Ggra8398.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8398.t1
Unique NameGgra8398.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length881
Homology
BLAST of Ggra8398.t1 vs. uniprot
Match: A0A2V3IKL6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL6_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 2.880e-79
Identity = 307/939 (32.69%), Postives = 450/939 (47.92%), Query Frame = 0
Query:    1 MESVSISDVEMEEDEQVAPVTSSQPVPHTQVPAAGISLPK-PSSQPTPRRVTMRERALAXXXXXXXXXXXXXXXXXXXXXXXXXPTEKGTDDVR--GDDSENRAAASAPRHKPAQRKSPRSSSKAAPPESVVEP--NKQDSQPLASKHHNAD---GKKAEAHGTAKAKKXQSRREANTRKGAKTATVLPKSIESSTDLGSNKQNGPHGAVPNGHSAPSKDLFEAPMLSLGTRRDQKKRKSTVDLVQGKDAAHDSGSESDVILLQSKANATAPPRARKKARVDSAKPPTSPKTTSKSLKKKKEK----AIPPLPADPI--IVAPVTVV----PVDLQQNEAQAPSRKKKASKKTTRAELRALEEDEPILVRDKRVGKPAAQHSSKDPPASKVAE-----QTPKPVPPKRRPGRPRKYPKVDASDTHPPVKATVEEEHSSKAKEDKEESVPEKKTQRQTKPRGRKAKRGAPDDSESAKKPAKEDG-DDFEVSKVRAAPRQAS--RSASRLKA---PGQTASEPASNPTDDHDAPGH--VGIEKPKTKRAKTTESKVQGNEGSMNTVTQSPTRTKGVSANESVLQSITKSKRLSFAPSATPRGTSVMQRSDLGKRRSRRQSLSHQEGLSRLTSVVDQLQREGESFLQAEHRICDQLVPFAPDSPADLTSSLPHGSVGAPVSEDDRKAIADAALRDAVMHAKLEYQANHRAAISKLAENLVKAVKDWKNAKNAVLRDIIPEELRPE---------AEVPVEN---ADQIEHSLEAPNTPGATDVTDDSPEDIVPDEKGEEIDGLDKNENPETASNVISIVARK-------------------DREEAVARIRVLHNAEAVKKYVGFSYADLELSGYRPCAILKLCEFDQGLSYDELYDKTPFGKNMLKKNINLLVVSKYLVERTLETASGQKILVYSTVPNIS 877
            MESVSIS++E E ++++ P  +SQP P    P    ++P+ P SQP  +R+TMR+RA A                           + G   V    +D     +    R  P ++K  + +S     + ++E   +K D++ L S         G K+          X  R++  + K +   T  P + +   +   ++ N   G   +    P K    +   S   R  +KKRK+ V + QG    + S + +D+++L++  +A    R  KKA++D +K     KTT              A   + AD    +++P  V     P D     A   S KKK SKK+ R    A++EDE I+V +    +P +++ SK   A K AE     Q   P PP+R  GRPRK+PK +  D     KA V    ++K  +D+      + + R    +GRK K+ A  D E      KE G DD +V  +  A    S  R+ S+LK    P + A + +++  ++    G      + PK K A   + +   NEG+                 +S LQS+ K KR+S  P  +PRG     R+++     RRQSLSH+E LSRLT+VVDQLQ  GE+FL  +HR+CDQL P    S   + S L +G+        DRKAIADA+LRDA+ HAKL YQ N RAAIS+LAENLVKA++DWKN KNA LRD+IP +LRP+         A    +N   ++Q++H   +    G  D    +    V   K +E  G+D   N E   + I+   R+                    R+  V RI V+   + +KK+VG SY  L L  YR  +ILKLCE   GL++DELYDKTP G+ MLKK I  L+   YL+  TLE   G++I ++ T P+IS
