSGTEVPTSMATSSVTN----------SSHVKDHASFTKWQHAAPANVLDAATLYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATTLEWLEDCILQQKLLDTAKY-QVPQLMEVPMAESSQPSSQAQIITSSTFLGLRVAVGPLAVRDASTAYSVCSQLSSGRGKILAHDAAGYVTSGSPTHVLCGHNVTSRELEAIKDAQSRNSRVLKVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLIADGRSED-SEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYA 642
            ++ R   L GC +  +    D    + +   ++  +GG F  ++ P  THL+C  AGS  HR  C RN  AG     + IV  SWL + E A   +    H L PL G  LC +G+  DE+  I   A  +GAS+SK L   CTHLIC  PTG KY+FA+ +  M +V   W+ QCAK  LLV+E  +          T ++E A          R+  T S     +S A SS+            + HV      +KW    P   LD  T YLT    ++   HAPLRAKAL+L   GG S+++ELT  VNY+V++R P+  +KI  +  AQ  G    +LEWLE C+++Q +++  +  +     E P   S+Q   QA    S  F+G+R A+GPLA+ D     +V  +L  GRGK+L HDA G VTSG  THV+CG ++++     ++ AQ  NS V+ VT  W+D C++ E L+PV+ C LF PVP+ETPL++   +K+ ++I+G Q S ER+ NRRR+VL RL   LGA  SERM + +T +LIAD R+   SEK+ KA+ WGI +V+++WLLACA AG +V A  YA
Sbjct:    6 RKSRAKVLAGCVLTCSGVEFDSVEAVDSFCNRVSALGGTFEAEILPTVTHLICAEAGSTKHRDACLRNLEAGPDRSRMHIVMPSWLDAVENALARVPTGSHALPPLEGFSLCCSGYGMDEKQKIETLAREMGASFSKVLRVTCTHLICLKPTGQKYDFARSMSSMRVVTKEWVYQCAKEKLLVEEDLYLVNHRSRAAKTNNSETAPSARRSETLERQGGTASDGRAESSAAPSSIPXXXXXXXXSSVTKHVPQQERVSKWNETKPGLYLDGMTFYLTPCTAQEKVLHAPLRAKALKLIASGGGSLAAELTRRVNYVVLIRAPVLRTKIAELERAQRMGVAVVSLEWLERCVVKQCVVEDEEVDRYDWDAEEPNERSTQFRPQADF-HSRLFVGMRCALGPLALYDTGAVAAVARKLQRGRGKVLPHDARGVVTSGVATHVVCGESLSAGGRRVVETAQKVNSHVVIVTTTWIDACLQEERLVPVTDCVLFAPVPHETPLREMLRRKVSVTITGHQMSAEREPNRRRDVLARLTRGLGAGYSERMTKGKTTHLIADARTATRSEKIEKAKRWGIAIVSYKWLLACAEAGDIVDAGDYA 601          
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A507FJG4 (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FJG4_9FUNG)

HSP 1 Score: 130 bits (328), Expect = 1.920e-27
Identity = 168/679 (24.74%), Postives = 275/679 (40.50%), Query Frame = 0
Query:   95 VCVTDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSC----ETASMFIN-----CSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPH-MFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGTEVPTSMATSSVTNSSHVKDHASFTKWQHAAPANVLDAATLYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATT--------LEWLEDCILQQK---LLD-TAKYQVPQLMEVPMAESSQPSSQAQIITSSTFLGLRVAVGP-------------------LAVRDASTAYSVCSQLSSGRG------------------KILAHDAA---GYVTSGSPTHVLCGHNVTSR--------ELEAIKDAQSRNSRVLKVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYL--IADGRSEDSEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYALGTEVTPTRSPASKTGAAHSDSKTKGRVEMRDAEAINLFQKLTEKFDREAAEGGETAGD 701
            V  T    D+     +    MG  FS  L   TTHL+    GS  ++        A    I IVR SW+ +C    E  ++ ++        H L PL G+I+C TGFD  ER+ I   A SLGA ++  LS +CTHLI     G K+ FA  V H + +V   WL+ C   N  V+ES +T+   +   ATT        S AT+ +   S +  +          P +  D A +       R+   +A +    +  A    ASIS   T  +     + M    S     R A E G  +T+           +++  + +K   LLD TA          P   +S+  +  + + +ST     +AVG                     A R +S   S+ +   +  G                  +IL+ +     G V SG   +VL   ++ +         E      ++  ++R++ V++ W++ C++   L  V    LF  + Y  P Q F     ++ ++G +          RE +++L   +G   +E M ++ T+ +  I + +S  S K+ +A+EWGI+VV+ +WL  CA  G+++    Y L  + T   SP   +G + S  K    V  +  E  N+         RE  E  +T+ D
