Ggra8393.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8393.t1
Unique NameGgra8393.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length231
Homology
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A2V3IKK9 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKK9_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 1.180e-88
Identity = 138/230 (60.00%), Postives = 167/230 (72.61%), Query Frame = 0
Query:    1 MGDLRDITTIRKAVNGCDGVISASGTRNFDAGSDNHPEAVDFIGLRTLANCFFESLMEQDLMMMFTGEADDFGHREEGEASPLQHASVATSEENQNHYIDSSRFVLISSLGVTRPEQFPQLQQMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFECVSPHPGLIEASQRKGFSPDMFNQLVPEDMN 230
            M DLRD  T+RKAV+ C GVISASGTRNFD    N PE VDF G++ L+ CFF++L+E DL +MF+ +A    H         Q   + T+ +NQ   +D SRFVL+SSLGVTRPE FP LQQM S+LT+KLCGEDAL+ESGCSFTIVRPG L D+     P+I+DQGDRIAGSISRADVA ICA+AIF  +ATNVTFECV+  P L + S  K FSP MF  LVPE+++
Sbjct:   99 MADLRDERTLRKAVSACHGVISASGTRNFDPADPNRPELVDFKGIQLLSQCFFDALLEHDLTIMFSDDAHRAEHPFNQTVHSHQQRPITTATQNQ--LLDPSRFVLLSSLGVTRPEAFPHLQQMNSLLTYKLCGEDALRESGCSFTIVRPGALVDVEPRQTPIILDQGDRIAGSISRADVAHICAEAIFRPTATNVTFECVATPPALTQPSSEKRFSPHMFEHLVPEELH 326          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A1Z4RBC2 (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4RBC2_9CYAN)

HSP 1 Score: 99.8 bits (247), Expect = 1.400e-20
Identity = 56/109 (51.38%), Postives = 74/109 (67.89%), Query Frame = 0
Query:  102 SRFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFE 199
            SRFVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG S+TI+RP  LT+  AG   +I++QGD I G ISR D+AE+C  A+    A NVTFE
Sbjct:  374 SRFVLVSSAGVTRPGRAGINLEEEPPAVRLNDQLGGILTWKLKGEDSLRESGISYTIIRPCALTE-EAGGKELILEQGDNIRGKISRDDIAELCVQALQNTQACNVTFE 481          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A1Z4J1J0 (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=4 Tax=Nostocales TaxID=1161 RepID=A0A1Z4J1J0_9CYAN)

HSP 1 Score: 98.6 bits (244), Expect = 3.430e-20
Identity = 60/138 (43.48%), Postives = 84/138 (60.87%), Query Frame = 0
Query:  103 RFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFECVSPHPGLIEASQRKGFSPD---MFNQLVP 226
            +FVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG  +TI+RP  LT+ P G    I +QGD I G ISR DVA++C +A+  K+A NVTFE        ++  +    S D   +F+QL P
Sbjct:  364 QFVLVSSAGVTRPGRPGINLDEEPPAVKLNDQLGGILTWKLKGEDSLRESGIPYTIIRPCALTEEPGGK-EFICEQGDNIRGKISREDVAKLCVEALQQKTACNVTFE--------VKEGENTASSIDWQRLFSQLQP 492          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A0A9CT88 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9CT88_ARUDO)

HSP 1 Score: 94.0 bits (232), Expect = 5.060e-20
Identity = 58/122 (47.54%), Postives = 74/122 (60.66%), Query Frame = 0
Query:   98 YIDSS---RFVLISSLGVTRPEQF-------PQL----QQMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFECVSPHP 205
            YI+ S   RFV +SS GVTRPE+        P      +++GS+LT+KL GED ++ESG  +TIVRP  LT+ PAG   +I DQGD I G ISR +VA IC  A+   +A   TFE  S  P
Sbjct:   47 YINESITPRFVHVSSAGVTRPERSGLDLSKKPSAVRLNRELGSILTYKLKGEDLIRESGIPYTIVRPCALTEEPAGA-DLIFDQGDNITGKISREEVARICVVALASPNAVGKTFEVKSTVP 167          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A8J7AB02 (CIA30 family protein n=5 Tax=Nostocales TaxID=1161 RepID=A0A8J7AB02_9CYAN)

HSP 1 Score: 97.8 bits (242), Expect = 6.380e-20
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 0
Query:  103 RFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFE 199
            +FVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG  +TI+RP  LT+ P G+  +I +QGD I G ISR DVAEIC  A+ L +A N+T E
Sbjct:  364 QFVLVSSAGVTRPGRPGINLDEEPPAVRLNDQLGGILTWKLKGEDSLRESGIPYTIIRPCALTEEP-GNKELIFEQGDNIRGKISREDVAEICVQALKLANACNITLE 470          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A8J7C065 (CIA30 family protein n=1 Tax=Iningainema tapete BLCC-T55 TaxID=2748662 RepID=A0A8J7C065_9CYAN)

HSP 1 Score: 97.1 bits (240), Expect = 1.190e-19
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0
Query:   99 IDSSRFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFE 199
            I   +FVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG  +TI+RP  LT+ P G   +I +QGD I G ISR DVA+IC +A+    A NVTFE
Sbjct:  359 ISLPQFVLVSSAGVTRPGRPGINLDEEPPAVRLNDQLGGILTWKLKGEDSLRESGIPYTIIRPCALTEEP-GSKELIFEQGDNIRGKISREDVAKICVEALEQSKACNVTFE 469          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A367QJT7 (NADH:ubiquinone oxidoreductase n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A367QJT7_9NOSO)