Sbjct:    7 MESVSISELESEGEDEITPRVTSQPAPS---PPRQPTVPQLPLSQPPTKRMTMRDRAAALREARMRREHGKSGKNSNHGALEIHDEKNGEAHVNTTNEDVMPLKSLQVSRKDPPRKKVSKKASSQTDDDVLLESAGSKNDTEHLRSSGTGRSATAGSKSGXXXXXXXXXXXXRKDDTSGKASSAQTNHPSTTQQLHEELQSEPNTLRGHASSHQHPPLKGGARSQKASTAKRVAEKKRKA-VAVSQGD--GNTSDANTDIVVLETARSAPPTSRQPKKAKLDKSKSTGLSKTTGXXXXXXXXXXXXXASAKVSADDTEGLISPQHVKGQADPNDDGPKAAVLTSGKKKVSKKSARELASAVDEDELIVVDEIHTNEPGSKYPSK---AHKGAEKVLAVQPVSPTPPRRGRGRPRKHPKPETVDPESSGKAAVVGRPAAKLPKDQGAPASPRHSPRAQATKGRKGKQLASVDLE------KEQGTDDDDVVLLHPATPSVSLHRTGSKLKKRSPPARAAKKGSASQPEEVTLSGEDVEMTDVPKPKEAVAGDKEGHLNEGN----------------RDSALQSVAKKKRVSIMPGPSPRGLRPKTRTEMTGA-GRRQSLSHEEALSRLTAVVDQLQHNGEAFLHTQHRVCDQLAPSPLASQTSIVSYLTNGT--------DRKAIADASLRDAITHAKLVYQRNQRAAISELAENLVKAMQDWKNEKNAFLRDMIPMDLRPKPAHGLDEGGASFHTDNDEASEQVKHGETSKRASGGDDAGTGA---TVARWKAQE--GMDTLGNDEEIEDDINEPLRQMAVREVSEGVKLMPAGFTESRKAGVNRIPVMKKVDELKKFVGRSYDKLRLGCYRSSSILKLCENVGGLTFDELYDKTPIGRAMLKKKIINLMDKGYLLGETLEGDDGEQIELFYTAPHIS 900          
The following BLAST results are available for this feature:
BLAST of Ggra8398.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKL62.880e-7932.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..589
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..573
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..761

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:468791..471433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8398.t1Ggra8398.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 468791..471433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8398.t1 ID=Ggra8398.t1|Name=Ggra8398.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=881bp
MESVSISDVEMEEDEQVAPVTSSQPVPHTQVPAAGISLPKPSSQPTPRRV
TMRERALAMREARLKKSQAKSATKQSAEATGKDPTEKGTDDVRGDDSENR
AAASAPRHKPAQRKSPRSSSKAAPPESVVEPNKQDSQPLASKHHNADGKK
AEAHGTAKAKKAQSRREANTRKGAKTATVLPKSIESSTDLGSNKQNGPHG
AVPNGHSAPSKDLFEAPMLSLGTRRDQKKRKSTVDLVQGKDAAHDSGSES
DVILLQSKANATAPPRARKKARVDSAKPPTSPKTTSKSLKKKKEKAIPPL
PADPIIVAPVTVVPVDLQQNEAQAPSRKKKASKKTTRAELRALEEDEPIL
VRDKRVGKPAAQHSSKDPPASKVAEQTPKPVPPKRRPGRPRKYPKVDASD
THPPVKATVEEEHSSKAKEDKEESVPEKKTQRQTKPRGRKAKRGAPDDSE
SAKKPAKEDGDDFEVSKVRAAPRQASRSASRLKAPGQTASEPASNPTDDH
DAPGHVGIEKPKTKRAKTTESKVQGNEGSMNTVTQSPTRTKGVSANESVL
QSITKSKRLSFAPSATPRGTSVMQRSDLGKRRSRRQSLSHQEGLSRLTSV
VDQLQREGESFLQAEHRICDQLVPFAPDSPADLTSSLPHGSVGAPVSEDD
RKAIADAALRDAVMHAKLEYQANHRAAISKLAENLVKAVKDWKNAKNAVL
RDIIPEELRPEAEVPVENADQIEHSLEAPNTPGATDVTDDSPEDIVPDEK
GEEIDGLDKNENPETASNVISIVARKDREEAVARIRVLHNAEAVKKYVGF
SYADLELSGYRPCAILKLCEFDQGLSYDELYDKTPFGKNMLKKNINLLVV
SKYLVERTLETASGQKILVYSTVPNISTMI*
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