Sbjct:    5 VTATGLPSDERRRAESVCLAMGAVFSPSLTNSTTHLIAACPGSEKYKV-------ASSLGIGIVRVSWIDACLVLIENDALSMSEIEKITDLHRLRPLEGLIICLTGFDVRERNSIEANAKSLGAQFATDLSKQCTHLIATGAKGKKFEFA--VKHGVLVVSKAWLDACITTNEHVNESNYTIPPRNLSTATTEQRLPDRQSNATN-IQLPSRISHN----------PGSASDRAEIEKVSPISRNTIANANIGTSDMYKATSERASISRGATSHIPNQTSIVMSAFKSLENPERAAVETGKSSTSESPCMNPAARAVDNVQVTKKTPPLLDETASGTKDMTACKPSVAASETKNNRKSVHAST-RRKSLAVGTNSTPKKGEHSSQGGKRMSAFAKRRSSIRISIAASGIARFGTLFDGLHFAIEGFDDADTEILSEEIQCQDGEVHSGMIQNVLKSMSIETLVYLICPLGEGPISSWSKDISARIVVVSECWIEQCLEDGYLYGVDESILFQAIRYRQPSQLF-----VVGVTGHEGLA-------REHIRKLTQAMGGTFTEAMSKKNTHLIAFIRESQSPPSLKLTRAKEWGIEVVSVDWLFQCAIIGQLI----YPLPMDDTTQESPPQHSGTSTSSKKRNKSVSGQPQEVQNI---------RETVESAKTSRD 637          
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A0L0D0Q3 (DNA topoisomerase 2-binding protein 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D0Q3_THETB)

HSP 1 Score: 114 bits (284), Expect = 3.430e-22
Identity = 137/598 (22.91%), Postives = 228/598 (38.13%), Query Frame = 0
Query:  128 THLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGTEVPTSMATSSVTNSSHVKDHASFTKWQHAAPANVLDAATLYLTESPLRDN------------DKHAPLRAKALRLANL--GGASISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATTLEWLEDCILQQKLLDTAKYQVPQLME--VPMAESSQPSSQAQIITSSTFLGLRVAVGPLAVRDASTAYSVCSQLSSGRG--------------KILAHDAAGYVTSGSPTHVLCGHNVTSRELEAIK---------------------------------------DAQSRNSRVLK--------VTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLI-ADGRS---EDSEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYALG 644
            THLV +  GS  +RA    ++       A+V + W+  C+     +  + + L PLAG+++C T  D D+RD I     + G  Y ++L  E THL+   P+G KY  A E  ++ +V   WL+ C K    VDE+ F +                P    T+ V+ ++   D  +   W    P  +L++      +SP+ D              K   L  + +    L  GG  +    +  +N  VV R+P A  ++      +       + +WL        L D  ++ +  +    +P    + P++  +     T   + +   P  + ++    S+    S G G              + L  DAA  V  G    V+         L AI+                                        A SR+S V          VT  WV   + A  L+ ++ C LF P+P   PL       +++S++G    R+         ++R+AV LGA   ER+ RR T  +  AD  +   E + K+ KA  WG+ +V   WL     AG ++ +  YA+G
Sbjct:   35 THLVADRVGSDKYRAALSISA-------AVVTKQWVLKCKADGRRVPEAMYALPPLAGLVICVTQLDADDRDRIRSVVSANGGDYMRNLVPEATHLLALQPSGTKYEKAGEW-NVRVVSPAWLDACIKARAAVDETPFAI---------------APPPGVTAGVSLAAEPVDELASGAWLEGEPPFLLNSR-----DSPVLDKLDGLLDGRNVFLHKFGSLERRRMTRIVLAAGGHVVDEPDSSVINTWVVPRLPSA-DELDAFARWRHPPRAFVSGKWLWVLAQSSALPDIGEFTLATIASAALPPPTPTGPTASPKPYVEPTPTPMVLEPTPQTLPESGGVDSMLDLYSGGSGPGVSSHRTLRRTISQSLMADAASPVLFGRSQFVVDDRVTGDEVLRAIRRAGGALVPSYKALCSSADRENCPPGSRIVARYVVLPHGVSASSRSSIVASLATADVALVTPDWVLASLAANELVDITSCPLFTPLPVALPLAP--RSDVVVSVTGCWPERD--------AIRRMAVALGATFEERLSRRVTVLVCEADALASPVEPASKIAKALRWGVSLVHSGWLRDSLWAGSLLDSARYAVG 593          
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A1Y2BYJ1 (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BYJ1_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 7.290e-20
Identity = 125/562 (22.24%), Postives = 224/562 (39.86%), Query Frame = 0
Query:   95 VCVTDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFIN-----------CSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGTEVPTSMATSSVTNSSHVKDHASFTKWQHAAPANVLDAATLYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATTLEWLEDCILQQK-----LLDTAKYQVPQLMEVPMAESSQPSSQAQIITSSTFLGLRVAVGPLAVRDASTAYSVCSQLSSGRGKILAHDAAGYVTS----GSPTHVLCGHNVTSRELEAIKDAQSRNSRVLKVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLIADGRSEDSEKVLKAREWGIKVVTHEWLLACARAGKVV 636
            V  T    D+  H+ +    +G  +S  L   TTHL+    GS  +R    +        I IVR SW+++C      +               H +  L G ++C TGF  ++R+ I   A +LGA ++  L+ ECTHLI  A +G K+ FA +   + +V + W+++CA++N  + E  F +   +   A   +    P++ + ++ T    V            AP ++                 +   +     RL+ +    I  + + F N   +++     S       +    ++A T       +  QK     +  + K     ++      +S   +     TS+ F GL   +     +D     S   QL  G    +AH   G   +    G  T V+    +    +  + D       +  V++ W++ C++   +       LF  V Y  P   F      + I+G++          RE +++L   +G   +E + R+ T +LIA   +  S KV++AREWG+ VV+ +WL  CA  G +V
Sbjct:    5 VTATGLEVDERAHVESSCTTIGAVYSPSLTQSTTHLIATGPGSEKYRVASSKLK------IPIVRPSWIEACLAIYSRVKRPLSVDEIEEVTQIHKIKCLDGQVVCVTGFPLEQRNRIEALAKALGARFNSDLTKECTHLIALAASGKKFEFAVK-NGIRVVDMKWIDKCAEVNECLSEKSFPIGVSNDDLAGPIAIKLEPSAASNTTATAVPRVP-----------APISIPXXXXXXXXXXXXETFPQPKQITPIMPRLSTIK-KQIDPD-SSFTNSPTLLQQATRKST----APSDSRKSLAPTSRKSLSAVPSQKNPRASMKPSQKRSRKSMISDSFYTASCSRNTNAAGTSTLFEGLIFLIQGFDGQDTEI-LSDEVQLHDGE---IAHTLNGLREALRVRGGGTGVV----IVPLGVGPVGDVDG----LTVVSECWIERCIEDSSVHAFDGIVLFRGVKYAPPQGTFC-----VGITGYEGLD-------REQIRKLVCAMGGSFTESLSRKNT-HLIAHSDAGQSMKVVRAREWGVTVVSVDWLFGCAERGVLV 517          
BLAST of Ggra8404.t1 vs. uniprot
Match: DNA topoisomerase 2-binding protein 1 isoform X1 n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900C70E (DNA topoisomerase 2-binding protein 1 isoform X1 n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900C70E)

HSP 1 Score: 101 bits (251), Expect = 2.840e-18
Identity = 99/381 (25.98%), Postives = 150/381 (39.37%), Query Frame = 0
Query:   74 GRKSSMLSRKRQRPPPLQGCSVCV---------TDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDA--------REATTCSGTEVPTSMATSSVTNSSHVKDHASFTKWQHA-----AP----ANVLDAAT-----------------------LYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQL--IREAQEHGTIATTL-EWLEDCILQQK 402
            G +  +   K QRP P QG + C+         + F  D+ V I   +  MGG            ++ ++  +  +R          V    IV  +WL  C     F+      + P +G+ +  T    DER ++ K  +  G  YS  L+  CTHLIC AP GDKYN AK   H+ IV   WL+Q       ++E  + +    A           +  +  E   SM+T++V+NS  V      T  Q+      AP     +  DA T                       LYL++  L      AP   K + +   GG S     +D + +I+V     +PS+I+   IR     G I     +WL DCI ++K
Sbjct:   75 GPQCVLFCAKEQRPLPNQGFTCCLAMDGVKILASGFEADEKVEIKKLVEAMGGVLQAKASMDVNFVIVKNVLAAKYRWA------VNVLKKPIVSINWLHQCWKEHRFVPHESFRVHPFSGLTISVTRIPADERKEVEKIVLQNGGKYSPELTKACTHLICPAPVGDKYNVAKSWGHIRIVTKRWLDQSVARGACLNEESYRIQGSSASMNSVRIKNRHSLENVIESVQSMSTATVSNSHAVDSDMGATDCQNTSSFSGAPFFSKGDESDAPTEQQKNNTNFDGCVAGDSQTDDNDLYLSDCRLLILGFSAPEMRKLVNMVRKGGGSRYMSFSDKLTHIIVG----SPSEIETKEIRNLAALGVIHVVKPDWLADCISEKK 445          
BLAST of Ggra8404.t1 vs. uniprot
Match: DNA topoisomerase 2-binding protein 1-A isoform X1 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E3D80 (DNA topoisomerase 2-binding protein 1-A isoform X1 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E3D80)

HSP 1 Score: 99.8 bits (247), Expect = 8.510e-18
Identity = 100/402 (24.88%), Postives = 157/402 (39.05%), Query Frame = 0
Query:   74 GRKSSMLSRKRQRPPPLQGCSVCV---------TDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGT--------EVPTSMATSSVTNSSHVKDHASFTKWQHA-----AP----ANVLDAAT-----------------------LYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQL--IREAQEHGTIATTL-EWLEDCILQQKLLDTAKYQVPQLMEVPMAESS 423
            G +  +   K QRP P QG + C+         + F  D+ V I   +  MGG            ++ ++  +  +R          V    IV  +WL  C     F+      + P +G+ +  TGF  DER ++ K  +  G  Y + L+  CTHLIC AP GDKY+ AK    + IV   WL+Q       ++E  + +    A + +  +          E   SM+T++V+NS  V      T  Q+      AP        DA T                       LYL++  L      AP   K + +   GG S      D + +I+V     +PS+I+   IR     G I     +WL DCI ++K +   +  +   +  P   S+
Sbjct:   75 GPQCVLFCAKEQRPLPNQGFTCCLAMDGVKILASGFEKDEKVEIKKLVAAMGGVLQAKASMDVNFVIVKNVLAAKYRWALN------VLKKPIVSINWLHQCWKEHRFVPHESFRVHPFSGLTISVTGFPADERKEVEKIVLQNGGKYYRELTKACTHLICSAPIGDKYDVAKSWGCIRIVTKRWLDQSVARGACLNEECYRIQGSSASKNSVRTKNQHSLENVIESVQSMSTATVSNSHAVDSDTGATDCQNTSSFSGAPFFSKGEESDAPTEHQKNNTNFDECVAGDSQTDDNDLYLSDCRLLILGFSAPEMRKLVNMVRKGGGSRYMSFNDKLTHIIVG----SPSEIETKEIRNLAALGVIHVVKPDWLADCISEKKEVPVLRKHIANDLLFPRGSSA 466          
BLAST of Ggra8404.t1 vs. uniprot
Match: DNA topoisomerase 2-binding protein 1 isoform X2 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF875 (DNA topoisomerase 2-binding protein 1 isoform X2 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF875)

HSP 1 Score: 99.4 bits (246), Expect = 1.120e-17
Identity = 98/381 (25.72%), Postives = 150/381 (39.37%), Query Frame = 0
Query:   74 GRKSSMLSRKRQRPPPLQGCSVCV---------TDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWLEQCAKLNLLVDESRFTLDTEDAREATTCSGT--------EVPTSMATSSVTNSSHVKDHASFTKWQHA-----AP----ANVLDAAT-----------------------LYLTESPLRDNDKHAPLRAKALRLANLGGASISSELTDFVNYIVVVRMPIAPSKIQL--IREAQEHGTIATTL-EWLEDCILQQK 402
            G +  +   K QRP P QG + C+         + F  D+ V I   +  MGG            ++ ++  +  +R          V    IV  +WL  C     F+      + P +G+ +  TGF  DER ++ K  +  G  Y + L+  CTHLIC AP GDKY+ AK    + IV   WL+Q       ++E  + +    A + +  +          E   SM+T++V+NS  V      T  Q+      AP        DA T                       LYL++  L      AP   K + +   GG S      D + +I+V     +PS+I+   IR     G I     +WL DCI ++K
Sbjct:   75 GPQCVLFCAKEQRPLPNQGFTCCLAMDGVKILASGFEKDEKVEIKKLVAAMGGVLQAKASMDVNFVIVKNVLAAKYRWALN------VLKKPIVSINWLHQCWKEHRFVPHESFRVHPFSGLTISVTGFPADERKEVEKIVLQNGGKYYRELTKACTHLICSAPIGDKYDVAKSWGCIRIVTKRWLDQSVARGACLNEECYRIQGSSASKNSVRTKNQHSLENVIESVQSMSTATVSNSHAVDSDTGATDCQNTSSFSGAPFFSKGEESDAPTEHQKNNTNFDECVAGDSQTDDNDLYLSDCRLLILGFSAPEMRKLVNMVRKGGGSRYMSFNDKLTHIIVG----SPSEIETKEIRNLAALGVIHVVKPDWLADCISEKK 445          
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A4P9XBN6 (Uncharacterized protein n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XBN6_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 6.900e-16