HSP 1 Score: 97.1 bits (240), Expect = 1.190e-19
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 0
Query:  103 RFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFECVSPHPGLIEASQRKGFS 217
            +FVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG  +TIVRP  LT+ P G   +I +QGD I G ISR  VAE+C  A+  K A NVTFE       +  +  +K FS
Sbjct:  364 QFVLVSSAGVTRPGRPGINLEEEPPAVRLNDQLGGILTWKLKGEDSLRESGIPYTIVRPCALTEEP-GRKELIFEQGDNIRGKISREHVAELCVQALQQKIACNVTFEVKEGENSINSSDWQKLFS 488          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A2A2TF25 (NADH:ubiquinone oxidoreductase n=1 Tax=Calothrix elsteri CCALA 953 TaxID=987040 RepID=A0A2A2TF25_9CYAN)

HSP 1 Score: 97.1 bits (240), Expect = 1.220e-19
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = 0
Query:  102 SRFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFE 199
            SRFVLISS GVTRP        E+ P ++   Q+G +LT+KL GED+++ESG S+TI+RP  LT+   G   +I +QGD I G ISR DVAE+C  A+    A NVTFE
Sbjct:  369 SRFVLISSAGVTRPGRPGINLEEEPPAVRMNDQLGGILTWKLKGEDSVRESGTSYTIIRPCALTEEVGGK-ELIFEQGDNIRGKISRDDVAELCVQALENTQACNVTFE 476          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A6M0AJ77 (NAD(P)H-binding protein (Fragment) n=1 Tax=Moorena sp. SIO4G2 TaxID=2607820 RepID=A0A6M0AJ77_9CYAN)

HSP 1 Score: 94.7 bits (234), Expect = 1.540e-19
Identity = 53/120 (44.17%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   99 IDSSRFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFECVSPHPGL 207
            I   +F++ISS GVTRP        E+ P ++   Q+G +LT+KL GE+A+++SG S+TI+RP  LT+ P G   V   QGD I G +SR D+AE+C   I    A NVTFE      GL
Sbjct:  172 ITKPQFIMISSAGVTRPGRPGINLEEEPPAVRMNDQLGGILTWKLRGEEAVRDSGVSYTIIRPCALTEEPGGQALVFA-QGDNIRGKVSREDIAELCVQVIEQPKACNVTFEVKEASDGL 290          
BLAST of Ggra8393.t1 vs. uniprot
Match: A0A252E7V5 (NADH:ubiquinone oxidoreductase n=4 Tax=Nostocales TaxID=1161 RepID=A0A252E7V5_9NOSO)

HSP 1 Score: 96.7 bits (239), Expect = 1.630e-19
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 0
Query:  103 RFVLISSLGVTRP--------EQFPQLQ---QMGSVLTFKLCGEDALKESGCSFTIVRPGGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFE 199
            +FVL+SS GVTRP        E+ P ++   Q+G +LT+KL GED+L+ESG  +TI+RP  LT+  AG   +I +QGD I G ISR DVAEIC +A+    A N+TFE
Sbjct:  364 KFVLVSSAGVTRPGRPGINLDEEPPAVKLNDQLGGILTWKLKGEDSLRESGIPYTIIRPCALTE-EAGGKELIFEQGDNIRGKISREDVAEICLEALLQPKACNLTFE 470          
The following BLAST results are available for this feature:
BLAST of Ggra8393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKK91.180e-8860.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A1Z4RBC21.400e-2051.38NADH:ubiquinone oxidoreductase complex I intermedi... [more]
A0A1Z4J1J03.430e-2043.48NADH:ubiquinone oxidoreductase complex I intermedi... [more]
A0A0A9CT885.060e-2047.54NAD(P)-bd_dom domain-containing protein n=1 Tax=Ar... [more]
A0A8J7AB026.380e-2050.00CIA30 family protein n=5 Tax=Nostocales TaxID=1161... [more]
A0A8J7C0651.190e-1949.11CIA30 family protein n=1 Tax=Iningainema tapete BL... [more]
A0A367QJT71.190e-1946.03NADH:ubiquinone oxidoreductase n=3 Tax=Nostocaceae... [more]
A0A2A2TF251.220e-1951.38NADH:ubiquinone oxidoreductase n=1 Tax=Calothrix e... [more]
A0A6M0AJ771.540e-1944.17NAD(P)H-binding protein (Fragment) n=1 Tax=Moorena... [more]
A0A252E7V51.630e-1950.00NADH:ubiquinone oxidoreductase n=4 Tax=Nostocales ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..214
e-value: 2.3E-31
score: 111.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..92
NoneNo IPR availablePANTHERPTHR15020FLAVIN REDUCTASE-RELATEDcoord: 2..204
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 2..188
e-value: 6.2E-20
score: 71.8
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:459316..460008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8393.t1Ggra8393.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 459316..460008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8393.t1 ID=Ggra8393.t1|Name=Ggra8393.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=231bp
MGDLRDITTIRKAVNGCDGVISASGTRNFDAGSDNHPEAVDFIGLRTLAN
CFFESLMEQDLMMMFTGEADDFGHREEGEASPLQHASVATSEENQNHYID
SSRFVLISSLGVTRPEQFPQLQQMGSVLTFKLCGEDALKESGCSFTIVRP
GGLTDMPAGHLPVIVDQGDRIAGSISRADVAEICADAIFLKSATNVTFEC
VSPHPGLIEASQRKGFSPDMFNQLVPEDMN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf