Ggra8397.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8397.t1
Unique NameGgra8397.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length257
Homology
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A2V3IKM7 (ATP synthase protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM7_9FLOR)

HSP 1 Score: 280 bits (715), Expect = 1.250e-91
Identity = 152/216 (70.37%), Postives = 173/216 (80.09%), Query Frame = 0
Query:   46 RHTVQANSLEESKRRAKSQYDNIPDLNQRYLAELSWAERKYGPQRVTKDVGKEAQRSILRSGRQSASKLPITKKAAETDRKDS-----DSEADLAQYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFFSYKVAVLIPLLTGEAFE 256
            R  +QANSLE+SKRRAKSQYDNIPDLNQ+YLAELSW ERKYGP R+ KD+ KEAQRSILRS  + A    + K++A  D+ D+     D EADL QY  LRNKLL DTLFVGALGLC +W+   +KEVQSF VGL GSMAYV LL RSVDRLGESAR  G G   SLQPAR+AILALL++ +AKNSQYLSVIPVL GFF+YKVA+LIPL+TGEAFE
Sbjct:   44 RQIIQANSLEDSKRRAKSQYDNIPDLNQQYLAELSWVERKYGPGRLKKDITKEAQRSILRSDCR-AGPQSVEKQSAGGDKMDTKDMRGDREADLTQYTVLRNKLLADTLFVGALGLCGVWSIATIKEVQSFTVGLCGSMAYVALLGRSVDRLGESARTTGTGIGVSLQPARIAILALLIVGAAKNSQYLSVIPVLIGFFTYKVALLIPLITGEAFE 258          
BLAST of Ggra8397.t1 vs. uniprot
Match: R7Q4B7 (Putative ATP synthase protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4B7_CHOCR)

HSP 1 Score: 244 bits (624), Expect = 7.320e-78
Identity = 134/211 (63.51%), Postives = 160/211 (75.83%), Query Frame = 0
Query:   46 RHTVQANSLEESKRRAKSQYDNIPDLNQRYLAELSWAERKYGPQRVTKDVGKEAQRSILRSGRQSASKLPITKKAAETDRKDSDSEADLAQYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFFSYKVAVLIPLLTGEAFE 256
            R  + ANSLEESKRRA+SQYDNIPDLNQRY++EL W ERKYGP+R+ K + KEAQ+SILR    SA     T K  E    D + EADL QY ++R++LL +T+FVG LG C  W    +KEVQSF +GL+GSMAYV LLSRSVDR+  +AR+ G    D+LQPAR+AIL LLVIASAKNS  LSV+PVL GFF+YKVA L+PLLTGEAFE
Sbjct:   47 RTIISANSLEESKRRARSQYDNIPDLNQRYISELGWVERKYGPKRLKKKIIKEAQQSILRPDGPSAPSASRTTKIEEPG-SDGNGEADLEQYNRIRSELLVNTIFVGMLGFCVAWGFGTVKEVQSFMMGLVGSMAYVYLLSRSVDRMATAARETGTMSGDALQPARLAILVLLVIASAKNSDKLSVLPVLFGFFTYKVATLLPLLTGEAFE 256          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A7S0T797 (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T797_9RHOD)

HSP 1 Score: 103 bits (256), Expect = 1.630e-23
Identity = 57/129 (44.19%), Postives = 84/129 (65.12%), Query Frame = 0
Query:  125 RKDSDSEADLAQYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFFSYKVAVLIPLLTGE 253
            RK  + +  L +Y QLR +L+ DT+ +G +G   I+ +  ++   SF VG++GS AYV LLSRSVD+L  +ARQ GQ  AD L  AR+ +L + ++   KN +YL V+P L GFF+YK+  L+P+  GE
Sbjct:   37 RKRREEQIALDKYNQLRLQLILDTVTLGLVGCFGIYASGSLRTSMSFGVGVVGSTAYVFLLSRSVDKLATAARQ-GQRSADILSGARLLLLGVCILFVVKNREYLDVLPALIGFFTYKLCTLLPVFFGE 164          
BLAST of Ggra8397.t1 vs. uniprot
Match: M2XQQ8 (ATP synthase protein I-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XQQ8_GALSU)