Identity = 57/182 (31.32%), Postives = 89/182 (48.90%), Query Frame = 0
Query:   88 PPLQGCSVCVTDFGDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRAGVKPIAIVRQSWLQSCETASM------FINCSPHVLLPLAGMILCSTGFDRDERDDISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPH-MFIVRLPWLEQCAKLNLLVDE 262
            P L G  +  +   ++    +  ++  M G + D++   TT L+ E AGS  HR   +   R    PI IV+  W+      S       F++   + + PL  +++ STGF    R++I      LGA+YS SL+ +C+HLI + P+G KY FA  V H + IV + WL    K + L  E
Sbjct:   43 PVLSGALIVCSGLREEMRHTLRQRVLAMQGTWRDEITDDTTVLIMERAGSEKHRRAAEMRRRG--HPIQIVKPQWIDEIYARSQRERFDPFVSSRHYPVRPLEQLVITSTGFLEAAREEIEALVADLGATYSPSLTMQCSHLIAKHPSGPKYQFA--VQHGILIVHIDWLRAAHKSDALPRE 220          
BLAST of Ggra8404.t1 vs. uniprot
Match: A0A5J4YN82 (DNA topoisomerase 2-binding protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN82_PORPP)

HSP 1 Score: 87.8 bits (216), Expect = 4.650e-14
Identity = 87/338 (25.74%), Postives = 148/338 (43.79%), Query Frame = 0
Query:  419 MAESSQPSSQAQIITSSTFLGLRVAVGPLAVRDASTAYSVCSQLSSGRGKILA-HDAAGYVTSGSPTHVLC-------------------GHNVTSRELEAIKDAQSRN--------------------------SRVL-----KVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTAQKIMLSISGFQN------SRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLIADGR----SEDSEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYALGTEV-TPTRSPASKTGAAHSDSKTKGRVEMRDAEAINLFQKLTEKFDREAAE 694
            + E       A I  S  F GLR  +GPL   + S A +   ++ +  G++L  H  +  + SG PTHVL                     H  ++ ++ ++  ++SR+                          SR L      +T  W++ C+K   +L    C L+ P+P    +++F  + ++L ++GF +      +++R+W  RR+ L     LLGA  SE + R +T +LI D       + S+K+ +AREWGI VV  +WLL  ARAG+ + +E +     + TP+     + G A  D  T G +      A  L ++  +     AA+
Sbjct:  562 LTEDVGQHENASIAKSDIFRGLRFDLGPLMEINRSLAETARREILACGGRVLCLHSDSLRLKSGVPTHVLWPTVRRAEQEERLLRKHDGQDHGASAIQIGSLSRSRSRSKPEFEDCVSAEVEGEDGAASGLAVGSSRGLISVPADITVSWIEACLKEMRVLNADACILYQPLP-PPAVEEF--RSLVLCLTGFSSKSASNQNQQRNW--RRKTLTSCITLLGAGYSEDLLRSKTTHLICDSAYLSAEKPSDKLKRAREWGINVVNVDWLLCSARAGRPLPSESFKSALVMSTPSER---RQGVAEGD--TVGAISQHGRPATVLSRETPQSASLRAAD 889          
The following BLAST results are available for this feature:
BLAST of Ggra8404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKK50.000e+066.10BRCT domain-containing protein n=1 Tax=Gracilariop... [more]
R7QGX35.540e-12739.53DNA topoisomerase 2-binding protein 1 (Fragment) n... [more]
A0A507FJG41.920e-2724.74Uncharacterized protein n=1 Tax=Chytriomyces confe... [more]
A0A0L0D0Q33.430e-2222.91DNA topoisomerase 2-binding protein 1 n=1 Tax=Thec... [more]
A0A1Y2BYJ17.290e-2022.24Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
DNA topoisomerase 2-binding protein 1 isoform X1 n=2 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900C70E2.840e-1825.98DNA topoisomerase 2-binding protein 1 isoform X1 n... [more]
DNA topoisomerase 2-binding protein 1-A isoform X1 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E3D808.510e-1824.88DNA topoisomerase 2-binding protein 1-A isoform X1... [more]
DNA topoisomerase 2-binding protein 1 isoform X2 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF8751.120e-1725.72DNA topoisomerase 2-binding protein 1 isoform X2 n... [more]