HSP 1 Score: 102 bits (255), Expect = 1.140e-22
Identity = 68/185 (36.76%), Postives = 105/185 (56.76%), Query Frame = 0
Query:   67 NIPDLNQRYLAELSWAERKYGPQRVTKDVGKEAQRSILRSGRQSASKLPITKKAAETDRKDSDSEADLAQYQQLRNKLLGDTLFVGALGLCAI-WTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFFSYKVAVLIPLL 250
            +IP L +RY AEL++ E K+GP+R      ++  ++ + + ++ A +               +    + QYQ ++  L G TL VGA  +  + W   G K   S+A GL GS+ YV LLSRSV+RL  S+ Q+ + W   L PAR+AI+ALL++  +K+ + L ++PV  GF +YKVA   PLL
Sbjct:   59 DIPTLEERYRAELAYVEEKFGPKRYETPELRDPLKTRILTNQEKAKQ---------------ERSRGIKQYQDIKRILFGATLGVGAFLIPLLGWLGSG-KIACSYAFGLGGSLIYVWLLSRSVERLASSSTQSFRDW---LGPARLAIVALLILTVSKHREELELLPVFLGFLTYKVATFFPLL 224          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A7S0QQT9 (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QQT9_9CRYP)

HSP 1 Score: 82.8 bits (203), Expect = 7.840e-15
Identity = 49/115 (42.61%), Postives = 74/115 (64.35%), Query Frame = 0
Query:  137 YQQLRNKLLGDTLFVGALGL--CAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFF-SYKVAVLIP 248
            Y++L+ +LL DT F+GAL L  C +W     K+  S+ +G++GS++Y  LL+R+ D LGE    + Q  + +  PAR  IL LL++A AKN + L ++P+L GFF  YK+A L P
Sbjct:  129 YEELKKELLNDTAFIGALSLLLCYMWLP--EKQSLSYFIGMIGSLSYSFLLTRTADSLGEQGNSSPQFASGT--PARFLILFLLILAFAKNRETLDILPMLGGFFIPYKLASLRP 239          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A7J7CEM8 (Uncharacterized protein n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CEM8_TRIWF)

HSP 1 Score: 71.6 bits (174), Expect = 7.790e-11
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0
Query:  135 AQYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNS--------QYLSVIPVLAGFFSYKVA 244
            AQY +L+NKL   TL +G +GL + + +   +   SF VGLLGS+AY+ +L  SVD + + A+   +G A   QP  +  +AL+++ +  N          +L +IP+L GFF+YK+A
Sbjct:  203 AQYFKLKNKLHMLTLGIGGVGLVSAYVSYSPEVAASFGVGLLGSLAYMRMLGNSVDSMADGAKGLVKGAA--AQPRLLVPVALVMVFNRWNGILVPEYGFMHLDLIPMLVGFFTYKIA 318          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A059A1Y8 (Uncharacterized protein n=5 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059A1Y8_EUCGR)

HSP 1 Score: 68.2 bits (165), Expect = 9.720e-10
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  136 QYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNS--------QYLSVIPVLAGFFSYKVAVLI 247
            +Y +L+ KL   TL +G +GL + + +  +K   SF VGLLGS+ YV +L +SVD + + A+  G       QP  +  +AL++I +  N          +L +IP+L GFF+YK+A  I
Sbjct:  172 EYSKLKRKLQILTLSIGGIGLVSAYVSYTLKTAASFGVGLLGSLIYVRMLGKSVDSMADGAK--GLINRSIGQPRLLVPVALVMIFNRWNEILVPDFGYMHLELIPMLVGFFTYKIATFI 289          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A8B8PWH0 (protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic-like isoform X1 n=2 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8PWH0_9MYRT)

HSP 1 Score: 66.6 bits (161), Expect = 4.170e-9
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  136 QYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNS--------QYLSVIPVLAGFFSYKVAVLI 247
            +Y +L+ KL   TL +G +GL + + +   +   SF +GLLGS+ YV +L +S+D + + A+   +G     QP  +  +AL++I S  N          +L +IP+L GFF+YK+A  I
Sbjct:  209 EYMKLKRKLQTLTLSIGGIGLVSAYVSYTPETAASFGIGLLGSLIYVRMLGKSIDSMVDGAKGLIKGSIG--QPRLLVPVALVMIFSRWNEILVPEFGYMHLELIPMLVGFFTYKIATFI 326          
BLAST of Ggra8397.t1 vs. uniprot
Match: protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D20E01 (protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D20E01)

HSP 1 Score: 66.2 bits (160), Expect = 5.230e-9
Identity = 41/120 (34.17%), Postives = 68/120 (56.67%), Query Frame = 0
Query:  136 QYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNS--------QYLSVIPVLAGFFSYKVAVLI 247
            +Y +L+ KL   TL +G +GL + + +   +   SF VGLLGS+ YV +L +S+D + + A+   +G     QP  +  +AL++I +  N          +L +IP+L GFF+YK+A  I
Sbjct:  194 EYMKLKRKLQILTLSIGGIGLVSAYVSYTPETAASFGVGLLGSLIYVRMLGKSIDSMADGAKGLIKGSIG--QPRLLVPVALVMIFNRWNEILVPEFGYMHLELIPMLVGFFTYKIATFI 311          
BLAST of Ggra8397.t1 vs. uniprot
Match: A0A2V0PER4 (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PER4_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 5.560e-9
Identity = 46/133 (34.59%), Postives = 71/133 (53.38%), Query Frame = 0
Query:  121 AETDRKDSDSEADLAQYQQLRNKLLGDTLFVGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNGQGWADSLQPARVAILALLVIASAKNSQY-------LSVIPVLAGFFSYKVAVL 246
            AE  R+ +++EA L +Y++L+   L  TL  GALG+       G     S+AVG +  + Y+ LL RSVD +G + R  G        P  +  + L+++ +  N  Y       L +IP+L GFF+YK+AVL
Sbjct:  262 AEAARRAAEAEAALKRYERLKADFLIWTLGAGALGIATAEFLYGKDIAASYAVGAVSGLLYLRLLGRSVDSIGGNGRSTGGA------PRLLIPVILVLVFNRWNQVYAADYGLTLQLIPMLLGFFTYKLAVL 388          
The following BLAST results are available for this feature:
BLAST of Ggra8397.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKM71.250e-9170.37ATP synthase protein I n=1 Tax=Gracilariopsis chor... [more]
R7Q4B77.320e-7863.51Putative ATP synthase protein n=1 Tax=Chondrus cri... [more]
A0A7S0T7971.630e-2344.19Hypothetical protein n=2 Tax=Erythrolobus madagasc... [more]
M2XQQ81.140e-2236.76ATP synthase protein I-like protein n=1 Tax=Galdie... [more]
A0A7S0QQT97.840e-1542.61Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7CEM87.790e-1137.29Uncharacterized protein n=2 Tax=Tripterygium wilfo... [more]
A0A059A1Y89.720e-1035.83Uncharacterized protein n=5 Tax=Eucalyptus grandis... [more]
A0A8B8PWH04.170e-934.17protein CONSERVED ONLY IN THE GREEN LINEAGE 160, c... [more]
protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D20E015.230e-934.17protein CONSERVED ONLY IN THE GREEN LINEAGE 160, c... [more]
A0A2V0PER45.560e-934.59Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..223
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:467442..468212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8397.t1Ggra8397.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 467442..468212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8397.t1 ID=Ggra8397.t1|Name=Ggra8397.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=257bp
MINAFVQSVALSNQGAKVSSWARCVKNSAPGVTGSVTGNARSGRARHTVQ
ANSLEESKRRAKSQYDNIPDLNQRYLAELSWAERKYGPQRVTKDVGKEAQ
RSILRSGRQSASKLPITKKAAETDRKDSDSEADLAQYQQLRNKLLGDTLF
VGALGLCAIWTACGMKEVQSFAVGLLGSMAYVTLLSRSVDRLGESARQNG
QGWADSLQPARVAILALLVIASAKNSQYLSVIPVLAGFFSYKVAVLIPLL
TGEAFE*
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