A0A4P9XBN66.900e-1631.32Uncharacterized protein n=1 Tax=Caulochytrium prot... [more]
A0A5J4YN824.650e-1425.74DNA topoisomerase 2-binding protein 1 n=1 Tax=Porp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 313..401
e-value: 84.0
score: 3.7
coord: 542..633
e-value: 1.5E-7
score: 41.1
coord: 180..257
e-value: 2.8E-5
score: 33.6
coord: 87..170
e-value: 2.6E-5
score: 33.7
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 570..625
e-value: 1.2E-10
score: 41.2
coord: 93..136
e-value: 8.4E-10
score: 38.5
coord: 186..249
e-value: 1.2E-15
score: 57.1
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 178..267
score: 14.70278
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 85..180
score: 13.03358
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 311..411
score: 13.784719
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 549..643
score: 16.14942
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 180..274
e-value: 3.1E-23
score: 83.9
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 75..179
e-value: 3.7E-15
score: 57.7
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 545..677
e-value: 2.5E-18
score: 68.2
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 294..412
e-value: 5.5E-8
score: 34.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 182..268
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 83..180
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 557..644
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 335..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 647..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..760
NoneNo IPR availablePANTHERPTHR13561DNA REPLICATION REGULATOR DPB11-RELATEDcoord: 89..664
NoneNo IPR availableCDDcd17731BRCT_TopBP1_rpt2_likecoord: 182..257
e-value: 9.63465E-25
score: 96.0698
NoneNo IPR availableCDDcd00027BRCTcoord: 555..629
e-value: 6.4043E-13
score: 62.3792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:480733..483015 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8404.t1Ggra8404.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 480733..483015 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8404.t1 ID=Ggra8404.t1|Name=Ggra8404.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=761bp
MKGHLRGDKLRLLSDGAQVIARSLFVPSSQLSPGIVFVDARNAHFLSPAL
LPAIAARVTMSAAVRASLTSFQSGRKSSMLSRKRQRPPPLQGCSVCVTDF
GDDDTVHIAAQIRRMGGEFSDDLRPKTTHLVCESAGSLMHRAVCQRNSRA
GVKPIAIVRQSWLQSCETASMFINCSPHVLLPLAGMILCSTGFDRDERDD
ISKTAVSLGASYSKSLSAECTHLICRAPTGDKYNFAKEVPHMFIVRLPWL
EQCAKLNLLVDESRFTLDTEDAREATTCSGTEVPTSMATSSVTNSSHVKD
HASFTKWQHAAPANVLDAATLYLTESPLRDNDKHAPLRAKALRLANLGGA
SISSELTDFVNYIVVVRMPIAPSKIQLIREAQEHGTIATTLEWLEDCILQ
QKLLDTAKYQVPQLMEVPMAESSQPSSQAQIITSSTFLGLRVAVGPLAVR
DASTAYSVCSQLSSGRGKILAHDAAGYVTSGSPTHVLCGHNVTSRELEAI
KDAQSRNSRVLKVTQFWVDMCVKAEGLLPVSVCALFGPVPYETPLQDFTA
QKIMLSISGFQNSRERDWNRRREVLKRLAVLLGAKCSERMRRRQTNYLIA
DGRSEDSEKVLKAREWGIKVVTHEWLLACARAGKVVGAEGYALGTEVTPT
RSPASKTGAAHSDSKTKGRVEMRDAEAINLFQKLTEKFDREAAEGGETAG
DEGVEENIRFTRRSRSTSREHMDDERSWSMDASQSQVIVHRDLTPPPSPT
QRVKRARQTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf